Array 1 227880-225725 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP021200.1 Taylorella equigenitalis strain 79-1587 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 227879 32 100.0 34 ................................ ATTATCTATCCACCTTAACTTCAACCATTTCGGT 227813 32 100.0 35 ................................ TATACATTTTGCGAGACTATTTTAATTGTTAACTC 227746 32 100.0 34 ................................ GCTTGAATAGATTCGGGCTGTCTGATTAATTCTC 227680 32 100.0 34 ................................ GATGAGCTCATCAATCGATTTCACGGTCATCTAT 227614 32 100.0 35 ................................ TGCAAGTAATTCACACGCCTTAACTTTTATGACAT 227547 32 100.0 34 ................................ CTGAGATTAAAAACTTGTTAGTTGAAAATAATAT 227481 32 100.0 35 ................................ GGCTAATGTCGCGGAAATGCTAGCACCTGCTTGAT 227414 32 100.0 34 ................................ GGAACGTTCGAAACTACAGCATCAAGGGAACCCT 227348 32 100.0 34 ................................ CTGAGATTAAAAACTTGTTAGTTGAAAATAATAT 227282 32 100.0 35 ................................ GGCTAATGTCGCGGAAATGCTAGCACCTGCTTGAT 227215 32 100.0 35 ................................ ACGTGACAATATGAGCACGGTTGCTGATTGGTTCG 227148 32 100.0 35 ................................ AACAGAGTCCATTAGAGGATTTGCAGATGAATCAA 227081 32 100.0 34 ................................ GACGAGAGTCTAACTAAGACACCAATCGCAAGGT 227015 32 100.0 34 ................................ CAAGATTCATTAACAGAGCTATTTCAGCTTACAA 226949 32 100.0 34 ................................ CCCGCTGGAAAACAGCTTATCAAGTATGGCTCGA 226883 32 100.0 34 ................................ ATGTCCAAGTAGACCTTAGTGCGACGGTCCATAA 226817 32 100.0 35 ................................ CGCAAATAATCGAATGGGTACACCGTAAAACTTGG 226750 32 100.0 35 ................................ TTAATTAAGTAAAAGGACAAAAAAAATGAATCAAG 226683 32 100.0 35 ................................ GAAGTTTCGACTGGATACGCTTGCAAATTAACAGA 226616 32 100.0 35 ................................ GAAGTTTCGACTGGATACGCTTGCAAATTAACAGA 226549 32 100.0 34 ................................ GAACGTCACCAACTTTACGATTGCTTAAAGGTCG 226483 32 100.0 35 ................................ CTATGGCAATTAATGCCACTTCATTTTTTATGCAA 226416 32 100.0 34 ................................ GATTGTGTAATCTCGTCCAACAATATACTTCATT 226350 32 100.0 34 ................................ TTTTCTCAATCATCGCTTGTGTAACCCCAAATTC 226284 32 100.0 34 ................................ GTAAAAAACATCGAATAGAAAAAGCACTAATTGG 226218 32 100.0 33 ................................ TCTGCCGAAACTATACGGTCACCACCGAACCAG 226153 32 100.0 34 ................................ TAACTGGAAGGACGGGTTGAATGGCACTTACTGA 226087 32 100.0 34 ................................ TTTTCTCAATCATCGCTTGTGTAACCCCAAATTC 226021 32 100.0 34 ................................ GTAAAAAACATCGAATAGAAAAAGCACTAATTGG 225955 32 100.0 33 ................................ TCTGCCGAAACTATACGGTCACCACCGAACCAG 225890 32 100.0 34 ................................ TAACTGGAAGGACGGGTTGAATGGCACTTACTGA 225824 32 100.0 36 ................................ TTCTAAACTACTTATTCGGAAGTAAACTTCAAAAGT 225756 32 87.5 0 ....T.....T...T..A.............. | ========== ====== ====== ====== ================================ ==================================== ================== 33 32 99.6 34 TCAGCCACGTACGCGTGGCTGTGTGTTTAAAC # Left flank : ACAAGAATATCCTCCCTTCTTAATGAGGTAAACATGTTAGTACTTATTACTTATGATGTAGATATGAAAGACAATTCAGGTGCTAAAAGAATGAGAAAAATTTCGAATGCCTGTCAAAACTTCGGACTTAGAGTTCAATACTCGGTGTTTGAATGTGATATAGACCCAGAAAAGTGGATAAAATTAAAGAGTACTTTGCTTGATTTATACGCCCCTGAAAAGGATAGTTTGAGATTTTACAATTTGGGAAGTAAATGGCGGGGAAAGGTTGAGCATCACGGTGCAAAACCTTCGATAGATATTTTCAAGGATCCTTTAATTCTTTAACGCTAACCACTAGTTGACATTAGACTAAGATAAGATTAGCGATACTTTTGTTCTTTAAAAATCAAATAGTTTTTGAACTTTTGCTAAAGTTCTAATTTGAATCCTTATCACTTTAATAGCTTAGCGATTATAAGCTTTAAGAATAAGTACTAAAGCCATTTATAATGATGGCT # Right flank : GACAGATTAAGAAATGAGTTATAGTTGAATCTATAACTGTCAAGTCTACTTGTTTTAAAAGCTTAACTAGTATCCCATGTATCCATTCTCACATTAAATGCAATATACTCAACTAGCTTTGTTTTTAAGTATATTTATCAATACTGTTACAACACTAACAGGCAAAAATTCAAAGTAGCTTCTAAATCCTAAATCGATTTTAAAATCGAATTTTGTTTTACATAGAAAATCCTTATTTTTAATCACTTTCTGGAAATAAAATTTCTTTATTATTTATAAGTATTTTTTTCTATCGATTACTAAATTGAAATTGGGATTAACCTTTTATTTACCTAGGCTCTGGGTAAGTATTAAAATTAACCTCTTGCTTGCAAAAAAGTAAGTGTGTTTAAACAATTTTTAATTGACTTTAATCTGAGTCGTGCAGCCTTAGGGCTGCACATCCATTTTTAGGAAATCATATAAATGTTTATAGCACATACTCGGACTCTAGACTCTGT # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TCAGCCACGTACGCGTGGCTGTGTGTTTAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GCAGCCACGTTCGCGTGGCTGTGAGTTGAAAC with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.90,-3.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //