Array 1 482235-482874 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CP084925.1 Ligilactobacillus salivarius strain AR809 chromosome, complete genome		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                  	Insertion/Deletion
==========	======	======	======	=============================	=================================	==================
    482235	    29	  96.6	    32	......T......................	ATTATTATCAATTGCAATATTATCCAAGTAGG 	
    482296	    29	  96.6	    32	......T......................	TAAACGTATTGAACAACAGGAACAAGCAGCAG 	
    482357	    29	 100.0	    32	.............................	GCAAGCTGCGTTCGAAGATGCAACAACTGATG 	
    482418	    29	 100.0	    32	.............................	AAGCGGTGGCTTGTTAGACATGATTAACAACA 	
    482479	    29	 100.0	    32	.............................	GTATACCGTTCAAACGTTAGCAGTTTTATGAC 	
    482540	    29	 100.0	    32	.............................	ACTGATGGGTTTAGTAGGAATTTCCTATTAAA 	
    482601	    28	  96.6	    33	........-....................	TAGATAAACTAGGAATGTATTTTCTGGATTATG	
    482662	    29	 100.0	    32	.............................	GTTGTTCGTGAACATAACCAACGCATTACAAT 	
    482723	    29	 100.0	    32	.............................	ATACTTCTACACCTTTCTTTAGTTGAATTCCG 	
    482784	    29	  96.6	    32	..............A..............	GCTGTTGCATTGTCTAAACATAAAACTTGATA 	G [482801]
    482846	    29	  82.8	     0	..............AA...A......TA.	|                                	
==========	======	======	======	=============================	=================================	==================
        11	    29	  97.2	    32	GTGTTCCCCATGTATGTGGGGGTGATCCT	                                 	       

# Left flank :   TTAGAGAAAGATAGTATCATATCAATAGGTGCCGTTAAAGTAGAAAATAATAGCAAGCATGACTATTATTCCCTTATTAAAGGTATAGAAGAAATTCCGGATGAAATCAGTGAGTTAACTGGTATAGGAATCGATGATTTGAATAAAGATGGTGAAGATATATATAAAGTTTTAAAAGTATTGTATGGGGTTTTAGATGATGCTGTTATTATTGGGTATAATCTTAATTTTGATCTTAATTTTCTTAATAGAGAATATGAGCAATATACTGAACTTAAGTTAATAAATAAGGTGATTGATTTACTTCCAATAGTAAAAAAACAGTGTCGTTTTTTAGATAATTATCGCTTAGAAACGGTATTGCAATATTTTGGTATAGAAAATTTTCATCCACATAATGCATTGGAAGATGCTAGGGCTTGTATTGAATTGTATGAGAAACTAATAAAAAACAAATAGTAGTAACTTCAAAAAGACTGATTTAATAGGGATATTTTACT
# Right flank :  TTTAGAAAAATTAAAGAAGTAGGGGCTTAAGTCATATTTCTAAAGACTTTATAATATAGGTTATAATGTCCTCTGAGTATACAGATGAAATAGAAAATACGTCTGGCGAAGAAAATCTAAATATTCAGCTGAATAAGAACTATCATTACTTAATGAAATTTCATATATCGGAATCTTTGAAGTAACAATTAAGTATGAGATCGATTATAAAACTATTAGACGATGGAGACTGCTTTATCAGTATCAAGATCTTCAACCAAGTAATAGAAATCAGAATTATTCTAAGGAATTCAAGTATTTATTAGTTGAGCAATACAAATATTTAAACGAACCTGCGAAACTATTTGCAATAAAAAAAGATCTACGTTCAGTGATTCAGTTGGAAAGCTTTTTCCATCTTTTTAAAGTTGAATCACAGCCTGAAATAAAGAAATGTAAGAGTATTTCTCAGTTCACACAGTTCTTTAACAAGTATGTCAATTGGTACAATAATGATCGAA

# Questionable array : NO	 Score: 6.12
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTGTTCCCCATGTATGTGGGGGTGATCCT
# Alternate repeat :   GTGTTCTCCATGTATGTGGGGGTGATCCT

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [3,10] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched GTATTCCCCATGTATGTGGGGGTGATCCT with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-9.50,-7.40] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-8] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [78.3-75.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.28,0.37   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
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