Array 1 100836-101316 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JADQUB010000004.1 Corynebacterium diphtheriae bv. gravis strain 08-14 NODE_4_length_254950_cov_48.029832, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence             	Insertion/Deletion
==========	======	======	======	====================================	============================	==================
    100836	    35	  77.8	    27	.GACAC.C..-...................A.....	TCCTACGGCTCATCTCCGCTGGCGCGG 	
    100898	    35	  94.4	    28	G................-..................	CTTTTGAGCAGCTCGCAGGCGCGGGCCG	
    100961	    36	 100.0	    28	....................................	TGGGTGCATGTATCCCCACTGGGGGCGA	
    101025	    36	 100.0	    28	....................................	TGCAGCAATGGAACTAGCGCAGACGATA	
    101089	    36	 100.0	    28	....................................	CCATCGGTGGTCTTTTCTACTCATGGTC	
    101153	    36	 100.0	    28	....................................	TGGTCGGCTACTTCTGGGCCGTAGAGGC	
    101217	    36	 100.0	    28	....................................	TATGTGGCAGTTAACGCCGCCGACCTTG	
    101281	    36	 100.0	     0	....................................	|                           	
==========	======	======	======	====================================	============================	==================
         8	    36	  96.5	    28	ACTGGGGTTCAGTTCTCAAAAACCCTGATAGACTTC	                            	       

# Left flank :   AGGCGCTCTTGTTGACTACGTGGCCACCATCACGGACTTTGATACGCAGCGCGTCGAGGAAGATCACGGGGTAGAACTCGTCTAACTGGCGGTTTTGCCACACCATTACTTCATCAAGTACTGCATCTGTTACTGCAGAGATGGTATCACAAGAGATGTCCACCCCCGTCGTGTCCGCCACTGGTCAGTTTCTCATGTCCGCTAACAATCCCACCGGCATACAAACTCACGATCAAGCCATCGACATCCGTTAAACGCCTCGAACCTTTCGGGACCATGGTGGGAATATACGTCCCAGCTCTATCCCGGGTACCGTTGCGATAATTGTCGATCCCAGCAGCAGCTTTAGCTTCCCGATCACCGGATTGATAGCCAAGGTTAGCAAGCAGCTTTTCCTCAGGTCGTGCCAATCTTGGCCTTATCGGCTGGGTCTCGTCTTGCCACAGTAGCCATTCTGACTTATCTCCTTATGCGGAATGGAATCCCACACACAAACCATC
# Right flank :  CAGGTAGCCCAAAAAATCCTGTTTAACTTGGTTTTTTGGGCTACCTGAAGTCTAAAAAATCGCGAGTTGATCAGGCTTTTCTTCGCCAGAAACCTCTGCAGAAGAAGAAAAACGGATCATCTTCGACCATTGGATGTCCGATACCGAAAGGATTCGAACATCCCCACCTGGGGGTAATTTTTCTTTAATTAATTTCACCAAATTAGATAACTTTGCGGCCAGAGGCAGGTACTGCACATATACACTCAGCTGTGCCATACAGAATCCAAGATCTAAAAGATTCTGACGAAACGCCGTTGCTTGCTTTCGCTGAGTCTTTGTCTTCACCGGAAGATCAAACATCACCACACACCACACCGGATCGCTACCTTTCTTCGGCATCGAAGGGACCTTCCCAAATAGGCGGTACTAATTTCTCAACATCACCTTCCACATACCGCCCATACTGTTGAGCGAACGCGGTAAAAACCGTCGGAATTGACTGCCCCGCAGAATTGAAA

# Questionable array : NO	 Score: 6.06
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.82, 5:0, 6:0.25, 7:-0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     ACTGGGGTTCAGTTCTCAAAAACCCTGATAGACTTC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:55.56%AT]
# 	Reference repeat match prediction:         F [matched GCTGGGGTTCAGTTCTCAAAAACCCTGATAGACTTC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-1.20,-3.20] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [10-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [53.3-63.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [4.5,1.05   Confidence: MEDIUM] 

# Array family : II-C [Matched known repeat from this family],   
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