Array 1 2850663-2848913 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACOPE010000001.1 Ruminococcus sp. NSJ-13 1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 2850662 32 100.0 34 ................................ ATTCCAGACAGGATATTGAGGAGTTGTCGAACCT 2850596 32 100.0 33 ................................ CACTATATCCTGCCCTCTTTGCTGCTTCGGTTG C [2850594] 2850530 32 100.0 33 ................................ ACTATATTTCCCTGACACTCCTCCGGAATCATT 2850465 32 100.0 34 ................................ AGCAGATCTTCTCTACAATCTCTTGTCTCTCCCA 2850399 32 100.0 33 ................................ GCCATAATTAATCACCTCCTAAATCAATATGTC 2850334 32 100.0 35 ................................ ACACAATTCTTTATGCCGAAAAACCGAATGGAGAA 2850267 32 100.0 33 ................................ AGCTCTTGTTTCGTATATCTGCTTTTTCCGCCA 2850202 32 100.0 36 ................................ TTGCACGTTATCAACAGAGGATGATACGTCTGTATC 2850134 32 100.0 35 ................................ ATGAAGCAGACAGGCGGAGACATTGGCCTGTCACT 2850067 32 100.0 33 ................................ ACTCCTAACCAGAATCGGTCGACGCTGCTTTCC 2850002 32 100.0 35 ................................ GTGTCGAATACCCCGAAACCCTTCTGCCCGTCCTC 2849935 32 100.0 35 ................................ ATATACCGTGATTAAAGATGCAACGAAACGGGCGT 2849868 32 100.0 32 ................................ TCCACTCCGTGAGTAGAATCGTCCTTGCCACC 2849804 32 100.0 35 ................................ ATTAAAGCAACTGTTGCTTTCATTGAATGTGAACT 2849737 32 100.0 33 ................................ ATTCCGTGCGTTGCCTTCGGGAAGAAGGCGGAG 2849672 32 100.0 34 ................................ ACATGGTGTTCCGTCCCGCTTCGACTCTACCGTG 2849606 32 100.0 34 ................................ GGAAAAGAGTGTTCAGAAAGCTAAGAAACAGGCT 2849540 32 100.0 35 ................................ AAAAAGCAACATAACAAGATTGCCGGTATTAGCCG G [2849538] 2849472 32 100.0 35 ................................ ATAACAGGAGGAAAAGACAATGAAAAACATTAACT 2849405 32 100.0 33 ................................ ATGCGAGGAACACAAATGTTTCACACTCTTTCC 2849339 32 100.0 33 ................................ GTGTATGCGGCTTTCATGCTATCCAGTCCGCCG 2849274 32 93.8 36 ...........T.......G............ TCTGGAACAGCTGAATCATATATCCGCAGCTGCACT 2849206 32 96.9 33 ...........T.................... ATCTCAGCAAGGTTTGATACTGTCTCACACACT 2849141 32 96.9 34 ...........T.................... ATTTCCCTCCTTCTTCTTGCCATGACCATATGCT 2849075 32 96.9 34 ...........T.................... ATTCCGTGTGTGGTATTTGGCAAGTCAGCAGAGT 2849009 32 96.9 33 ...............G................ AACTGGCACGGCAACAATTTCATTCAAACCTAT 2848944 32 87.5 0 ...........T.............GG.C... | ========== ====== ====== ====== ================================ ==================================== ================== 27 32 98.8 34 GTCATCCTCCTCGTGAGGATGTGAGTTGAAAT # Left flank : AGATGAGTACCCACCATTTTTCTGGAAGTAGGTGAGCAGATGTTAGTTTTGATTACATATGATGTAAATACTCAAACTGCAGCAGGAAGGAAACGGTTGAGAAAGGTTGCAAAAGAATGCACTAATTACGGACAGAGAGTACAGAATTCTGTATTTGAATGTCAAATGGACGCAACCAAATGCAGACAAGTAAAAAATATATTGGAGAACATTATAGACAAAGAGGTAGATAGTCTGAGATTTTATTATCTGGGTGAAAAATATAAAAATAAAGTAGAACATATTGGTGCTAAGCCTGGTTTTGATGTTAAGGATACGTTGATATTCTAGTGCGAATGATAAGTGCACATAAATTTCCTGGGACATTCGCACCAGAAAAAGGGGAAAATTAGGCTTGGAAATATATATGAAAATGAAAAAAGATGTCAACAATAGATATAAAATGTTTATTGTTGATATAATATGTGATTTTAAATGGATTATTTTTGTTTAAAATTGCT # Right flank : AACAATAAGTCATAGTGATTCAATGTCAGGAGAAATTCTGGCATCTTTTTTATCTGAGTCGAGAAGGCTCCAACTTCTATAAGTGGTGAGTGATAAGAAATATATCTCAAGGATGTGCAACGCTTCTAAGGGGAATATGTCAGCTTAAGCCGACCAGAATCATCCACCAAGTCTCACGTGCGTTCGATTTAAATCAAAGCGAAGCTTTGAAAAAAGAATATATAAAATTTTTACATATCCATTGACATGCAAAACCTTTTGAGCTATATTATATATAAAATTTATATATATAAATATTTTACATATAAGTAGGAGGTGATTCGATGTATTTTCCAGTATCAGCATTACTGATTGAATACATAATCCTGACAGTGGTAGAAAGCAAGGATTCTTATGGATATGAGATTAGTCAGACAGTAAAGAAAGCAGCTGACATTAAAGAATCCACACTGTATCCAATATTGAAGAAACTTCAGAAAGCAGGATATCTGACAACTTAT # Questionable array : NO Score: 3.20 # Score Detail : 1:0, 2:0, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCATCCTCCTCGTGAGGATGTGAGTTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-4.00,-4.