Array 1 3179275-3177804 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP049056.1 Pikeienuella piscinae strain RR4-56 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ==================================== ================== 3179274 31 100.0 34 ............................... CTGATCTCGCGCAGCGTCCCGCCGGGCGCCGCGG 3179209 31 100.0 35 ............................... AATTTGCCGTAGGCGTGATCTGAGAAGCAGTAGAT 3179143 31 100.0 34 ............................... CAGTGACCCCGAACATCGCGGCGGGCATTCGCGA 3179078 31 100.0 36 ............................... ACCGCCGTCATTCAGGACGCAGCGAACGGCGTTGTC 3179011 31 100.0 34 ............................... GGCTGCGATGGCGTCAACAGCCCGCCAATGGGCG 3178946 31 100.0 34 ............................... GACTTGCCCGAGCCGCGCCCGCCCCACGCGCCGC 3178881 31 100.0 35 ............................... ATCCAGATCGCGGGAGCGGAGATAGGCGTCGACCA 3178815 31 100.0 35 ............................... CTATTTTGTCCATCACCTTCGCCAGCGGCTCGGAG 3178749 31 100.0 35 ............................... CTCCGCAAGAGGCGCGAAGTCTGGCGCGTCGTCGC 3178683 31 100.0 35 ............................... GACATGGTGGAGGCGACTTTCCGTGATCGCTTCAA 3178617 31 100.0 35 ............................... CCCCGAGCGGGAGGATGCCGCCTTATGACGCTCAC 3178551 31 100.0 34 ............................... GCCGCGCCCGCCGAACTGAAAACGTCGATGTGAA 3178486 31 100.0 35 ............................... GGTCGGGTCGGCTCGGTCCTGCGCCGGGAAAGCAC 3178420 31 100.0 35 ............................... GATTCCGAGGGCGTCGCGCTGGTCAACACGCTCGG 3178354 31 100.0 33 ............................... ATCCAGACGCTGAGGTGACCTGATGCGGACCTT 3178290 31 100.0 34 ............................... GGCGCGTTCGACACCAAGACCGGGGCGGAGGAAG 3178225 31 100.0 35 ............................... GTCAGGCGCACGGCGGAGGCGCGGAACGGCACGGG 3178159 31 100.0 34 ............................... TGCACATGTGCGGTCCTGATATCCCTGATCCGCC 3178094 31 100.0 34 ............................... CCGACCTACCGCTCGGTGCAGTCCCGGGTCAACG 3178029 31 100.0 33 ............................... ATCACCGCCACCAACACCGGGCTGTTCGGTCTC 3177965 31 100.0 36 ............................... TCCCCCGGCTGCGCAGCAATTATTCCAACGGCGCGA 3177898 31 100.0 33 ............................... TGGTTCCGCCGGGCGGGGCATACAGCGTTTACC 3177834 31 87.1 0 .................CA..........GA | ========== ====== ====== ====== =============================== ==================================== ================== 23 31 99.4 34 GTCGCCCCCTCACGGGGGCGCGGATTGAAAC # Left flank : CGATGGCTATCCCGCCTATGTGTGGAGGTGAAATGCTTGTTCTTGTGACCTATGATGTAAAGACTGACACTCCGGGCGGCGCCCGCCGCCTCCGACGGGTCGCTCGCGCCTGTGTCGACTATGGTCAGCGCGTGCAGTACTCGGTCTTCGAATGTGATCTGAACCCGGCGCAGTGGGCGCTTCTGAAGCATCGATTGATGACGGAAATAGACCCGAAAGTGGACTCCCTTCGTTTCTACATGCTTGGAACGAACTGGAAGCGGCGTGTGGAGCATCTCGGCGCAAAACCCGCGATTGACTATGACGGTCCATTGATCTTCTGATGCGAACCGGAAGCGGTTGACGTTTCCTTGGCGGGTTCGCAGAATCGTTAGCTCTTTGACATCGTTGGTAGAAATCTCTGCCTGAACGCCATCGCTTATGGCTCTGCGCCGCCATTCTTGCAGTTTCGCAGTCGATCATGACTTTCGCCAGCGTTCTCAAGGGCCTATTTCGATACA # Right flank : GTCGCCTCCAACTTAGGCTGATTCGATATCATGGAGGCGCGTCAAGCAGGCTGCACAGTTGCGCGCTTTCGCCTGCAGTCCGAACGCAAAGACCGGCGACGCCGGCGCGAATCCGATCCCGCCAGTCCCATTGGCGTACAATTGATCATTCCGACGACGGCGTCGCTTTCGCCGAAGCGTCTCCTTCCGGCGACGCCGCCGGCCACGCAGGGAACGCGACGTCCGAGAGCTTCGGCCGATTCTCGAGATGTCGTTCGATGGATTTGCGAGCCCGCAGTGCCTCTGCGTCTCCGGGCGCGAGCCGCGCGGCTTCGACGACCAGTTCCAGCGCCAGCGCCTCCGTCCTTGGCGGTTCAGTGGTTTCGGCGCGCGCTTCGATCGCGGCGATCAGATCGTCGTCGGCGCGGTCGCGCATCCAGTCGAGCAATTTCGCATTCTGCCCCTTCGCCAACTTATTCAGTTCCTTGCAACGCCGCCCGAGGCCTTCGATCCGGCGTTCG # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCCCCTCACGGGGGCGCGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCGCCCTCACGGGCGCGTGGATTGAAAC with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-7.30,-7.10] Score: 0/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [45.0-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //