Array 1 80387-84973 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABFQU010000004.1 Streptococcus sp. zg-36 Scaffold4_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 80387 36 100.0 30 .................................... TGTGTCAATAGCTCGTCCAGGTATTCGATT 80453 36 100.0 30 .................................... TGAGTGGCAGAAAAAAGAGATAAAGCGCTT 80519 36 100.0 30 .................................... CTGCAAGTCCGCCCGCCTGTTCAATGAACG 80585 36 100.0 30 .................................... CTTGGCAGGTCAATCTTTTACAGCCAATCA 80651 36 100.0 30 .................................... GGTCAAAGCCCATAAGGGATTTCATTTCTT 80717 36 100.0 30 .................................... GCATCCTTGAACTTGACTTTTGTTCCATCA 80783 36 100.0 30 .................................... TGTCACCTGCTATAAAATGCACTCTAACAA 80849 36 100.0 30 .................................... TTAATAGGTTACTTGTATATTGCTGCTCTT 80915 36 100.0 30 .................................... AAGTTAAAGGTAGTTAGTAGGAAGCACGTT 80981 36 100.0 30 .................................... ATACTGTAGAGAGCCATACTCGGACGATTG 81047 36 100.0 30 .................................... CACTTCATCTGAGTATATAATCGCAGCCTT 81113 36 100.0 30 .................................... GAACCATTGCTATTCTAGCCTTATCCTCTT 81179 36 100.0 30 .................................... GAGACACTCATATTCTGATGTGCATGTGTA 81245 36 100.0 30 .................................... TTCTAGCTTCTACTGGTTTAAGAACACCAT 81311 36 100.0 30 .................................... AGTACGGATTCACAAGTTTGGCGATTTAGA 81377 36 100.0 30 .................................... TAGAGTTAGCTTTTTGGTCAATAGCGGAGA 81443 36 100.0 30 .................................... AATTCTTGCCGTACGATTTCCAAGATGTTT 81509 36 100.0 30 .................................... ATAAGGAACGATATACGCTTGCCCTAAACT 81575 36 100.0 30 .................................... TTGACGATACGATTTCGTTCAAACTGGATA 81641 36 100.0 30 .................................... CGCTGTACGATGGTCCATGCGCAGGAGTTA 81707 36 100.0 30 .................................... CTTGCGTGGAATCGAGTGTTTGGTGGAATA 81773 36 100.0 29 .................................... TGCGATACCATTCAATAACAGCATCTCTA 81838 36 100.0 30 .................................... ACAAGAGCTCTATTTCATTCATTAACTGAT 81904 36 100.0 30 .................................... TAAAAAAGTAAAAAAGCCTGACGGCAATCA 81970 36 100.0 30 .................................... TTGAAGCTGGATTGATGGAACGGTATTTGC 82036 36 100.0 30 .................................... CTTTAATTCTATTAATGTAAAGTACTGACT 82102 36 100.0 30 .................................... TAATTTTCGGTTCAGTAGCTCGACGTTATC 82168 36 100.0 30 .................................... CAAAATCGCTATTTCTACATTCTCCCTAGT 82234 36 100.0 30 .................................... CTTGCGTGGAATCGAGTGTTTGGTGGAATA 82300 36 100.0 29 .................................... TGCGATACCATTCAATAACAGCATCTCTA 82365 36 100.0 30 .................................... ACAAGAGCTCTATTTCATTCATTAACTGAT 82431 36 100.0 30 .................................... TAAAAAAGTAAAAAAGCCTGACGGCAATCA 82497 36 100.0 30 .................................... TTGAAGCTGGATTGATGGAACGGTATTTGC 82563 36 100.0 30 .................................... CTTTAATTCTATTAATGTAAAGTACTGACT 82629 36 100.0 30 .................................... TAATTTTCGGTTCAGTAGCTCGACGTTATC 82695 36 100.0 30 .................................... TGGTGATAGTATGTTGCCACGCTACGAACC 82761 36 100.0 30 .................................... AAGATACGAGTCAAACCGTCCCAAGCGGAT 82827 36 100.0 30 .................................... GTTCCGTTAGTTATTCATGTGCACGTCAAG 82893 36 100.0 30 .................................... CGAATATCTGGACGAGCTATTGACACAGCA 82959 36 100.0 30 .................................... GGACAATCGCTTGTTTTGTGAGATTGTCAA 83025 36 100.0 29 .................................... TAGCTTCTCTGCTTCTGCTAACGCAAGGC 