Array 1 87859-89446 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACVBA010000004.1 Stenotrophomonas sp. STM01 NODE_4_length_261972_cov_48.239367, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 87859 28 89.3 32 C.GA........................ CATGACGAGCTGATACCCGCTGCCGTAAATGC 87919 28 100.0 32 ............................ ACTGCGCTCGCTGTGCAGCGATGCCCACCAGC 87979 28 100.0 32 ............................ TGGTGAGTTGATCCGCGAAAGCGGTCGCGATC 88039 28 100.0 32 ............................ TTCATGAAGATGGCGAATTCGCCAGACGGATA 88099 28 100.0 32 ............................ ATCTGGCGCTGCTTGCGGATCGCGGCTTTTTC 88159 28 100.0 32 ............................ TCAATGAGTTCTACGCCAAGGCCGCGCTGTTC 88219 28 100.0 32 ............................ GATGCTGCAGCTGCGGCTGCCCAGCTCGCCCT 88279 28 100.0 32 ............................ CTTGCTCGCTGCATCAGGACTACCGAACAGGT 88339 28 100.0 32 ............................ CAGGATCTGGCCTTGAACCAGTCGCGGCATCT 88399 28 100.0 32 ............................ ATCGACATAGGTGCGACATGGGCCGCCCGTCT 88459 28 100.0 32 ............................ AGCACCGGCGGCACATCCACACCAATCGTTGC 88519 28 100.0 32 ............................ TGCTCCGTGAGCTTCACGTCGCCGATGTTGTA 88579 28 100.0 32 ............................ GTAACAGACTGCCCACAGGGGGCCAGAGTGAA 88639 28 100.0 32 ............................ TCACCCCGAGGCCGAGGGATGCAGAGATGAAC 88699 28 100.0 32 ............................ GAGGTGGACGCGCGCCTGGTGCAGCGTGGCTA 88759 28 100.0 32 ............................ ACTTGCGCATCAGCGTTTCCTTCAGGCTCGCG 88819 28 100.0 32 ............................ AAGGGAAAGTACGACACCACCGTCACTGTCGG 88879 28 100.0 32 ............................ TATGCGATCCGTCGTACCTACGTGATCCTGTG 88939 28 100.0 32 ............................ ACCATGCGCTCCCTGCCCTTCGGCGGGAGGGT 88999 28 100.0 32 ............................ TTGCCGTCGTACAGGACGTAGCCTGATTGGGT 89059 28 100.0 32 ............................ ACCTTGAGCGTATTGCGGCTCACCCGATGGGT 89119 28 100.0 32 ............................ GCTGGGCTTCTTCCAGCTCGCTTGCTCGGTCG 89179 28 100.0 32 ............................ CTGACGCACCTGTGCAGTCGCGGCCTTGTCGA 89239 28 96.4 32 ..........A................. ATGGACTTCGACCTGATCTTGTCGATCTCGGC 89299 28 100.0 32 ............................ ACTCCGCCTTGATGGCCTGGCCGTTCTGGCTG 89359 28 100.0 32 ............................ TTGTCGATCCAGCGGCCGGCCCACTGGCGCTG 89419 28 92.9 0 .....................C.....G | ========== ====== ====== ====== ============================ ================================ ================== 27 28 99.2 32 GTTCGCTGCCGCGTAGGCAGCTCAGAAA # Left flank : GGCCATTGGCTGCGATCGACCAGGACCAGGCCTTCGTGGGCTGGAAGTACCCCCACGCCGCATTGATCGGCGTGCTCCCCCAACAGCAACCCTTCCGTCAGCAGACGCTGCAGATGACCACGCTGGTGTTCCTGCCCGAAGAGGATGGCGAACGGCTGCGCCTGCATCGTGTCGAGGAAGCGGCCAGCCGGCACGCCGATTCCCAGCGGATCCTGATCGACCAGAGCCTGCGCACCGATGTCACGCTCCACGTGGGTCCCGGCATCAGCCCTTGGGGAAGGTTTGACCTGATGGCATTGCTGGAAGACCAGGCCGCCCATTCCGGCGACTCCCTGGACCACTGCGCCCAACGCTTCACCACGGTGGAGGTTCCTGACAGCCCGACGGGCTGGCGGTGGCATCCGCTGTTGGGGTTTTGCACCAAGTTGTGAGTGGGCATCCCTGCCCCAGCTGCCTACGCGGCAGCAAACTGAACGATCCGCGCTCCACGCCTAAATTTT # Right flank : GATATCAATGCCGAAGGATACGACGGCCTTGGGCCTGGCTGCACAGACGGCTCAACAGGCCCGCGCTCCGCGCCAGCTCGCTCTCGCCAGATTCGCAGCGGGAATCGTCAATCGCCGTCGAAAGTCCTGCTGTGCACTCCGCCGCCCATGCGCATGAATGCCGGGAACCGGTCTGCCGCGGGTGCCCAAGCGCATTCCGCATCGCCTTTGCTGCCGTCCCTCCCCTTACCCCTTATCATTCCCTCCCCCCCTTGCCGGCTTTCCCCATGACCGCCCTGCGCCCCTTCCTGGACAAGATGCCCGTCATCGGCGAGCGCGTTTACGTGGACCCGGCCTGCACCATCATCGGTGACGTGGAAATCGGTGATGACGCCTCGGTCTGGCCGGGCGCGGTGATCCGTGGCGACGTGAACCACATCCGCATCGGTGCGCGCACCAACGTGCAGGACGGCACGATCATCCACGTCAGTCATGACAGCCCCTACAACAAGGGCGGCTAC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGCTGCCGCGTAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCGCTGCCGCGTAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [3-3] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [40.0-40.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.24,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //