Array 1 3574048-3578004 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABTEA010000001.1 Clostridium saccharoperbutylacetonicum strain DJ098 Ga0423221_01, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================================================================================== ================== 3574048 29 100.0 37 ............................. AATGAATGGAGACAAGTTCTTAATTTACCGCCTAAAG 3574114 29 100.0 37 ............................. TTTACCTAATGCCATTGCAATCAACCTCACTTTCTTC 3574180 29 100.0 36 ............................. TTGGTATTTTCATGTAAAACTTTCCTGCATCACTTG 3574245 29 100.0 36 ............................. CATGGATATTATTCATATCAATTTTATGTTCATCAA 3574310 29 100.0 37 ............................. TTTTTCTTCATGTTTTTAAACCAGTTAACTATTTCAG 3574376 29 100.0 36 ............................. ATAGGCTACTCTCTGATTGTTCTTTTTTGGCGTTAC 3574441 29 100.0 36 ............................. TATTAAAAATAAATAATGTATCTGTTGTATTTTTAA 3574506 29 100.0 36 ............................. CTGCTTTATATGGAACTTATTACAATGCTTATAGAG 3574571 29 100.0 36 ............................. TTTAATTATTTTAATCTTCCATTTGAATCTATTAAA 3574636 29 100.0 37 ............................. AAATAAGATTTCATAAGAGTTAACTTATTACCTCTAA 3574702 29 100.0 36 ............................. ACAACTAAGATACCATCCCCATCAATTATATATTCA 3574767 29 100.0 36 ............................. CCAAATTTCACGTTCCAGCCTCTTTTTTTCTTTAAA 3574832 29 100.0 36 ............................. CTTGCTGCTTTTCTTCTTTTCTTCAATTTCATAAAG 3574897 29 100.0 37 ............................. TTTGAATTTGTTTTTGTTCATCAAGTTTCTTGTCTTC 3574963 29 100.0 36 ............................. TTTTCAAATGCCATAGACATTAATTGTTTTGTTAAG 3575028 29 100.0 37 ............................. TCAAATTAATTGTTTCATTAACATGGTCACTAATCAA 3575094 29 100.0 37 ............................. CTAATCATAATTTCTGAATTTTGAAGCTTTCCACATT 3575160 29 100.0 36 ............................. TATTTTTATTGCTTTTTTCTTGCAATAAATGTATAA 3575225 29 100.0 37 ............................. TGGTTTACATTTGTTATTGTAGATATTAACACATCAT 3575291 29 100.0 37 ............................. AAAGAAATAATGATAGAGTACATTAAGGATAATGTTA 3575357 29 100.0 37 ............................. TCGTTTTTTACATAGTTGTATGTTCTTTGAATTCCAT 3575423 29 100.0 38 ............................. AAAGATTGGAGTGTGCCAGTTCCAATAACTTTTAGAAC 3575490 29 100.0 36 ............................. ATTGAAGAAATTAAAGAATTGAAAGAATTATAATCA 3575555 29 100.0 36 ............................. AAAGGAGATATACACATGAATAAAAGAGAAAGAATA 3575620 29 100.0 36 ............................. CTGGACCATATGTTTAATAATGAATCAGTTCAGTTT 3575685 29 100.0 37 ............................. AAATTTTTATATTTCATAATGAAGTCAATCGCATCAC 3575751 29 100.0 38 ............................. GATAGAATGGCTAATATTATAAAAAAATTTCTTAATGC 3575818 29 100.0 36 ............................. TGGAGTAATATTCCCTTTATGTTCTATATAAATTTT 3575883 29 100.0 36 ............................. CATATATAATTTAACAGATTTATAAATTTTGTCAAT 3575948 29 100.0 36 ............................. CCTTTTAATATTGTCTAAAACTATCAGATTTCCAAA 3576013 29 100.0 37 ............................. TCAATATATTCCATGTTATAAACGTCATAATGTTCTA 3576079 29 100.0 36 ............................. ATAGGATAAAAGTTAGAGTAGATTTACTAGTAAAGG 3576144 29 100.0 36 ............................. TAGCTCCACCGCTTGTAGCTACAACACCAACCATAG 3576209 29 100.0 102 ............................. TATTATTATCGTATTTATCAGCTTTCAATAAGATAAATGCAACTACATTTAAACAGAATGTAAATTATTATTATCGTATTTATCCCAAAGCCAATAGTCTAA 3576340 29 100.0 36 ............................. TAAGATGGTTGATAAGACTATACGTGAATATTATGA 3576405 29 100.0 37 ............................. AATGCTTCTAAATCACTTATGACGCGTTGTTGCATAG 3576471 29 100.0 36 ............................. CAATGAGTTTAGATGATGAAAGTTTAACATTAATTG 3576536 