83090 36 100.0 30 .................................... GTCATGACTAAAAAAGAAATTGACGCATCT 83156 36 100.0 30 .................................... CCAAAAAAGAGGTTAGCCATGAAACAGAAT 83222 36 100.0 30 .................................... TTACAGAAGGTTGGATGAACGATAAAACGT 83288 36 100.0 30 .................................... CGCCTAAAGTTACGAGTGTAGCCACCAACT 83354 36 100.0 30 .................................... TGATGTGAACGAACTATCCTCCTTCCGTAT 83420 36 100.0 30 .................................... CAACTAATTTACTGCCAAACCAGGGCGAAG 83486 36 100.0 30 .................................... TACAGGCGAAACGGAGACCCTGAAAGACCT 83552 36 100.0 30 .................................... GTAAGGGAAGACCATTCCATTTTATAGTTC 83618 36 100.0 30 .................................... CGTTTGCCTAGTAATTCCGCAGCCTTGATT 83684 36 100.0 30 .................................... ACTGCATTGTTTCAATCTTGTCTTTGACTT 83750 36 100.0 30 .................................... TTTCACGGTCAGCTCCTTCCGTCTTTCCTT 83816 36 100.0 30 .................................... GACGTCGGTAGAACGCATATTTCGCCCTAA 83882 36 100.0 30 .................................... ATGGCGACTATCAAAACATGCTGTCAATCT 83948 36 100.0 30 .................................... CAATATCTCCGACAAAGTAAGCTGTACCAG 84014 36 100.0 30 .................................... TTGAAAGCATGATAAAAGAAATCGCCTTAC 84080 36 100.0 30 .................................... TTGAAAAGGTGACGTATTGGACGAAGGAGC 84146 36 100.0 30 .................................... GTTTACCAACGCAAAACCTCTGACGGACCA 84212 36 100.0 30 .................................... ATGTTTATAAGATTGGAATGACTAGACGAT 84278 36 100.0 30 .................................... TTACGAAAAAATCAATTATTGTTAAGTCTT 84344 36 100.0 30 .................................... ATTTCCCAAAAAGACAAGCACTCCGATACT 84410 36 100.0 30 .................................... TACAAGTTAGTCATTACCACAAGAAAAAAC 84476 36 100.0 30 .................................... CACCATTAATAGCGGGATTCGACTGTTGAA 84542 36 100.0 30 .................................... CGGTATATCACCGTGTCTAAACACAATGCA 84608 36 100.0 30 .................................... TATAATAGATTTACCAGTTATTACATCACA 84674 36 100.0 30 .................................... TTTATTTTGTTTTGTATTTCGGTATAATTT 84740 36 100.0 30 .................................... GCGGACTTCTAGCTTTTGTCGCCCTCTGGA 84806 36 100.0 30 .................................... AGGAACCCCCAAAGGCGCTGCAGTTGATAT 84872 36 100.0 30 .................................... AATGGTATTTTTACAAAAACGCTTCAAATC 84938 36 97.2 0 ...................................T | ========== ====== ====== ====== ==================================== ============================== ================== 70 36 100.0 30 GTTTTAGAGCTGTGCTGTTTCAACTGATTCCAAAAC # Left flank : TCAGTTGAATGAAAAACCTGAAGTGAAATCTATGATTGAGAAATTAGCATCAACTATTACAGATTTGATTGCCTTTGAATGTTTGGAGAATGAATTGGATCTAGAATATGATGAGATTACTATTTTAGAGTTGATCAAGGCATTAGGAGTACAGATTGAGACGAGGAGCGATACAATTTTTGAAAAATGTTTTGAAATTTTACAAATCTACAACTACCTACAGAAAAAACGGATACTTGTCTTTTTCAATATTGGAGCTTATTTAACAAGAACAGAGCTAGTGAAGCTATTAGAATATATTAGCTTATCGAATCAGACAGTCTTGTTTTTAGAGCCTAAGAAATTATACGATTTCCCACAATATATCCTTGACCAAGATTATTTCTTAACTGTTGAACATATGGTATAATAAGATAGAATAGTTGGAATCGGTTGGAACGAGAGTCTAGCTGAGACGAATGGCGCGATTACGAAATCTAGTAAAAAATTTTTTCTACGAG # Right flank : TTGAAACTTAGAATGATTTTCTAACAAGTATAAATGGATTGGGTGTCAATCTTAATTAGAGGAGTATTTTATTCTAAGATAGTCATTCCTCATAATGATATATTTATTTAATGAGGAACATGGTGAACCACCTAGAGCGATCTAGGTGCTTTTTTCATACAAATAATCTACAGGGAATGGTCTGTATTGTTATTAGTAAATCAGCATGCAGGTGAATGACTAGATGGTGCTTTCCTAGTCATTTTCCACTCTTTTTGGTATAATAAAGAACGGAAAATACAAGAAAAGTTTGTATCTTGTTGTGCTGAATATAGCTTAGGTATTGTGTAAAAAAAGACAGAGCTGTTCTAGCTTTAGTTAGTTGCAGTCTTGCCTCCCTTTAGAGAGAATCTTTCCTAGAATCAAGGAGATTCTTCGTCAAGATTCCTAATTTTTCTGTAGCTGTTGCGAGCTTGCTCGCTTTACAGATACGGATGCCCTAAGGGTATACAGTATGTTTT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGCTGTTTCAACTGATTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: F [matched GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC with 92% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-1.30,-3.