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [7-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [66.7-83.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.68 Confidence: HIGH] # Array family : NA // Array 2 2863349-2861865 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACOPE010000001.1 Ruminococcus sp. NSJ-13 1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 2863348 32 100.0 33 ................................ AATGGGCAGGCACCAGTGGAAATGTTTCCAACA 2863283 32 100.0 35 ................................ TTCATCTCCATAAAATCTGATAACTGCATCTGTCC 2863216 32 100.0 33 ................................ GGAATGAAAGATGAGATCAAAAAGGCATTAACT 2863151 32 100.0 32 ................................ CACCAGCAAGCATGAAGGTAGCAAAAGCCAAT 2863087 32 100.0 33 ................................ ATTGAACCTGCTTTTATATTTCTTGCCTTTACT 2863022 32 100.0 36 ................................ TCCTTCTTTCATAGCATCCAGATCATGCTGCAGATA 2862954 32 100.0 33 ................................ GTGTTCGTTGCCTTTCCTCTCACAACGATCTTG 2862889 32 96.9 34 ...G............................ GTTGTAGCCTGTACCCTGCTGCACTTCCGCTTCC 2862823 32 100.0 33 ................................ GCGATCATGGAAAAGCGAAGATCAGTGCATGCG 2862758 32 100.0 33 ................................ GGAATTAGCGTTCCCGTCTGCGGCGGATCTTCT 2862693 32 100.0 35 ................................ AAGAAATTATCAATCTGCTATTGCTCCCGATCCTC 2862626 32 100.0 35 ................................ GCTCATTCGTCAAATCACTTTCATATAGTCGTTGT 2862559 32 100.0 34 ................................ AATATTTCCCTCAGAAAAAGTCAGCATGGAATCT 2862493 32 100.0 35 ................................ GGAGAACTGTTCACAAGGTACGATTGACCGATATG 2862426 32 100.0 33 ................................ ACTAACTACGAACAAGACGTAGAAATACGATTC 2862361 32 100.0 33 ................................ ACTAGACAAAAGCATAAAGAGATTGATAACTGC 2862296 32 100.0 36 ................................ ATGAATGCCGCGCGGTTCATGGCGGCAGAAGAAGCA 2862228 32 100.0 36 ................................ TCGAATATTCTCATCAATGTCTTTCCACCTGTTGCA 2862160 32 100.0 34 ................................ GAACAGCAAATGTCAAAAGTGCAGGCAATCAGCG 2862094 32 96.9 33 ...............................T ATCGACCTGATGCCCGGTAGACACACGAACATA 2862029 32 87.5 35 .........T..AC.................T AATGACAAAAAGCAGCGTGTCGGAATCCTGAAGGG 2861962 32 87.5 34 .........T...C...A.............T GTCATAGCCTCAACGATATTGTTTACGATCAAGC 2861896 32 93.8 0 .........T.....................T | ========== ====== ====== ====== ================================ ==================================== ================== 23 32 98.4 34 GTCATCCTCCTCGTGAGGATGTGAGTTGAAAA # Left flank : GAAATGTGCTTTATTATATCTTAGGTATCGGACTGGCATTTGTACTCAAGGATAATCGTGCATTTTGCAAATATCTGTGCCCTGTTACGGTATTCCTCAAGCCGATGAGTTATTTTTCGTTTTTACGTGTCCATTGTGACGAGAGTAAATGTATTCATTGTGACAAATGCTTGCGCGTCTGTCCGATGAACGTGGAAGTTAATAAGGAATCCCGAAAGCGAAAAAATGGAACTGAATGCATTCTTTGCTATGAATGCACAAAAGATTGCCCAACAAAGGCATTGCACTAGGGAAAATGGATTTGTAGTGATGGAACAGGGAAACGTGGAGTGCGAAAGGCAAGTGAACAGGAATTTGCTGAATCATTCGCACCAGAATATGAATATTTTTGGGAAGAAAAAGGATATAATATAGAGTTATAGATATAAAAAATAGCGAATAATATGTTATAGTGTATATAAAGTTTGATTTTAAATGAAAAGATTTTGTTTAAAATTGCT # Right flank : TACTGATGCTTGGGAACAGCGTAAGTTGGGAGAACTTGGTTCATTGAAGAATGGAATGAACTTTTCCAAAGAAGCCATGGGAATAGGATTTCCATTTGTAAATCTTCAAAATATATTCGGAAATAATGTGATTGATGGTACAAATTTAGGGAAGGCAATGGCATCTGATTCACAGCTGAAAGATTATAATTTGCAGAAGGGAGATGTATTGTTTGTACGCTCTTCGGTAAAATTGGAAGGTGTAGGAGAAGCTGCCTTAGTACTACAAAATCTTGAAAATACAACATATTCTGGATTTATTATAAGATTTCGAGATGAATATGGATTGGATAATAATTTTAAAAGGTTTTTATTTGGAATAGAATCCGTACGAAATCAAATTATGGCACAAGCTACTAATAGTGCAAATAAAAATATCAGTCAAACAGTGTTGGAAAATCTTTGCTTGAAGATTCCGAATAAATCAGAGCAAGAAAAAATTGGTTTATATTTTTCTAACC # Questionable array : NO Score: 3.18 # Score Detail : 1:0, 2:0, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCATCCTCCTCGTGAGGATGTGAGTTGAAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-4.00,-4.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [11-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [58.3-83.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.68 Confidence: HIGH] # Array family : NA //