Array 1 235048-235938 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JAHZQC010000001.1 Streptococcus gordonii strain SK186 Sgordonii_SK186_DanaHsu_Sia_YES_1, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                 	Spacer_Sequence                     	Insertion/Deletion
==========	======	======	======	================================	====================================	==================
    235048	    32	 100.0	    35	................................	ATGAACACGATTTGAGAACTATCATCAAGACTTTT 	
    235115	    32	 100.0	    33	................................	TAAAGTATCTAGCTGTAGGTTTGCCTACTATCC   	
    235180	    32	 100.0	    34	................................	TTAATTGATTATAGTTATATTATACACCCCTTTT  	
    235246	    32	 100.0	    35	................................	TTTTCCATCAACTTTAACAATAGCAGTAGCAGTTC 	
    235313	    32	 100.0	    34	................................	ATAAATCTTGATTTTGGTATCAGTTAAAGACTTC  	
    235379	    32	 100.0	    36	................................	TAAAACTAAGGTCTTTAAGTCTAATTTGGACGGAAC	
    235447	    32	 100.0	    33	................................	AAAAACTTAGCCATGCCATAGACCATATTTAGT   	
    235512	    32	 100.0	    33	................................	ACAAAGTAGACAAGATACCAGATAGCGAGCGTG   	
    235577	    32	 100.0	    34	................................	TCTTCGTGAGAAGTATCCTCAATGCTGAATACGT  	
    235643	    32	 100.0	    33	................................	ATTGCGATTGCAGATTTCAAAGCAGACTTATCA   	
    235708	    32	  96.9	    35	...A............................	CTCTTGACGCTTCTCTTGAATACTCAGCAATTTCG 	
    235775	    32	 100.0	    34	................................	AAATTGAAGTTAAGCGCTCTGGATTTCCCGTGAA  	
    235841	    32	 100.0	    34	................................	AAACTTCTTGGAACAACATTGTCAATGCGTTTGC  	
    235907	    32	 100.0	     0	................................	|                                   	
==========	======	======	======	================================	====================================	==================
        14	    32	  99.8	    34	GTCGCTCCCTTCACGGGAGCGTGGATTGAAAT	                                    	       

# Left flank :   CCAAGACAATCCGTGGAGAATTGGAATCCTATCCACCGTTTTTAATATAGGAGCCGGTTTATGATGGTATTAGTAACATATGATGTGAATACTGAAACTGCGCAAGGCAGGAAAAGATTACGTCATGTGGCAAAATTATGCGTTGATTATGGGCAACGCGTTCAGAATTCAGTTTTTGAATGCTCAGTAACTCCTGCAGAATTTGTAGAAATAAAAGCTAAGCTTTTGAGTATAATTGACACTGAGTCTGACAGTATTCGTTTTTATTTGCTAGGAAAAAACTGGCAAAATCGCCTAGAAACAATTGGACGTGATACAAGTTATGATCCTGATATAGGCGTACTACTCCTTTAAATTACTTAGTGCGAATAGTGGTTACTCATAAAAAAGTAGGGCATTCGCGCGAAAAACAAACAAAAATAAGGTAAAAATTCAAAAATATAGAGGAGTTATCTCTCCTTGAAAAATAATTTTTACCTAAAACAGTGCAATTACGCGCT
# Right flank :  TTCAATGATTGATCGTGTAACTCGTCTATGCTATAAGGTAGCTTCCTTCATTTTGAAAATTTTCATGAACCCAAGATACTTATTTATTATTTATATAATATATTTAGTTGTTCTCTTTCATATCTATCCAAAAAAAACCACCTATTAGGTGGTTTTTTTCAGTATCTATCACTGCTTACTAGAAGAACTTGAGCTGCTTGAGCTGTCGCTGCTGGATTCAGAACTGTCTTCTGAGGAGCTGGTGCTTTCAAATTGTTCTGGGTGAAGCGCTCGATAGCTTGGAGCATCAAAGAGGTCAATGGTCGATTCGCCCTTACGTTGGCTATAGAGACTGGTTGATTGGTCTCCTTTTTCTTCCTCGATTTTCTTCAATGCTTTGAAAGAGTGGTTGTAAGAGTATTTCTTGACATCTACCTTGCCCAAGTCATTACCCTCGTAGAAGCGAATCAAGTCACCGGTTTGAATAGCGTCACTAATCTTCAGCTGAGTATTGGCAGCAT

# Questionable array : NO	 Score: 9.25
# 	Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTCGCTCCCTTCACGGGAGCGTGGATTGAAAT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         F Score: 4.5/4.5
# 	A,T distribution in repeat prediction:     R [6,8] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched GTCGCTCCCTTCACGGGAGCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-6.40,-5.80] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-1] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [66.7-66.7]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [9.78,0.37   Confidence: HIGH] 

# Array family : I-C [Matched known repeat from this family],   
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