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [61.7-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.64 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], // Array 1 4588-3498 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABFQU010000007.1 Streptococcus sp. zg-36 Scaffold7_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ===================================================== ================== 4587 29 100.0 40 ............................. TTACTGTTTTCATGATATTCATGAGGTTTCCTTCTTTCCT 4518 29 100.0 38 ............................. GAAATCAAAATCAGAAAAATCAACTGTTTTTTCAAAAT 4451 29 100.0 42 ............................. TGAATAGGAAGTTCATTTGTGACTTCAACTGGAGCAGGTGTG 4380 29 100.0 46 ............................. TTAATACGTTTGAACGTTTTGTTCATGATAGGTTTCCTTCTTTCCT 4305 29 100.0 43 ............................. TGTTTCAAGTGTTACTGTGTATGACATAATTTATTTCCTCTTT 4233 29 100.0 38 ............................. GCATGAGCGCTGTAATATTCATAATATTTCCTCCTTAT 4166 29 100.0 43 ............................. AAACGGCCTTTAGTGATTTGAACATGATGTTTCCTTCTTTCCT 4094 29 100.0 38 ............................. TCAAATCCGAAAAGAGATTTTAAAGTAAATGTAAATGT 4027 29 100.0 38 ............................. GTATTCACTAATGTGTCCACCTGGTGAACATACGATTC 3960 29 100.0 53 ............................. TTGCTCCTTAGCCACGTTAACTAACGATTGGATTTGGCGTTCGATGTCTGTGT 3878 29 100.0 38 ............................. AGTCTGTCTTGGTTTTTGATTTTATCTAACGCTTCAAC 3811 29 96.6 37 ...............C............. GCTTTAAAAATTCGTTTTTGAAATACTCAATAAACTG 3745 29 100.0 46 ............................. AATTTAGTTTCCGTTTTCTTTCGTTTCATGAAAAATACCTCTTTTT 3670 29 100.0 43 ............................. CAAGTTCCACTAGAACTTTATCTTCGTTAGATTGAATAATTGG 3598 29 100.0 43 ............................. CAGCAATAAGAACTTGATTTGCAAACATAATTATTTCCTCTTT 3526 29 82.8 0 ......................AAA..TT | ========== ====== ====== ====== ============================= ===================================================== ================== 16 29 98.7 42 GTATTACCTTACCTATAAGGAATTGAGAC # Left flank : CACGCTTCGAACAATCGGCCTTATTCGCTTCATCTAGATTTTGCTGATTATTTCAAGCCTATTATTGTTGATAGGGTCATATTGTCTCTGATTAATAGGCATCAAATCCACATGCCACAACACTTTGAATATAAGGAAGATGGGGCGGTGTGGCTTAATTCAGCTGGTAAAAGAATCGTTTTGGAAGCTTTGGAGAGCAAATTCCATACTCGGCTCGTTCTGAAGCATACCACCTATACCTATCATCAGTTAATACAACGTGATGTTCAACTGTTTAAAAAATTTATTTTAGGTGATAGGGATGTAAAGCGCTTTACACCATTTAAATACTACTAAAAGTCGGTCGAAGATTTTATAAATTGTATTGCAATTTATAAAACAGCAGTAGCAAGCTTTTTGCCTGCCGACCATTAAGCGATTGACCGACTTTTAATACGAAATACTTGAATAGTTTGCATATTTGTACTATAATTAAAGTGTTGACTGCCCTACTTGCAGTT # Right flank : ACTTATCTTGTCTTAGCAGTGTGTAACTGGTGCATTTCATTCTTGACATCATAAAAAATCAGAGGAGGAACTTGAATCCGACCTCTGATTGTCTATTTCTAGAAAGGAGTTACCACTTGTGGTAAAATCAGCCTATAGCTACCATGTTTTTATTCTTCCTTTTCTATTGAAAGGCATAAACAAGGGAGCAATAACAACAAAACTCACTCGCCAGAATTGGGAGCGAATACAAGTCATGGGAGAGTTGCCCTATTTAAGAGAGGATGAAACCATCCACTATGCGCATCATTTCTATTTCAATAAGGAAGCAAAAGAATTGATTCACAGCCCAGTTGTTGAGGGCAAGGAGACAGATGAATTTTCCTATCTCGTTGAAAATTATATTTATAAACCCACTTCTGAAAAGGAATATTATTATCGGATTTCTTATTTTGCTTCAGATGCTGTAGCAACTAGCTCACTTCACTTTTTTGACTTGAAAGTTGACTATATTTTATTGC # Questionable array : NO Score: 3.16 # Score Detail : 1:0, 2:0, 3:0, 4:0.94, 5:0, 6:0.25, 7:-0.03, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTACCTTACCTATAAGGAATTGAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.52%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.80,-3.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA //