Array 1 125788-125579 **** Predicted by CRISPRDetect 2.4 *** >NZ_QTXH01000002.1 Coprococcus sp. AF16-22 AF16-22.Scaf2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =========================== ================================== ================== 125787 27 100.0 33 ........................... AATGCCGCAGGGCACACCAGCCGAACAGGCTCG 125727 27 100.0 34 ........................... AATGCCGCAGGGCACACCAGCCGAACAGGCTCGT 125666 27 100.0 34 ........................... AACACGGCAGAGTCGTACACTTTGAACAGGCTCG 125605 27 100.0 0 ........................... | ========== ====== ====== ====== =========================== ================================== ================== 4 27 100.0 34 AAGAGACTGTGAGGTGGCATGGCTCTG # Left flank : ATACTCAAGCTCCTCCTCTGTAAATCTCAGATCACAGTAGAGCTGTATCTGTCTCTTGATTTCATCAACCATCTCCTTTGTGAAGAACACGTCAGTATTCCTGCACTTGAATGACCATGTTGTCTTATAGTCACTGAACTGATGGTAAATCGCCTGTCCCATACTAAACTTGTACATATCCGTTTCAAGCAGGCTTGTGATTATTCTTTCCATTTTTATACTCTTCTTTCTCTTTTTATCCACTCCACACATACGACTTAACCGCCATATATCACGGAAATACGGAAGTATACGCAAGTTCAAATACTTCCACTTATAATAAGTTAGCACACAGCCCGCTGTCAAGCACTATTACCTTGCAACTATCACACATAGTATTGTATAATGTTACCGTTCAGAGCCATGCAGCACAATATAAGAAGTGGCTTGTCATGCTTGCATGAACAAGGCATTTCTTATATTGTGCTATACGGCGGATACGCCGCACCGAACAGGCTCGT # Right flank : TGTATACATTATGAAAAGAGGATAGATTATGTTAGAGCAGAACAACGAAAAAAAGCCTAAGAAGTACGCCGGCATTCTGGCTCACCCGACATCATTCCCAAGTCCTTATGGAATCGGAGATCTGGGTCCGGGCGCCTATCAGTTTATCGACTTTCTTGCAGCTTCAGGATTAAATCTGTGGCAGGTGCTTCCACTCGGTCACACAGGCTTTGGTGATTCACCTTATCAACCATTTTCAGCATTTGCAGGACAACCACTTATCATCGATATCGACTACCTCAGAAAAAAGAAGTTACTTCTGGACGAGGACTTCTCAGCTATGCCTGACTGGGATCCTGAGAAGATCGACTATGGAACACTTATAGAATTCAAGACTGGCCTTCTGAAGAAAGCGTACGAGAGATTTATCGACGCTGACTATGCAGATGATTTGTCAGGAGACGAGGATCTCATGGCAAAGTTCGATGCATTTGTCAAGAATACATCATGGCTTGCTGACT # Questionable array : NO Score: 2.66 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AAGAGACTGTGAGGTGGCATGGCTCTG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [6,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-2.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [70.0-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.37 Confidence: LOW] # Array family : NA // Array 1 563000-561957 **** Predicted by CRISPRDetect 2.4 *** >NZ_QTXH01000001.1 Coprococcus sp. AF16-22 AF16-22.Scaf1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================= ================== 562999 36 97.2 27 ...................................C TTTATTAAAATCAGTCATGTCAGGAGG 562936 36 100.0 27 .................................... TAATCGTTGCATGGTGTACTCCAAGGG 562873 36 100.0 27 .................................... GATGGCAGTATAGGGTCGATAACGGGG 562810 36 100.0 27 .................................... GCACACATTTAGAGCATATTTACTACG 562747 36 100.0 29 .................................... GGTATCCTATCTAAGTCTACCCAATACAG 562682 36 100.0 28 .................................... ATGTGTCACTGGTGACCCTATGCCTACA 562618 36 100.0 26 .................................... GAAAGCCTGATTCGCCCTCACTATTG 562556 36 97.2 27 ....G............................... TGATCTGCCTACAGGCGAGGGCGTAAA 562493 36 100.0 26 .................................... GAAAGCCTGATTCGCCCTCACTATTG 562431 36 100.0 27 .................................... TGATCTGCCTACAGGCGAGGGCGTAAA 562368 36 100.0 26 .................................... AGAATCCAATCTTATACTCTGGTGTG 562306 36 100.0 27 .................................... GCAAGAATGATCTTGAGTGGTGTCTGA 562243 36 100.0 26 .................................... CCTATTCAACCAGCCAAAAAGAGGCC 562181 36 100.0 27 .................................... TGAAGATAATAACAGGAAAAACAGGGA 562118 36 100.0 27 .................................... TTTAGAAAGTCCCTCTCTAGCTCTGAT 562055 36 100.0 26 .................................... TTGATCCAAAGAAGGGTGAAACAGCC 561993 36 97.2 0 ...........................A........ | A [561963] ========== ====== ====== ====== ==================================== ============================= ================== 17 36 99.5 27 GTTAAGTAACCTATAGTAATTTCTACTGTTGTAGAT # Left flank : ATATATTCTTATACATACAAAAATATTATAGATTTTTTATGAAAATGAAAAGTGTAGAACAGTTTCCTAGTTTCGAGTTACATTAGATGGGAGCGAATATGGTTATAGTTAGTTATGATATATCAGATGATAAACTTAGGACAAAGTTTTCAAAGTATTTATCACGATTTGGACATAGATTGCAGTATTCGGTATTTGAAATTGACAATAGTCAGAGAATAATAGAGAATATAGTTACAGATATAAGCAATAAGTTTGAAAAAAGTTTTACTCAGGAGGATAGTGTTATGATATTTAAAATGTCCTCAAATTGTGAGGTGTTAAGATTTGGGTATGCCAAAAATGACGAAAAGGATTTTATTGTTATTCAATAATGCAAACCTTGGTCTTTATAATCAATAATAAATAGGTTACTTAATATATATGGGTAAAATAAATAAAAAAATAATCAAATATGATGGTTACAAGACAGAAAATTGTGTAAAAACACAAAAATGGGG # Right flank : ATGGATATATAGTGGAATCGTTGGGGAATAAAACAATAGATTTCACAAGTTATAATAAAGCGTTAATGAATAATATTGCTGCATAACAAGGAGAAGTAATTGATCTTAAATGTAAATAAATTTATATAGGGGAAGCGATGGGCAAAAGAAAAAATAGAAAGTATGGCAACAAGCAAAGTGATGTCAAGAAGGATAGGGAAAAAGACATTGAACTTTACGCTGAAGCACTATATTTGGCTTTGAAAAAATATGATGAAGAAAGTAAAGCAAATTCATATAATATCATTAAAGATATAGACGAAAAAGAAAAGTCTAGACAAGTAAGAACCGCGTTAAGAATAGTTTTTCTGCCATTCTTGAGTAATAAAAAAATAATAACACAGGGGAAAATATATATAGATTTACTTGGTTGTATTGTCTCTATTGTAATTAGCTTACTTGGATGGATAATTTGGCTTGCAGGTATACTGGTGATTATAGCCAGTTCTGTAAATATAAAT # Questionable array : NO Score: 3.09 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:-0.13, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAAGTAACCTATAGTAATTTCTACTGTTGTAGAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.00,-2.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA //