Array 1 278855-276967 **** Predicted by CRISPRDetect 2.4 *** >NZ_QFWJ01000003.1 Marinospirillum perlucidum strain F3212 contig3, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 278854 28 100.0 32 ............................ TCAAATCACTGGGGATCACGCAAAAGAGACGC 278794 28 100.0 32 ............................ AGAAGTTCATCCACGAAGCAACAGGCCGCAAA 278734 28 100.0 32 ............................ AAAAGCGGCAAAAGCCGATCAGTGCCTATCCC 278674 28 100.0 32 ............................ ACTGGAGCACGTTGGAGCGAAGCCGAAGGCCT 278614 28 100.0 32 ............................ CCAGCCGGTGAGCTGTTTGATGACATCTGGCA 278554 28 100.0 32 ............................ AGACAGTGGCCGAGGTGAAGAAGCGGCTACGC 278494 28 100.0 32 ............................ AGAGCCATGGCTTAGTCCTCTAAAAATATTAC 278434 28 100.0 32 ............................ TGCGAGCACTGAACCCCGCTTGGCCAGAGCAG 278374 28 100.0 32 ............................ TGGCTCGACATTTGCGTAAGCGCCTGAGGACT 278314 28 100.0 32 ............................ ACTGAGCCGCCTGCATGATGATGGCCATGCAG 278254 28 100.0 32 ............................ TTGCAGAAAATACTGGGTCATTCTGACATTAG 278194 28 100.0 32 ............................ GGCAGGCGAACGCAGTGAGCTGTCCGCGTTGA 278134 28 100.0 32 ............................ TGTCAGCACCGTAGCGGCCCCGGTATAAATCA 278074 28 100.0 32 ............................ CCCGAACACTGGGCAGCCAGGACGGGCCAGAC 278014 28 100.0 32 ............................ AGGGAGTCAGTGGTAACCGTCGGTGTCAGGCG 277954 28 100.0 32 ............................ ATAAAAAAAGCCCGCTGGGTGCGGGCTTGATT 277894 28 100.0 32 ............................ TCAGCATGCATAATCCAAATGGGGATCGCAGT 277834 28 100.0 32 ............................ TTTTGCGGCGGACTTTTTCGCTTGTTCAAAGC 277774 28 100.0 32 ............................ GGCTACGATGTCGAAAGCGGCGGCATCAAAAC 277714 28 100.0 32 ............................ TAACCAAGAGGTCCGCGAAACCAAGGCGTTTT 277654 28 100.0 32 ............................ AACTGTTTGAGCTGCGGCACCCCAACCCTGAA 277594 28 100.0 32 ............................ AGTCAGAGTTTACCGCTTACCTTTTTGACATT 277534 28 100.0 32 ............................ AGATCGGTAATTTCCCGGCCCGGTGAAGATTC 277474 28 100.0 32 ............................ ACCACAACAACAAATAATGAGCAAAATCAAGT 277414 28 100.0 32 ............................ ATACCACCACAGCCCCAAAAAAGGCAATAAAA 277354 28 100.0 32 ............................ ATTTCCTGAATCGTATTTTTTACGCAAGTCTA 277294 28 100.0 32 ............................ ACGTGGCGTTTTCGCCTTTTGGTACTGGCTCA 277234 28 100.0 32 ............................ TGCTGGAAGAGTGGAAAGACCGAGACCCTGTA 277174 28 100.0 32 ............................ ACAGAGCCTCCCTGAACACGATACAGAAACTG 277114 28 100.0 32 ............................ TTTGAGGAGCGCATGAAGCGCGAGAAAGCCAT 277054 28 100.0 32 ............................ AGCGCTTGGCTTCAAGATTGCGATGCCTGTGC 276994 28 82.1 0 .....................A.TCG.T | ========== ====== ====== ====== ============================ ================================ ================== 32 28 99.4 32 CTTCACTGCCGCCCAGGCAGCTCAGAAA # Left flank : CGGACCTGGAACGCCTGATGGAACTCAATTGGATCAAAGGACTCGGTGACTATACTGCTACCACCGAACTTCAGCTCGTACCTGCTGATCTGCAGCAAGTAAGAATCAGACGAATTCAAAGCAAAATGACTGCCGCAAGAATTCGCAGAAGCGTAGCAAGAAATACCGACAAAAGCCTGGATGAGCAACAAGCAACCGAGCTATTGGAAAAACGTCAGCCGCTGAAACTGCCCTATCTAATGCTCAAAAGCCAATCAACAGGGCAACAGTTCCCACTGCACTTTGAACAAAAAGCAGTTGGAACAGAAGCCGTCTCCGGCACTTTTAATAGCTATGGGTTCAGCCAGACGGCAACCTTACCCTGGTTTTAACCCTTTTTTTCTGGCCACATAAAAAGCCTGAAAAATCAGCTGCTTGGCCAGCACTCTAAAAAATAGGGTTGCTGGCTTTTTTTCATTAAAGCTCTTTAACAATGAACAACTTATCAGGTAGGATCTCTA # Right flank : TAGTCCACCAACCTAGCTTTTAGCAGGTCAATCAGGCTTTGGTTTTTGGGGCTGTTGGCTGCAAAGCTGTTTTCATCCTGGAAGATGCCGAATTCATTACCCTTGTAGGCAAAGTAGTGGTAATGGATGCCTCGGGCGTCCATCAGGTCCATGAGGTCAGTAATCCAGCCTGCTGCATTTTTATCTTGGTACCTTTGCAAGTCATCACTTTTCTGACCGAATTCCCCGACATGAAAAGGGTAGTTGTTGTAGATCACCTGAAATTCTGACATGGCGTTTTGCAGGGCGGTGTCATCCACATCCTGATCGTAGACGGAGGTGGCGTGAGCGGTAAATTCACTCCAGGGATCATAGATATGGATGTCGTAGATCAGCTGGTCATCATAGTCTTCGCCTTGATCATTTTTTAGCAGGAAGTTGCTGACTTCAGCTGCATCATTAAAGCTGTGCTCAATCATCAGGGGGCGGGTGGTGTCGATTTTGCGAATGGCATCGATGGT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCACTGCCGCCCAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTTCACTGCCGCCCAGGCAGCTAAGAAA with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //