Array 1 90683-83769 **** Predicted by CRISPRDetect 2.4 *** >NZ_LMOM01000002.1 Deinococcus sp. Leaf326 contig_10, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 90682 37 100.0 35 ..................................... GGTCTGACCTTGCTCCTTCCGACTTACACGCCGCC 90610 37 100.0 36 ..................................... GAATGAAGGGAAGCCATTTCAGGTGAAGATCCGGTA 90537 37 100.0 35 ..................................... GGCACGGCGCACAACTGGTGCCGGGATCTACCCAC 90465 37 100.0 36 ..................................... GTCACCGGCAAGGGCCGGCGTGTCGACCAGGCTGAC 90392 37 100.0 34 ..................................... TCCGGATCAAGCACGGCTACCCCCCAGGCCTCCG 90321 37 100.0 35 ..................................... AAGACCTACATAGAGCAGCAGGCAGGCGAGGACAA 90249 37 100.0 34 ..................................... CGACCTCGACAGCCACCGCTACCAAGTTGCCCGA 90178 37 100.0 36 ..................................... AGCGTTGACAATGGCAGTGCAGCCATTAATCAGGGC 90105 37 100.0 35 ..................................... CCCAAGATTCCCGAGCTGCCTAAGACGGGCAACTT 90033 37 100.0 34 ..................................... CTGCGCGGCCAAGTCGCGCTCGTGGGCGGCCCGC 89962 37 100.0 36 ..................................... CGCGCCGATCACGAGATTCACTCCGTCAAAGCCGGA 89889 37 100.0 34 ..................................... TTGAGCTTCGAAGCGGCGTCAGCAGCAAGTCCGA 89818 37 100.0 35 ..................................... GCGCCGCACATTGGCGACGGCTTCCTGAGCGCCGC 89746 37 100.0 35 ..................................... TCGCGGCTTGTTGGCTGGTTACAGGGTGTCATTAC 89674 37 100.0 35 ..................................... TGGAGGAGGTGCAGGAGAAGGTGCTGGCCCACCTC 89602 37 100.0 36 ..................................... AGCACAGGAGATACACCATGAGCAATGCCTGGCCCG 89529 37 100.0 35 ..................................... ACGTCTGATGCGCGACAATCGCCGCATGTCACGGC 89457 37 100.0 33 ..................................... AATCTGACAGGTGATTTTCAGCCGGGCAGCGAT 89387 37 100.0 36 ..................................... TTTCACTAGAGTCCAGAAGGTGTCAGCGCCCCCCGA 89314 37 100.0 33 ..................................... CCGAGCCGGCCCCGGAGCGTTTCGTGGCGGCTG 89244 37 100.0 36 ..................................... CCTTGGTGATCACGCCGATGATCTGGGTCATATCCA 89171 37 100.0 36 ..................................... TGCGAGGTCTGCGGCCGGAAGATCCACGAGCGCAAG 89098 37 100.0 33 ..................................... TCGGACTCGTGGGGCCTCTGCCGTCGCTCTGAT 89028 37 100.0 35 ..................................... CGATGCTGAGAGATGCTGTGGGCCGTACCGCGCGC 88956 37 100.0 35 ..................................... CCCCCCTGCACTGCGGCGATACTGCCCAGCGCGAG 88884 37 100.0 34 ..................................... TTTGGAGCATCATGGCGGCGGCGGCGGCGGACAC 88813 37 100.0 33 ..................................... GGCCCACAGAGCGCCGGCCACGCGATCACCGGA 88743 37 100.0 34 ..................................... ACCTGGGTATTGCTCTGTGAGGACTGCGGCGCGG 88672 37 100.0 33 ..................................... TTGGCGTGTTAGTGCAGGTAGTCCTGCAAGCTC 88602 37 100.0 35 ..................................... ACCTCGGCGCTCGCTATCCGTGCCCGCCGTGACTC 88530 37 100.0 35 ..................................... ACCTTCCTAGCACCGCCCTACCAATCAGATGGCCG 88458 37 100.0 35 ..................................... TGCGGAGGGCTGGGAGGCGGTAGGGGCTGGCCCTG 88386 37 100.0 34 ..................................... AACGGTACGCAGGCGCTCGCCCAGGCCTTCGGGG 88315 37 100.0 34 ..................................... CTTGGCGGCCACCCGTACCCCCGCCTGCGCCGCG 88244 37 100.0 33 ..................................... TTCTTCGCCGACCTGCGCCAGCATATAGGCGGC 88174 37 100.0 37 ..................................... AGCGGTAGGCCCGTGCATCTCGAGCCCTGCATGTCCC 88100 37 100.0 34 ..................................... TACTGTTTTCAAGCAGAGGGGAGAAGCAGCCGGC 88029 37 100.0 34 ..................................... CCAACGATCGGGGTTCCAGATGCGCACATCACAG 87958 37 100.0 35 ..................................... AAGGCAATTCTCGCCACGCTCCTAGTGCTGTTGCC 87886 37 100.0 35 ..................................... TGGGATATGGGGCGGCCGGGCGTGTTCGAGCTGGG 87814 37 100.0 37 ..................................... CTCGTTGGTCATCACGCTGATCCGGGCACGCAGGCGG 87740 37 100.0 34 ..................................... ATGCTGACCCTGCCCCCTGAACCTAAGACGACCC 87669 37 100.0 34 ..................................... ACGTCTCCTGAGTCATCTGAGCGCCAACAAACGT 87598 37 100.0 33 ..................................... GGCGAGCTGAGGCGTGAGCCGCTGGCCTATCAA 87528 37 100.0 35 ..................................... GACCGACTGGCACCGTCATGCTCTTACCGACCGGC 87456 37 100.0 35 ..................................... ACCTGGGCGGGTTGGCCGTCAGCCTGCCGGAGCAT 87384 37 100.0 35 ..................................... TGTGGTGAAGCTCGTGACCTTGACCTCTGGCAACT 87312 37 100.0 36 ..................................... ACGCCCACCGGGTACGGCGCGTTCGTGCGCCTGCGC 87239 37 100.0 35 ..................................... AAATTCCACACAATCACTAAAACCGTCCCCATCAG 87167 37 100.0 32 ..................................... TTTGATTCGCGCGCCGACAATCGTGTCGGTGC 87098 37 100.0 37 ..................................... CTGCCCGCCCCCGTGGTGCGCCTCCTGCTGCCCTCTA 87024 37 100.0 37 ..................................... CAGGCGTTGTAGGCCCGGAACGCCGTACCCTTTCGAC 86950 37 100.0 35 ..................................... CTCCGGGGTGTAGAGGCCGTCAATCACGTCCGGGA 86878 37 100.0 38 ..................................... CTCCCCCCGCAGGCAGTGCCAGTTATCTTCAGCGGAAT 86803 37 100.0 34 ..................................... ACTGCTGGGGGACAAAGACGAACGACTACGGCGA 86732 37 100.0 35 ..................................... CAGTGGGTTTTCCGGCAGATGACTGAACATGTCCA 86660 37 97.3 35 ....T................................ TGGCGCGGGGAGGAATACCTGCCCGAGAAGTTGGC 86588 37 100.0 32 ..................................... CTTGCTTTCGGAGTCGGTGTCTTGTGACTGAC 86519 37 100.0 33 ..................................... AAGCCAAGAAGCAATGACCTGGGCACACCGCAT 86449 37 100.0 34 ..................................... ATGCTGGTAGGGCTGAACAAGCCCCTGGATGCCC 86378 37 100.0 35 ..................................... TTCTGGGAATCCTGTTTAGTCGGATTGGTAAATGA 86306 37 100.0 33 ..................................... GTCGGCATAGCTGGAAATGTCCTGAATGGTCTG 86236 37 100.0 34 ..................................... ATACGGCGCGTGGCCGCCCATTTTGATCCGAAAC 86165 37 100.0 34 ..................................... AACACACGTGTTCGTCAACTGTTCGACCTGCTGT 86094 37 100.0 33 ..................................... CAGATCGGGAATGCGCTGGAGCGGGCGCGGCGC 86024 37 100.0 36 ..................................... ATGCCAGTAGTCGCCCGTGTTCACGGTGCCGCCTGC 85951 37 100.0 35 ..................................... AAGACCGAAGGGGCGCTCGTGTCAGGGTTCGACGC 85879 37 100.0 33 ..................................... CTTAGCTACCAAAACCTTCTGCCATGCGCTCAC 85809 37 100.0 35 ..................................... AAAATTCTCCCGACCCGGTACGAGCTGGTGACTGC 85737 37 100.0 34 ..................................... GAAGGTGACCAGGCCGGTCTCGGTGAGGCTGCGC 85666 37 100.0 35 ..................................... TAGCTGTTCGGGCGGGAGGCGCACCGCGTAGCCAT 85594 37 100.0 32 ..................................... ACGGCGATGAGGCCAGTCTTCCCCTGCCCCTC 85525 37 100.0 35 ..................................... ACGCCCATCCCGTAGCGCATCTCCGAGAACCATTG 85453 37 100.0 35 ..................................... ATGTCCTGCCTCCTTGAAATTAACCTTGACTGTTG 85381 37 100.0 36 ..................................... AACCCAGTGCACATGGCCCCGGAGTAGCTGGTCGAA 85308 37 100.0 35 ..................................... ATCAGCAGCGCTGGCGCCAACGCCCCGCACGCGGT 85236 37 100.0 39 ..................................... TCCCACGCGGACGGCGGCACCACGTGGCCGGTCAGCACC 85160 37 100.0 35 ..................................... AAACCTGCGTCTTTTGCTTCCAACGGCGGATCGAC 85088 37 100.0 33 ..................................... ACCCCTGTCAGCCGCCTCACCCCCGACCAACTG 85018 37 100.0 33 ..................................... GTCGAGGGCCACACCTACACCTACGGCCCCAAG 84948 37 100.0 35 ..................................... ACCAGGGTTGGTCCACAGCGTCACTGCGCGCCGGA 84876 37 100.0 34 ..................................... TAAGGGCTATAAGGCGGATGGTCAAAAATGGGCC 84805 37 100.0 37 ..................................... GCCCTTCTTCACTTTCCCCGCCGCAACATCGGCGCGC 84731 37 100.0 34 ..................................... CCTGCACTGCACTGCACGGCCCAGCACGCTCCAT 84660 37 100.0 32 ..................................... GGTAGCGCTGGCCGCTGATGACAACAGCATTG 84591 37 100.0 36 ..................................... ATGGGTGACCGTGCGCTGGGGCTGGGTGATGAGGTC 84518 37 97.3 34 .......T............................. TTTACGGTAGCTTCCGCAAGTGCTAATTTGGCAC 84447 37 100.0 35 ..................................... CCGCCCCAGCCCAGGAGGGCACCCATGAGTGACCG 84375 37 94.6 31 .G..................A................ ACTGTAGAGCCGGTGAACAGCACTCAGCCGG 84307 37 97.3 36 .G................................... TGGAACACCATGATCCGCTTGATCAGCCCGACCGCC 84234 37 91.9 35 .G...A..........A.................... AATGACGGAAAGATAGGATTCTGCGTATCTACCCG 84162 37 97.3 35 .G................................... CATCGGGCGCTGGCTATGTCCACCCGGAACGGCAC 84090 37 91.9 35 .G..T...........A.................... ACGAGTGTTGACCGGCGCTGGCGAGACGCCCGCAG 84018 37 97.3 36 .G................................... AGCAGGTATCCGGCGCAGGTGAGAACGTTGGCGCGG 83945 37 97.3 35 .G................................... GGGCGCTGCACCGTCACCTACACCGTGCGCTACCC 83873 37 94.6 32 .G....................A.............. TCCTGTACGGTGTCGCTCTCCTAGCGATATCC 83804 36 89.2 0 ..GT..-.................G............ | ========== ====== ====== ====== ===================================== ======================================= ================== 97 37 99.4 35 GTCACGGCCTGCCTTCGGGTGGGCCGAGGATTGAAAC # Left flank : ATCCGCCTTACCTACATCGATGATTGATCTGCTGATCTGCTACGACGTCGGAACGACAACTGAAAGCGGCCGCCGGCGTCTGCGTCGCGTGGCAAAGGTATGTACCTCACACGGTCAGCGCGTGCAGAACAGCGTTTTTGAGGTCAGCGTGACTGACGTCCAGCTTCTGACGCTGCGTGGAAAATTGCTCGACATTCTGAATCCGATGGAGGATAGTATCCGTATCTATCGTCTGCGTCAGCCCCGTGAGAAATTTGTGGAGGCGTTCGGACGTGACCAGTATGTGGACTTTACTGACGCACTGATCCTGTAGGTCGTCTCTTGTGCGAACCCCCCGCGACGGACAGATGCCGGGGGGTTCGCGTTGTCCCAGGAAAGCGTCTGGGACGCGTTGCATGACAACATAAAGAAAGGAATGCCTAGAAGTTGAAGTGGTTCACAGTAGGTTCGCAGAATATGGGCTGTAAACGTCGTCTCAGTACGGCTCGAGTACCATAACT # Right flank : GTGAGCTTCTATGGCTTCAAGACCCCGAGTGACAGTCACAACCTGCCTTCGGTTGGACGGATTGAAGCGATGAGGAAGGCACGCAGGCCGAGCGCGTCGGCCGGGGTGAGCTGCTCGGCCGACAGGGGGGTGGTGGGGGAGTCCGGCAACATGGTGATCACCAGCGGGCGCGGCCCGCAGCGTTTCGAGTTTGGCGCGCAGGGCAGCAATCTCCTGGTCCTTCGTTTCGAGTGCGGCATTCAGAGTGGCCACGAGCCCCTGCGCGGTCTTCTTGTCGCGCTCCAGCTGACCGCGCTCGCGGTTCCAGGACTTCTCCTTCCCCAGCAGGGCGCGGCGCTCGAAGCTGATCTGTTCCCGCTGCTGGTCGAGCTACCTCTTGCGGAGCGCGTTCTCCTCGCCGAGCCGGGCGGCCTGCACAGCCAGGTCGTGCTCGTGAGCGGCCCGCACCTGTACGAACTGCTGCTGGCCTTGCTCGTCGAGCATGACGGGGCCGCGTGGGG # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACGGCCTGCCTTCGGGTGGGCCGAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [7,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-8.80,-15.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [17-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [43.3-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : NA //