Array 1 1664196-1664826 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CP078162.1 Enterococcus faecalis strain NS2 chromosome, complete genome		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                      	Spacer_Sequence              	Insertion/Deletion
==========	======	======	======	=====================================	=============================	==================
   1664196	    37	  94.6	    29	...............C....................G	AATTGATAATTGAAGCCTTAACAAGTAAT	
   1664262	    37	  91.9	    29	.......C..............T.............T	GATCCAACCTGTCAGAAAATCCACGATCA	
   1664328	    37	  97.3	    29	...............C.....................	AGGTATTGCTACTGTGATTGGATATAAAT	
   1664394	    37	  97.3	    29	.........................A...........	AACGGCAATCATGTTCTCTTTTGCTTCTT	
   1664460	    37	  94.6	    29	............C.......................T	TTCTATACGATTGTTTTCTGTAAAATTAT	
   1664526	    37	 100.0	    29	.....................................	ATAATATTTGCATCCAATTTCCCAAGCGT	
   1664592	    37	 100.0	    29	.....................................	ATAATATTTGCATCCAATTTCCCAAGCGT	
   1664658	    37	  97.3	    29	....................................C	TAATATTTGAGCTGTTCGTTCTAACTTAT	
   1664724	    37	  97.3	    29	....................................G	ATTTGGTATACCATGTAGACATTGCAACA	
   1664790	    37	  97.3	     0	....................................C	|                            	
==========	======	======	======	=====================================	=============================	==================
        10	    37	  96.8	    29	GTTTTGGTACCATTCTAAACAACATGACTCTAAAACA	                             	       

# Left flank :   TTCTCGCCAATGTTACAATATCAAACATATTATTTCCTCCCTGATTTGCCTCCACACAAAGAAACAAGCTTACCTGAATTGTTCATTTCCATTAGCGATGACTCCTTTTATCTACGAAACTAAAAGAAAATTCAAGTGAACTTTTCCAAAAAGTGTGAAAATGCATGTAATATAGAATAATTCCAATCTAAGTATACAACTTTCTGAGGCAGAAACCAAACAATACAGAAGCATTTCTCACAATTTTTTTAGGTGCTCCCAAGATTTCTTCCCTTTCTTCTATCAATAAAAAAAGCCCTTCCTAAAAAAAGGAAGAACTAATCTCAATCTATCAACATTTTGACTTATCACTTGATTAGTTCCCAAAAATTGAAGCAGCTCGTCTTTGATGATAAAAATTCTAATCTTGTGATGAAAATTACGGATTGCTTGAGGTGATAGTTTGTTTTTTAACAACATGACTATAAAACAGGGGAGAAAAAGCCAAATCAAAAAAGTTT
# Right flank :  CTCGGAGAATTATTTTTTCTCCATGATTCCGTATTCGCATCACTTATCCATAGCTAGATTTCAGTTTAGAAGGTCTGAATTTTTTCTTCACGTTTATTATACCAAACTTTCTTCTTCTTGGCGGAAAAACCCACCATTTTTCAATGGTGGGTTTTCTTTATTTAGTAGCTGTAACAGCGAGCCAGATTTCACTATACTTAGCTTCTGCTGGTCCTTGATATTGCGTAAACGAAATTTCTGGTGCTGCAACGACTTGGTAACCAGATGAAGGCAACCATTCAGAGAATATCCTTGCCCAGGTTTCTTGTAAAGTTTGAGGGAAAGGACCTTCATTTGGAAAAACCGCCCATGTATGAGCAGGTACGCTTAGTTGCTCCAAATCTTCATAGGTATTTTCTTGCGAAGTGGCAAAGCCAATCATGTGTGTCATTTCTCCACCTTCTGTTGTTCGTCCCTCTTGAAAGTCAAAAGAAGCATTTACTACTTGATAAGGATATACA

# Questionable array : NO	 Score: 5.46
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.84, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.36,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTGGTACCATTCTAAACAACATGACTCTAAAACA
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:67.57%AT]
# 	Reference repeat match prediction:         F [matched GTTTTGGTACCATTCTAAACAACATGACTCTAAAACT with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  NA [0.00,0.00] Score: 0/0.37
# 	Array degeneracy analysis prediction:      R [5-1] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [71.7-63.3]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [4.5,0.41   Confidence: HIGH] 

# Array family : II-C [Matched known repeat from this family],   
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