Array 1 1784991-1787037 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP027234.1 Bacteroides heparinolyticus strain F0111 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== =============================== ================== 1784991 47 76.6 30 AAGACAG...TT.C...G............................. GAAACGTGTGAGTTCTATCCGCATTTCGAT 1785068 47 100.0 29 ............................................... CAATATTACGCATTATGATTGACCTGTGC 1785144 47 100.0 30 ............................................... TAAGACTGCCCCTTTCAGCGGCTTTACGAA 1785221 47 100.0 30 ............................................... ACTTCTTAGACTTTCTTGTTCGGCAGAAGA 1785298 47 100.0 30 ............................................... GGCTTTTGCTTTTGGACATCTCCCGATTTC 1785375 47 100.0 29 ............................................... CTATTAAAGACCAGTTAAAGGAATTGGGT 1785451 47 100.0 30 ............................................... GACTTTTGGCTGTCAAATTCTTTGTTTCGC 1785528 47 100.0 30 ............................................... GCAAGGGTGGTAATGTCATCGCCTACTGCA 1785605 47 100.0 31 ............................................... CATCTCTCCGGAGAGGTATGATGCGGATAGC 1785683 47 100.0 30 ............................................... TCCGCTGGCGCGTAATGTTTTAGAGGTGTC 1785760 47 100.0 30 ............................................... AGGATGCTTGTGGAGAGTAACGGCCAATGC 1785837 47 100.0 30 ............................................... GCGGAGGTGGAGAGTCCGAAGAGGAACGCA 1785914 47 100.0 30 ............................................... GTCCCAATCGAATGTATGATTGGTCTTGAA 1785991 47 100.0 30 ............................................... ACCTCGTGGCCAAGTGGGCGATGAAAATCC 1786068 47 100.0 30 ............................................... GAAGTCGCTGCTACCGTTGGCGAACATGGA 1786145 47 100.0 30 ............................................... GGCAACCATCTCCCTACGTACCAATGGCAA 1786222 47 100.0 31 ............................................... CTCCGCCACCTCCATTATCATGCCGCACACA 1786300 47 100.0 30 ............................................... CAAAACGCTCGAGCTGCTCGAGGTGAAAGA 1786377 47 100.0 30 ............................................... GGCTCTGAGTGGGAAGTTCTTATCAACTGT 1786454 47 100.0 30 ............................................... TTGTAACTACAATTCTTGATCAGCCTATTG 1786531 47 100.0 29 ............................................... TTCTGGTGCTTTGTGACTACAAGAATGAT 1786607 47 100.0 30 ............................................... TTTATAGCCAACACGATTATCCTTCAGGTA 1786684 47 100.0 30 ............................................... TCCTTTCTGAACATCATCCAACGTTTTTGT 1786761 47 100.0 30 ............................................... TCTTCGTCTTTTTCTTTCTTTTTCTTCATA 1786838 47 100.0 30 ............................................... ATAGCGTATAGAACCTCAACGTATCGTTCG 1786915 47 100.0 29 ............................................... AGAGATATACGACCGCAAAAAAGACTCTA 1786991 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== =============================== ================== 27 47 99.1 30 GTTGTGATTTACTTTCAAATTAGTATCTTTGAACCATTGGGAACATC # Left flank : GAAATGATTATCTTATCATCGGCAGAAGAGAATGATCTGACGGTTCTTAAAAGAGAAGCTGCTGACATCCTTATAAAAAGAAAAATCTTCGCTGATAAGATATACTCGGATTTCTCTTACTGGAGGAATAAGCAGCAAGAACAAGGAGTAACTATGCTAACTCCCGTAAAAGCAATAAAAGGGGAGGCTCCGGTTATTACTCAAAGAGAGAAAGCCGGAAGAGACCTGTTCTCTACTGCTGTTTCAAAGGTCAGACAACCCATAGAGTCGTTTTTCAACTGGCTGAATGAGAAAACAAATATTCAAAGAGCGATGAAAGTCAGATCAACATCCGGACTTTTAGTACATACGATGGGAAAAATTGCCATCGCATTCATTTATCTAATTTTTTAAAACAAGAATCAGAGACCAACTACTGATTCGCATTATTAGTTAGAGATTAGATTTAGACATAAGAATAAAACATTGGCATTAGCCTGTCATTGACGAAAATCTGTTCA # Right flank : CATAATCCTCATAACACATTACTTTCCAATGAGTTAAAAAACAACCAGAGAAAGAAAAAAGAAGAGTGTTTCCAGCCCAAAATCTCGCATCAATGCGAGATTTTATTTTCTAAAACAACTCTAATTGCTGTCCAGGTGTATTGACATTCTGCACCTTTTTTCCATAAAAAAGTTCTATATCTCCAAATTGTTTGTCTGTAATACACATGATTCCAACATGCCCAAATTCCGGGAGAAAAGATTTAACTCTTTTTATATGTACTGCCGCATTCTCGCTACTGGCACAATGGCGCACGTAAATGGAAAACTGGAACATCGTAAAACCGTCCTTTTGCAGATTCTTTCTGAAATCCGCATAAGCTTTCTTTTCTTTCTTCGTCTCAGTTGGCAAATCAAAAAGAACAAGCACCCACATAATACGATATTCACTAAAGCGATCCATAATCTATCGTTCGGGATAAGCAACTCTACGAAGCTCTCCATTGAAACATTTATAAAGC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTACTTTCAAATTAGTATCTTTGAACCATTGGGAACATC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.09%AT] # Reference repeat match prediction: F [matched GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.40,-3.