Array 1 1718-1986 **** Predicted by CRISPRDetect 2.4 *** >NZ_PNHQ01000043.1 Aerococcus viridans strain UMB0240 ERR1203655.17957_1_67.43, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================================= =========================================== ================== 1718 41 100.0 30 ......................................... ATCAGTAAGCGCATCTGAGTCAGCATCAGT 1774 41 100.0 43 ......................................... CAGCATCAGTAAGCGCATCTGAGTCAGCTTCAACAAGCGCATC 1862 41 95.1 43 ..............C..A....................... TTCAACAAGCGCATCTGAATCAGCATCAGTAAGCGCATCTGAG 1946 41 100.0 0 ......................................... | ========== ====== ====== ====== ========================================= =========================================== ================== 4 41 98.8 39 TCAGCATCAGTAAGTGCGTCTGAGTCTGCATCTGAATCAGC # Left flank : CATCAGTAAGCGCATCTGAATCAGCATCATTAAGTGCGTCTGAGTCAGCATCAGTAAGTGCGTCTGAGTCTGCATCTGAATCAGCATCAACAAGCGCATCTGAATCAGCATCAGTAAGTGCGTCTGAGTCAGCATCTGAATCTGCGTCAGTAAGCGCATCTGAGTCAGCGTCAGTAAGTGCGTCTGAGTCAGCATCTGAATCATCTTCAGTAAGTGCATCTGAATCAGCATCAGTAAGTGCGTCTGAGTCAGCATCTGAATCAGTATCAGTAAGTGCGTCTGAGTCTGCATCTGAGTCAGCTTCAACAAGCGCATCTGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Right flank : ATCAGTAAGCGCATCTGA # Questionable array : NO Score: 2.60 # Score Detail : 1:0, 2:0, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TCAGCATCAGTAAGTGCGTCTGAGTCTGCATCTGAATCAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.22%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-6.30,-2.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [0.0-16.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.27 Confidence: MEDIUM] # Array family : NA //