Array 1 41965-43281 **** Predicted by CRISPRDetect 2.4 *** >NZ_PQMM01000012.1 Corynebacterium sp. 49B NODE_12, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================= ================== 41965 36 100.0 28 .................................... ATAGCGCTTGTACGGCCTCAGACGTAGT 42029 36 100.0 28 .................................... CGCCTCCGACGGTGGCGTGATGTTCAGC 42093 36 100.0 28 .................................... CTATGGGGTGTGACCGTGAAGGAGTTAC 42157 36 100.0 28 .................................... GGCTAGTCTCACTGTCTCTGCTTGTTCT 42221 36 100.0 28 .................................... ATTGGGCTTTGTTGCCTCCCGCACCCGG 42285 36 100.0 28 .................................... CGCCAACATCCAACCCCTGCAAGCCCGC 42349 36 100.0 28 .................................... GGGATCGACATAGGGCCGCGATGGACCG 42413 36 100.0 28 .................................... ACCAGACACCACTCGAGCAGCACCTCCG 42477 36 100.0 29 .................................... TACTACTTCCGAGGCCGTACAAGCGCTCA 42542 36 100.0 28 .................................... TCGCGGCGGTGCACAGCCCAGCGCACCC 42606 36 100.0 28 .................................... ATAGCCAACGTCTCACGTGGCGAGACAA 42670 36 100.0 28 .................................... CTACATCTAGTAGGGCGTCGAGCGTGGG 42734 36 100.0 28 .................................... ACTGTAGCGGGGCTCACGCACCAAGCAC 42798 36 100.0 28 .................................... GTCATCGGGCTGGGCGAATGCCGATCCA 42862 36 100.0 28 .................................... ATCCCAGCCGTAGAACTTCCACTCATGG 42926 36 100.0 28 .................................... TTAGACGGGATACGGTGCTTCGCGCGGG 42990 36 100.0 28 .................................... GGTCGAGGACGTGCACGCTGGGGCGGCG 43054 36 100.0 28 .................................... TGGGTGTGGGAGTGTCCACCGGCGCCGC 43118 36 100.0 28 .................................... AGCGGCGTCAGAGGTGTATTCCGGAGAG 43182 36 100.0 28 .................................... CACTGCAGCGTGGGATACGGCCGAGGGG 43246 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================= ================== 21 36 100.0 28 GAAGTCTATCAGGGGTATATCGAACTGAACCCCAGC # Left flank : CATTCAACAGCAATGGCCAGAGTGTATCGACGGTCTTTCAAGACTTTGCACAGCATTTTGGTTTGTACGTCGAAGGAACAGTGGATCGGCTACAAGTCCCGCGTTGGGAAGGGCAGCTCAGTGCCAGCGAAGGACAGTGAACCGGTGTGGTGCGTCGTGATGTTTGACCTTCCGGTGAAGACCAAAAACCAGCGTAGAGAAGCTAATCGCTTCCGCAACCGGTTGTTCGACCTTGGGTTTTGCCGCGCCCAATTCAGCGTCTACGTTCAGTATTTCCCACTGGCGGCGCGTCTCAGCACGATAGTCAAACAGGTGAAAGGCGAACTTCCCGCAGGCGGAGAAGTGCGTATTTTGTCCGTGACGGACCAGCAGTGGGCAAAGGCGATCCGTTTTTCGAACCACAAGGAACAAGCGGTCGAAGAAATCCCCTCTCAACTAACAATTTTTTAAAAGCGCATGCCGAAAAAGACCCAGTTCAGGCCCTGTTTCTGGGCCTCACT # Right flank : CGAAAATGGGCATGGTGGCGGTCTCGGTTAAAGCCTATGGCGCTGCATCACGCTTAACGGCAGTACCGTTTTCCACGTCCTGTGCTGCGATGATCCTACAACCACAAGCCTGTGGCTTTCTGCAGGATCACCGCATCGCGACCTACCGCGTCGCCTCCTCCAACAGGTACAGCACGTGCTCATAGCTCCGCCCAGTGATTTGCTCCATGCCCAGCTCGCAGGTGCGGTTGGAGGACACATAGGCGTCCACGCGCCCATTGGCTTCGGCCTCGGCCAGCCCGGCGCGCTCGTCGCGGGTGGCGGCGTCGAGAAGCTCGGGGTGGAGCATGCCGCGGTCGCCGGCGGTGCCGCAGCAGCCGGCGCCGCGGGGCACGAAGGCCTCCTCGGCGGCGAAACTGGCGACGCGCACGAGGGTGTCGCTGAGTTCCATGTGGGCCAGCGAGCAGTTCGGGTGCACGGCCACCCGCCCAAGGCGGCGGGTGGGTTCAAGGTGCTCGATC # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAAGTCTATCAGGGGTATATCGAACTGAACCCCAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [11,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.70,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [53.3-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.01,0 Confidence: HIGH] # Array family : NA // Array 1 155506-153465 **** Predicted by CRISPRDetect 2.4 *** >NZ_PQMM01000001.1 Corynebacterium sp. 49B NODE_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 155505 28 100.0 33 ............................ CTGTCGATGAACTGGTGGATTACGTAGTTTCCA 155444 28 100.0 33 ............................ TTGTCCCGTTGTCTTGAAACGTCACGCCGCTGC 155383 28 100.0 33 ............................ TCCGGGCAATTTCGGATTCACCGTAGCCCCCGT 155322 28 100.0 33 ............................ TGCCTCATCGAGGTATACGGTATCGCCAGATAG 155261 28 100.0 33 ............................ CTCACGCTCTTCATCTTCAAGAGGGCGCTTCAT 155200 28 100.0 33 ............................ GATGCTGCCCCTCCCACACACACGCGGGAGGGA 155139 28 100.0 33 ............................ GGCTAGAGGGCGCGCCATCCGGCCCGTAGTGTG 155078 28 100.0 33 ............................ GCGATCGAGGCCGTGGGGACCGGCTCGTACTGG 155017 28 100.0 33 ............................ CATTCATGCGATAGGCGTAGAGGGCGATGCCTT 154956 28 100.0 33 ............................ GTGGGATAGAGGCGCGATCGGTCCGGACGATAT 154895 28 100.0 33 ............................ CCGTGAGCGGCTGGGCGTGAAGCCCGATGCGGA 154834 28 100.0 33 ............................ GCTTACGCTTGAGATAGATGGGCCTCCAAGGAA 154773 28 100.0 33 ............................ TAGCTAGATCGTCGATAGGAATACCTGCGGTGT 154712 28 100.0 33 ............................ GAGCAAGCCCAAGAGATTCAAGCGCGTGTTTTT 154651 28 100.0 33 ............................ CTGCCCGATAGCGACGGCCGTAGATCAGTGGGG 154590 28 100.0 33 ............................ TGTGGAGCACCGGCTAGGGGGCGGGGATGATGC 154529 28 100.0 33 ............................ TCCCGAGCCATCTTGAGGGTGCAAGATGGCCGG 154468 28 100.0 33 ............................ CTGGGCATGCAATGTGTGCTATTTTCCCAGCTA 154407 28 100.0 33 ............................ CTCGACTATGAGGAATACGAATACGGCTTCCTG 154346 28 100.0 33 ............................ TTTCGACATGGACGCGTTCCGCCGCCGTGTCGA 154285 28 100.0 34 ............................ ATGCGCCATAGACCGCGTCGGCGTTTTCCTCGAC 154223 28 100.0 33 ............................ GTCCCTGAGCTGCTCTTTTGTCCCCTTGAAGGC 154162 28 100.0 33 ............................ CAGCCTTAGCCATCTGCGCCGCACCATCCGCGC 154101 28 100.0 33 ............................ GCCCGGATTGCCGGGAATACCGGTCTCTTCGCC 154040 28 100.0 33 ............................ TCAGGTGTACGACCAGTTTTCCGGACAGCTCAG 153979 28 100.0 33 ............................ GGAAGTGGTGAACGATGGCGCAGGTATATCGCG 153918 28 100.0 32 ............................ CCATCGCCAGCATGAGCTACGAGTACGCGGTA 153858 28 92.9 33 CG.......................... CTACTCGCCACAAGCCTCGCCGAAAAAGGACAC 153797 28 100.0 33 ............................ TGTGGATACCCTCTGGGGCGCCGTCCACGTCGA 153736 28 100.0 33 ............................ GTCTGACCTGAACAAAGATGACTTTCAGAAGAA 153675 28 100.0 33 ............................ CGTTGCTCGCAGCGGATGCAAACCCTCTATTGG 153614 28 100.0 33 ............................ TTGTGCGGCGACGGCCTGCGATTCGACCGCATA 153553 28 100.0 33 ............................ GAACTATCGAAAAAGGTCCAGCAGGCCGAAGAT 153492 28 92.9 0 ..........................TG | ========== ====== ====== ====== ============================ ================================== ================== 34 28 99.6 33 GTTTTTCCCGCACGCGCGGGAGTGGACC # Left flank : TTTTAGATGGCGGTAAGACAGAGCTATCTGGAGGGTGGCTTGCCGCCAATGGCATCGTATTCAAACGTATCCAGGACGCCCCGCCTGTCAGCGTTGAGATGATGCTTCACGCTAGTAAAGGATGGCAGACCTCCCCAGAGCTTGGAGCATCTGACCATATTCTCGACCGGCTCTCGGATACAGCGCCCGACACGGTAAGAGTAGAAGAATACTTACCTATTGCCGTGGGCATAGCCGTGTCAGGGCGTCCCTTGGCCCAACACGGAGTGGCGCATCTCAAAGGCCGAAAGAGGTTTCTTCCGCGCCCGACATATCCAGTAAGTTTATGGACTCTAGAGGTTCTATCGAGGAGACACCGTGGTTCTGGTCTGTTGGCGGAGGAGGTGACGCGCGGGAAATTTAAGACTGTTGCTCCACCGATCGTAGTTTAGTTCGTTCAAGGCGAATAGAAGTTGAATCTATACGCCGTGTTTGCTCGCTAAACCTGCTGTTCGCAGAGT # Right flank : CAAGCTCCTGTGTTTACCTAGCAATCCAGTCGAGTTTGCCGAGGTCACCAAAAAATGTGACCCATTGTGGAGCGTGAGGGGCATCGCAGCGCTATGTGTCCATCTGTCACGATTGTGATCAGCTGTCACCTCGTTGAAAGCATGCATGAAGCATCGTTTCCTGAAGCGGTTGTGCCTTGGCAGCGGTGCTGATTTGTCCGCTGTAGCTTGTGCGCCTGTGACAGGAATCGGTTGCTGGGCACTGAAGACTCTTTCTTACTGTGGTCGGGATGCATATGGGCGCCATCAATTACCGACCTAGATCTGAATACCACTTATCTAGCGATGTCCCGATCCAGTTGAGTAGTTTTTCCAGAGCGTCTTAGGTGGAAACTTGACCGCTCCTGCGTTAACGAGTCCGTGGTCGTAGTGATACTTCGTTTGCGCTTCAGCCTTGAGTGCGGCGGGTGCCGTTTTCAGAAGTACTCGAATGGGCGGTAGAAGACATAGATGCGGCTCTA # Questionable array : NO Score: 3.24 # Score Detail : 1:0, 2:0, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTCCCGCACGCGCGGGAGTGGACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-10.90,-11.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [53.3-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.41 Confidence: LOW] # Array family : NA //