29 100.0 36 ............................. TTAGATCATCTATTCAATAATGAATCAGTTCAATTT 3576601 29 100.0 36 ............................. ATTAAATGGTTGCTTAAGAATAATAAAAGATATCAC 3576666 29 100.0 36 ............................. CATTCTCCTATCTCAATAAATGAATTATTATTTTAA 3576731 29 100.0 36 ............................. ACGCAATCACCATTTAATATTAAAATTCTGAAATCT 3576796 29 100.0 37 ............................. GTGGAATGTTGCCATCCACGTTACAATCTTGTGTTTT 3576862 29 100.0 37 ............................. CTTTATGAATTTAAAAATACTGATATATCAAAAGTAA 3576928 29 100.0 37 ............................. ACCATATTAGCCATTTTAGCTTCAAATGATAAATTTG 3576994 29 100.0 37 ............................. TTTTCCTCAAAAGAAAGCTTATCCTTATCGATTGAAG 3577060 29 100.0 35 ............................. GCTTACGTGGCAACATACAAAAAGTTTCTTTATAC 3577124 29 100.0 37 ............................. AACTTTGTTATAGCTTCTAAAGAAAATATTATTACTA 3577190 29 100.0 37 ............................. TGATTATAACATTATCATTGATGATATTTTTGTACAA 3577256 29 100.0 37 ............................. GGCATATATTTTGTTGTTGTATACTCAAAAATGTGAA 3577322 29 100.0 36 ............................. TGCATTAATACCATCATGCCCGACATTGCTTCTTGC 3577387 29 100.0 36 ............................. AAAGGTACAATAGATAGATTTACAAGTGATATTTAT 3577452 29 100.0 37 ............................. TTGGTATCAAGACTAGTTTCAATAATTATTTTTCCAT 3577518 29 100.0 36 ............................. ATTACTAGAATGGGAGGAAAAAGCAAATTAAGAAAC 3577583 29 100.0 37 ............................. TTTACTGGCTCCTTTGTAGCCCCTTCTAGTGTAAATT 3577649 29 100.0 37 ............................. CTGTTCTGCCTTCTTTTTGTGCTTTGGATATTTCGGA 3577715 29 100.0 36 ............................. TATATTTATTACATCAGTTAAATTTATTTCTCCTTT 3577780 29 100.0 36 ............................. AAATTATTATATGTTTAGAGAAATTGGGTGGGCTAA 3577845 29 100.0 37 ............................. GAATGATGTGAACCACCACTACTTCCACCAGTTGTTG 3577911 29 100.0 36 ............................. ATTTTAATCTTTGACCATACTACTATTTCTCTTTTA 3577976 29 96.6 0 ..........G.................. | ========== ====== ====== ====== ============================= ====================================================================================================== ================== 60 29 99.9 38 GTTTTATATTAACTATGAGGAATGTAAAT # Left flank : ATAAAAATGGCAATTGAAAATGAAGAATATAAGCCATTAAAGGCGTGGTGGTAAGATGTTTATAATATTAACATATGATGTTGGAGAAAAGCGGGTAAATAGAGTGCGGAAATGTTTAAAAAAATACTTAACTTGGACTCAAAACTCAGTATTTGAAGGAGAAATAACAGAAGGAAAATTACATAAATGTCTAGCTGATGTTAATAAATTTATAGAAAGAGATGAAGATTCACTCTATATTTATATGGTTAAAAATATTCACAATATAAAGAAAGAAGTAATAGGACAGCAAAAGAATTATGATGAGCTATTTTTGTAGTTGCAGTAAATCAATTTTGGGTAAAAGATGTTTTAAATCAGCATAAATTCTAGCTTTAGAGTAATAATATCTATAAACACTATTTCCATACTAAAGGTTTACCGCAAGAATATAAAAATTAAATCAAATTTATCAGCGATAAATGGCTAATTTACTAGAGTTATGGTATACTTTTTTTAGG # Right flank : TTATGATGAAAAATGAACAATAAAAGATTCAGCTATTGTTTTATATATTGTAATTCAATAAAATTATAATAAGTATGTTATAGAAAAAAATATATGACATAGTGATGCAGCACATCAAAAATTATTTAAATATATATAGAATGACTAGCAATGGATATCTCTTATTATTTAATTTTAATAAAAATAAATAATAAGAGTGAAAAATATTTTATATAATAAACAAAATATTTGAAGATAGAGTATAGTTGATACGTTGACAAGGAGATAAGGAATAATGACTTTACAACAATTAAAATATGTAGTAACCGTTGCAGACAAAGGAACAATTAGTGATGCAGCTAAGGAATTATTCATTTCTCAGCCTACAATTACTAATGCTATTAAAGATTTAGAAAAGGAAATGCATATTACTATATTTAATAGAACTAACAAGGGAATTGTAGTTTCAAATATAGGAAATGAATTTCTTGCATATGCAAGGCAAGTACTTGAACAAGCTA # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:-0.08, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATATTAACTATGAGGAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:79.31%AT] # Reference repeat match prediction: F [matched GTTTTATATTAACTAAGTGGTATGTAAAG with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-81.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], //