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [11-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.78 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], // Array 2 2810988-2812274 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP027234.1 Bacteroides heparinolyticus strain F0111 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ===================================== ================== 2810988 35 100.0 33 ................................... CCCAACGACATTCCCAACATTGTCCACATTAAA 2811056 35 100.0 35 ................................... TGCAAACAGAGTTAGATTGACTCTGTTGAATATTT 2811126 35 100.0 37 ................................... AATACAGTAAGATTGACCATGTTAAAGGTCTTTATTT 2811198 35 100.0 33 ................................... AAATTTAATATTACACAATTGACTGATTGCCAC 2811266 35 100.0 37 ................................... GAGGTTTCTTCTCCAGATTCTACCTCCTCGTAGAACC 2811338 35 100.0 34 ................................... TCAGGTTTTTTTATTGCAAACGGTTGCGACGAAG 2811407 35 100.0 35 ................................... CTCATACCTCCATTACGGAACCGCCGTCAATTTAA 2811477 35 100.0 37 ................................... TGCAGGGGATTGTTACCATCGTACTGCATACTTCCAT 2811549 35 100.0 34 ................................... AGAATATAATATGTAAAAGAACAAGAGTTTATCT 2811618 35 100.0 35 ................................... GACAGGCATATACAGCCGTCTTATACTCGTTTAGA 2811688 35 100.0 33 ................................... ACAAGAGATTAGTTTACGTTCTTAAGACAGGCA 2811756 35 100.0 35 ................................... TTCCCAGCTTCATCAACCGGAAATGCCTTTTCCAA 2811826 35 100.0 34 ................................... TTTTATTTTCATTATTTTTTTCATTTATCAAAGA 2811895 35 100.0 32 ................................... AGTCTACATTTTTGAGACAGGCATATACAGCT 2811962 35 100.0 34 ................................... TTTTTAAGCATTTCTTTAAATTTTCCTGCATATT 2812031 35 100.0 36 ................................... TTAACATTTTTTTTATTTAATAGTTAATTGTCACAA 2812102 35 100.0 33 ................................... TTGCAAAGGATAATGATTCTGATAGTGTATTTT 2812170 35 100.0 35 ................................... AAAAAACATATCTGTTTCCTCCTATACCTTGTTGT 2812240 35 97.1 0 ..................................T | ========== ====== ====== ====== =================================== ===================================== ================== 19 35 99.8 35 ATACAGTCTACTTCCATCACAACAAGGATTAAGAC # Left flank : AGTCTACCAGCCCGATCGTCGTCATCCTCCTGAAACGGTGCGGATGGTATAGAAGGGAGGAGAAATCATTTGCGAAAATTCAGAAGATGCGTAATAGGTTGATAATAAGAGTAAAGCTGTTTTTCCGATGAAAGGACATCTACGCAAACCATTCGCAAATCCCCACTCGATGCCAAAAGACCACCGCCTTTTGCGAAAATTCCTGTAGGTCTGTTTGCAATCTGTTTATAATCAGAGGTATATGCGGACCTAAAAGCGACGATTTTCGCAAATCCATGATGAATGCAAATGGCTCGTTCTATTTGCGAAGTTTTTTTAGTCGCAATCTGTTGATTATCAATGGAAGTATAAAAACGTATGGCAAAATCCCCTTTTTTTGTATTCAAAAAAACAGTACTTTTGCGAAGATTTTAGAAGAAATAGCGTAAAACGATAAAATACAATGATTTATATCCATAGCTTATTGCAAAGAGTTACAGCAACATATTGATAGTCAGAAT # Right flank : TGGATGCATATCCTACAGAAGAAGAACGTCAAATGGGCAACCGCCGTAACGGTAAGATGCAGAAACAGGTGCAGACTCCATTGGGTGAGGTAACCGTATCCACTCCCCGTGACCGTAATTCAAGTTTTGATCCACAATTTATTAAGAAGCGTGAGACCATTCCGGCAGAAGGTGTTGCTGACCGTATAATCGGCCTGTATGTTCTTGGTAACAGCACACGTGAGATTAGTGATTGGATGGAAGAGAATCTTGGTAATCGTGTATCGGCAGATACAATCAGTGCCATTACGGACCGTGTACTTCCGGAAATAAAGGCATGGAAATCACGTATGCTTGATTCCGTCTATCCTATAGTCTGGATGGATGCCATCCATTATAAAGTAACGGATGAACGTGGTTGTGCTGTTGCACGTGCAATCTATAATGTGTTGGGTATTAACAGGGAAGGACATAAGGAGCTACTCGGAATGTATATATCAAGAAATGAGGGAGCAAACTTC # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATACAGTCTACTTCCATCACAACAAGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.00,-1.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0.37 Confidence: LOW] # Array family : NA //