Array 1 177874-181262 **** Predicted by CRISPRDetect 2.4 *** >NZ_FJEZ01000004.1 Legionella pneumophila strain 2531STDY5467464, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 177874 28 100.0 32 ............................ TAGATAATTGTTTTGCACCTGTTGCAAGTCTA 177934 28 100.0 32 ............................ GACAGACCCAAGCTACACTGCTGGTAGAGTTT 177994 28 100.0 32 ............................ AGCTTCACAATCACTAACACACATATTGTGTA 178054 28 100.0 32 ............................ TGTAACCTTGATTCTTGACTATTAAAATCCCC 178114 28 100.0 32 ............................ ATATAAGAACAATCGAAGTTCCAAATGTGGAA 178174 28 100.0 32 ............................ CCAAATTAAGCAGCATTCTTCAATACTTTTAC 178234 28 100.0 33 ............................ CCATATGATACGCAGACAATTGCATTTTTTGCT 178295 28 100.0 32 ............................ TTTTAACAATGCGTTGTTCATTGCGTTTATTC 178355 28 100.0 32 ............................ TAGTATTGTAACTGGTCAGTTTAGGTCTAATT 178415 28 100.0 32 ............................ TTTAGAGATATGTCATTTGTTTGACCATCAGA 178475 28 100.0 32 ............................ TCCAATGAAGAAGCCTAGAGAAACAGACACAT 178535 28 100.0 32 ............................ CACACCCACAATAAACGTCATTGTCTTTGTGC 178595 28 100.0 32 ............................ ATTAGTTATTATTAATCGTGATGATTACCGAG 178655 28 100.0 32 ............................ TCTGAGTTAGAGCAACTTGAAAAACAAATACA 178715 28 100.0 32 ............................ AATAAGTAAGATTTTCCACATCCTGGGCCACC 178775 28 100.0 32 ............................ ATTAAGTCAAATAAAGTTAAGAAATTTAATTT 178835 28 100.0 32 ............................ TTATGGAACGACAGCATGTAAATGGGATACAG 178895 28 100.0 32 ............................ GCTAGTTTTCCAACTTAAACTAATTCCTACTC 178955 28 100.0 32 ............................ AGCAATGAATTTGATAGGCTAGCGGTCATTTA 179015 28 100.0 32 ............................ TATTAATAATATTTTAGAAGATTGGCACATAA 179075 28 100.0 32 ............................ ATTTAAAATCAGGGTGAACCTCAAAAGGAATC 179135 28 100.0 32 ............................ CTCATGACCTTTAGCCGTAGATATAAAAAGAT 179195 28 100.0 32 ............................ TCAACGCCCTGCGCTCAACAGGATTAACCTTG 179255 28 100.0 32 ............................ GACTCCTCAACTATCTGTTCAATTGGTTTAGG 179315 28 100.0 32 ............................ ATCAGCGAGGGAAACATCAGTTCCTCCGGTTA 179375 28 100.0 32 ............................ TATAGAGTCGAATAATACTTCTCCTCAGTTTA 179435 28 100.0 32 ............................ GTGTATATGATTTAACGCTGATTTCATGGGGT 179495 28 100.0 32 ............................ TTAATAGTTGTCTGATTATCTTATAATAAAGT 179555 28 100.0 32 ............................ AGTTTCTATCAGGTATCGGCGGGTAATCATAA 179615 28 100.0 32 ............................ TTTGGACGTTTTATCCTCCACAGTATGCCAGT 179675 28 100.0 32 ............................ TACACTCATAATTGAAAGTAGTGCAAAAATAA 179735 28 100.0 32 ............................ TATGGTGACGACTTAAACGAAGCGTTAAACGC 179795 28 100.0 32 ............................ TACATGCAAAAAGGCGGTAAAGCATGGCAATA 179855 28 100.0 32 ............................ TAAAGCCGCCGGAGCTGTCACTACGTCATTCG 179915 28 100.0 32 ............................ AATAAGATGAAAAGTTGTTGACAAAATGTACT 179975 28 100.0 32 ............................ ATATACCAGCGATAAAGGAGGAACTATTAATC 180035 28 100.0 32 ............................ ATCTAAAAATTGTTGAACAGTTGGAATTGGCT 180095 28 100.0 32 ............................ AACATGGACTAAAATATCAAGAGGCATAGCTT 180155 28 100.0 32 ............................ AAAGAAGAACATAGCCAGCCTACTAGCCCTTA 180215 28 100.0 32 ............................ TTAACAGTTAATCTTTCAACATCAGATAAACT 180275 28 100.0 32 ............................ GTCAGTTGTTCGATAGTTATCGATTATAAAGC 180335 28 100.0 32 ............................ TATAGGCGTGAAACAGAGCGTTTATTGCAGTG 180395 28 100.0 32 ............................ ATATACCAGCGATAAAGGAGGAACCATTAATT 180455 28 100.0 32 ............................ TCATAATTTGGAATTGGGGTAAAATGCTCGCC 180515 28 96.4 32 T........................... AATGTCTGATGGATCGATCATACAAAGCCCAA 180575 28 100.0 32 ............................ TAATGTGCCAACAAAATACAAGTCATTGACAA 180635 28 100.0 32 ............................ GAGATATTATCTTTGAAATCCATTTACCGCAG 180695 28 100.0 32 ............................ GTTTATTCGCCAGTCTCGCACCAGTATGTATT 180755 28 100.0 32 ............................ TTGTACAATGCCATCAGCTAATACATCTGTTT 180815 28 100.0 32 ............................ AAGATGAGACAACGCAGGCCAATAAAAATCAA 180875 28 100.0 32 ............................ ATCTTCAAAATATTCATAATCATTGGATTCAA 180935 28 100.0 32 ............................ AACATGCGCACGAATTAGCCAAGTTTGCAATA 180995 28 100.0 32 ............................ GGTAAGCCTATGTCCTCGACCAGACGGTCATC 181055 28 100.0 32 ............................ AAAAGATGAGGCTACAAAGTCATTAATCAAAA 181115 28 96.4 32 .............T.............. AAATCCCCAAAATCGCATTTGAACTGTAAATT 181175 28 100.0 32 ............................ GTAGGAATATTTATATTGTATGTTGTTGATGA 181235 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 57 28 99.9 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : CGGTGTCTCGTAAACAGCCTACAATGAGCCAATCAAAATTGAGGCGGTTAATTAAACGTAACTCCTTGACAGAAGATGAAATCAGGCAATACAAGGCAAAGATGTTTTCCAAAGGTCTGGATAATCCATATATTGAACTTGTGAGCGTATCAAACGGGCAAAGGCACCGACGCTATATTGAGTTTGGCGAATTGTTCAATGAGCCAATTCCTGGCCTCTTTGATCAGTTCGGCCTTTCTAACAGTGCTACTGTTCCATGGTTTGATTAAATTTTAGAACAAGGTAAATTCCTTGAGTTCGATAGGTTAAAGTAAGGAGATATAGTTTGGTCAAATGCTTCAATACTTGATTATTTCGATACTTCTAACGACCAATAAATTTAGTTCTTTAAAAATTTGTCTTAAAATCAATTGGTTATAAATTAGCTGAAAGATATTGGGTAAATCGATTTTTTTCAGCTAACTTTCTGTTGTAACTATTTTTTTAAGATTTATATTACA # Right flank : AAAGCACGTACGTACAGGGTCAGATCTTGCTTTTTGCCTTTATCCATAAAAGACGACAAGCTTGGAATTACCGCTTGATAATTATTTCCCAATGCATTAATTTTCTATCAAAAGGAATTAAGCAAGTCCAGGAACAGCGATGGTAAGACCTTTGCGTATTGAGTATGCTGGTGGGCTCTATCACATCACCAGTCGAGGGAATAGAAAGGAAGCGATCTATTTATCAGATGAAGACAGAGAGAATTTTTTATCTGTTTTGGGTGATGTTTGTTTAAAATATCAGTGGTTATGCCATTCGTATTGTCTGATGACAAATCATTACCATTTACTCATTGAAACTCCGCTCGGTAATCTTTCAAAAGGAATGCGCTATCTGAATGGGGTATACACTCAGAAATTTAATAAATCACACAAGCGAATTGGGCACGTCCTGCAAGGTCGCTATAAATCTATACTGGTTGAGAAAGACAGCTATTTATTGGAGTTGTCGCGTTACATAG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [80.0-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //