Array 1 786640-786306 **** Predicted by CRISPRDetect 2.4 *** >NZ_GG698597.1 Selenomonas sputigena ATCC 35185 Scfld1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================== ================== 786639 37 100.0 36 ..................................... TGCTACGCCCTCATCGATGAGAATCTGAACTTCGTC 786566 37 100.0 37 ..................................... TCTACCTTCTCAACAGCAACCTCGTCAATGTTCTCAC 786492 37 100.0 40 ..................................... CCTTCGAAAATTTCGATAGAAACACCGCCCTCGTGTGGAA 786415 37 91.9 36 ...A...............T...........G..... TCCTCAGCCTGGTTGGCGTTGTTCCAGCGATCTGTT 786342 36 86.5 0 ........A-....T..............T......G | C [786309] ========== ====== ====== ====== ===================================== ======================================== ================== 5 37 95.7 38 GTCGCATGTGACCTCATACCGCTTGCGGTATTGAAAC # Left flank : TCGTCGGCCGCATCTGCATGGATCAGTGCATGATCGACGTCACCGACATCGAAAGAGTCGCCGAAGGCACGGAAGTCACGCTCTTCGGCTCGGCGACGCTGAGTGCCGACAATGTTGCCGCTTGGCTCGGCACAATCAACTACGAGATCCCATGTCTCATCGCATCGCGCGTGCGGCGCGTCTATATCTGAGCTTTCAGGACATATATTCAGCGGCGTCCCCTTTCGCTTGAAATGGGACGCCGTTTTTGTTTGACAAAAAGGAGAAACCATGCTACAGTATGAACTATAGGAAAACCTCTTGGAGGCGAAAAAACGGGGCAGGTTTTCCGATTTTCCTCGAATCGCCGCAAGCCTTGCTATATAAGACTTGGCGGGGTTATTACATACTCGCTGGGTATGTAATAACAGCCGAAAAAGTGCGATCACATGTTCGGCTTCGAGGAGGTTTTCCAAAACCATGATTTGAGCCTTCTGTTTCTGCGGCCTCCCAGACACAGA # Right flank : AAAAAGAGAGCCATCCGGCTCTCTTTTTCTTTGCCTATCATCGCGCCCTGCAAGCGCTGCATTATCTTGTGGCGCAAATCTTCTTCCTATGCTATAATATTAAACCATAGTATATCAATATGAATAGTATATTGGAGGAAGAATCATGAAAGACCATTCGCTTGAAGTGCACGGCTGCCATACCTACGATGCGACGGGGGCGATCAGTCCGGCGATCTGCCTGTCGGCGACGTTCCGTCATCCGCGTTTCGGCGAGAGCACGGGCTACGACTACGGACGCGTGGCGAATCCGACGCGCGAATCTCTCGAAAAGACGGTGGCGCTCTTAGAGCGCGGCGGGCGCTCTTGGGCGCTTTCCTCGGGCATGGCGGCGGTGCAGCTCGTTTTCTCTCTTCTTTCGGCGGGCGATCACGTCCTGATGAGCGAAGACCTCTACGGCGGCACGGTGCGTCTCGCCGAAGAAGTCTTTGCGGGCTACGGCGTCACCTTCGAATACGTCG # Questionable array : NO Score: 5.85 # Score Detail : 1:0, 2:0, 3:3, 4:0.79, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCATGTGACCTCATACCGCTTGCGGTATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [10,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-6.40,-5.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [46.7-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,4.91 Confidence: HIGH] # Array family : NA // Array 1 158646-164749 **** Predicted by CRISPRDetect 2.4 *** >NZ_GG698599.1 Selenomonas sputigena ATCC 35185 Scfld3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 158646 32 100.0 34 ................................ TTGATAGTATGCCCTTGGCACTTCTCTGCCTTTT 158712 32 100.0 34 ................................ ACAGTCCAAGAGTACGAACGGCAAGATGTTTGAA 158778 32 100.0 34 ................................ AACGGCCTATGATTCTCCGACACCGTTGAATGAA 158844 32 100.0 34 ................................ TACGATATTCGGCAGTTCCGCTTGAAAACGGCAG 158910 32 100.0 34 ................................ CACCAGGCACGCGCCCGCCTTCTGGCGGCAGGGC 158976 32 100.0 35 ................................ TGCTACTCGCGCGGCGGGGCGGGCGAGGCGCTTGC 159043 32 100.0 34 ................................ GCGCTGCGCGAATGTTGTCACCGATAGACATAAG 159109 32 100.0 34 ................................ TCTCGAAGGGCGTGCCGATGAAGTCGCTCAAGGC 159175 32 100.0 34 ................................ GTCGTGCTGCAAACAGCAAAGCCCCTCGTGCTGT 159241 32 100.0 34 ................................ CCCGGCGCGTGTAGCTCGGGGCGCAGGGGCGCGG 159307 32 100.0 34 ................................ GCGATCAAACTCGGGTTCGACCTCAATTTTCGGC 159373 32 100.0 33 ................................ TTTGTCGCCGCCTCCAACTTCTCTAACGGCTCA 159438 32 100.0 34 ................................ CCTGCCCGCCGCCACCGATGGCGCTCAAATTGCG 159504 32 100.0 34 ................................ ACCGCGTCCGTATCGTCGGCGACGACGCCGAAGC 159570 32 100.0 34 ................................ TTATGGACTTTGGCGAGCACATAGGCAAGGTTCA 159636 32 100.0 33 ................................ GTCTCCGTCGGAAGCGTACCGTTCGAGATGACG 159701 32 100.0 34 ................................ AGGCTTTCATCCGTCCGGATGCCAACCAGTTGTG 159767 32 100.0 34 ................................ AGCGGCTTAAATCCTTCCGCCTCAAAGAGCGGTA 159833 32 100.0 34 ................................ CATTGGCTGCCGAGCGGAAAAGGCATTTGCCATC 159899 32 100.0 32 ................................ GATACAGCCGCCTTAGACTGCCAGTCGTCCTT 159963 32 100.0 33 ................................ CTCTACGTATCGCTTGCCGTCAATATCATAGGT 160028 32 100.0 34 ................................ CCAAGACTTCCCACAGCCGCCGCACACTCCCTTA 160094 32 100.0 33 ................................ ACATCCTCCGCTGCCGCCTCGTCGTTTTTTCCG 160159 32 100.0 34 ................................ CGTCAAAGACGAAGGCCATATTCGCAGGCATTTG 160225 32 100.0 34 ................................ CTTGATGCTGTCATACAACAGCTTCATTTCCGGC 160291 32 100.0 34 ................................ CTCTCGCGTGCCACTGCGCCGCTCCGTCACGGTG 160357 32 100.0 34 ................................ TTATCCCTCCATATCTTGTATCTGTACTTCGAGG 160423 32 100.0 34 ................................ TGCGGTCATTTCGCGCGCAATCTCAGCGGTGCGC 160489 32 100.0 35 ................................ AAGAGCCACACCGCCCATGCGTCTATGATGGCGTC 160556 32 100.0 33 ................................ TTCAAGCCCTCGCTGGATCGTATCGAGCACTTC 160621 32 100.0 34 ................................ TCCATCGCCAATGCCGCCTCATACTGGCTGACAG 160687 32 100.0 34 ................................ GACCCTCCCCCCGGCATCAACATTTCCCGCCAAT 160753 32 100.0 34 ................................ CACAGACAGGCAAGACAGCGCACGATCCACCGCC 160819 32 100.0 35 ................................ TTCAAGCACGGCTCTAAAATCAGCGCCTTTGTTGC 160886 32 100.0 34 ................................ ATCCGCTTCGTTCTCGACGAGAGCGGCGACGATG 160952 32 100.0 34 ................................ CGATTCGTCCTCTGCGTCTGCAAATGCAAGCTCC 161018 32 100.0 34 ................................ TCGTGCCGTCGCTCGAATATTATCCTTCGTGATG 161084 32 100.0 34 ................................ AATCTCGCTGAGATGAGTTCCAGTGCCGTCCGTG 161150 32 100.0 34 ................................ AAAGCAGAAACGCTCGGACGGCAAGGCTTGTTTC 161216 32 100.0 34 ................................ GACAAGATTTTCCTTGCGCCACAGACAGCTCATG 161282 32 100.0 34 ................................ GGATCGCTTGTCGCGAGGCTGAACATCTCGCCCG 161348 32 100.0 33 ................................ TGCCTGTTCTTGCAGGCGTCACCGTTGTGCTCC 161413 32 100.0 34 ................................ CAGTGCCGTCCGTGTTTTCCCGGTGCCTTGTTCC 161479 32 100.0 34 ................................ CATTGACAATGTACTTTTTCTTCATCGTGGCTCC 161545 32 100.0 34 ................................ GCGTGTCGGAATGTACGTCGTATCGCAGCCGTTG 161611 32 100.0 35 ................................ GCTCCCAAGTAGCCGCAGCGGATGTCCCCGCAGAC 161678 32 100.0 34 ................................ GTCTGCGCCTGTCCACCGGCCGAACGGCCTGCTC 161744 32 100.0 34 ................................ GCGTGTCGGAATGTACGTCGTATCGCAGCCGTTG 161810 32 100.0 34 ................................ TCGGCCTCCTCCTCGTCTGTCGTCCGACTGCCCC 161876 32 100.0 33 ................................ GGCGCTGCAGTTTGTGCACGCCCGCCGAAGCGG 161941 32 100.0 35 ................................ GCGCGCTGCTCCCGGACGTGCAGCGGCGTTCGCAA 162008 32 100.0 32 ................................ GAAAATCTCGCGCATGTTTTTCTTGCGCCGAC 162072 32 100.0 33 ................................ TGCGGGCTCCATCCTCGCCTCGCCATCTCATCC 162137 32 100.0 34 ................................ GAGCCGCCAGCACCATGCGAGCGTCGTCACCTCA 162203 32 100.0 33 ................................ AAGTTATCAACTGTCTCTTGAGATACACCTGAC 162268 32 100.0 34 ................................ GCATCCGTCAGGCTCACGCCGAAAAGGTCGAGCG 162334 32 100.0 34 ................................ ACGACGGCGTTCTGCTGCCTTTGTGATTCACGCT 162400 32 100.0 34 ................................ GCTCGCAGTTCATAACAAGCGATGTAGGTGTTGG 162466 32 100.0 33 ................................ GACCTGCCCGGGAGAGCCAATCTGATTAACGTA 162531 32 100.0 35 ................................ CAGGACGCCGACCTCCTCACCGATGAGGAGGTCTC 162598 32 100.0 34 ................................ TCTTAATAAAATATAAAAATTGTTTCCGCGCACA 162664 32 100.0 35 ................................ GACGAGAGAATTGCTGAACCGCATGGGTAAGGGTG 162731 32 100.0 34 ................................ CGCTTCCGCCGTGTACGGGATATAAAAACGTGGG 162797 32 100.0 33 ................................ GCTGGATCGTGCGGGCTTCTTTTTCTCTCCCTC 162862 32 100.0 35 ................................ GACGAGAGAATTGCTGAACCGCATGGGTAAGGGTG 162929 32 100.0 33 ................................ GCTTGGCTCGACGAAATCGCCATGGGCTTGACG 162994 32 100.0 34 ................................ GCATGGAGGAAAACATATCTATACGTCGGGAAAA 163060 32 100.0 34 ................................ GATACAGAAAACGCAAAGTCCGTATTATTGCGGC 163126 32 100.0 33 ................................ ATATTTATGCAGGAGACCGTCAAGCACATCCAT 163191 32 100.0 34 ................................ TCGTCCAAAACAAGGCGCAGCACATGCTCCATAA 163257 32 100.0 34 ................................ TCCGATATAAGGAATAACGTTGTTATGGAGCGAG 163323 32 100.0 34 ................................ GCCGATGCGCATACCGGTATGGTATGCCAACATA 163389 32 100.0 35 ................................ GCCTGCTGGTACAATTCCAAGCTCCAGTTCAACCC 163456 32 100.0 34 ................................ ATCCGCGATCAGACGGGTGGCCGCCGCTGGTGGC 163522 32 100.0 33 ................................ GCGAGAGACGTGCGCCCCTGTCGCTTATCGGCA 163587 32 100.0 33 ................................ GGAAATGTGAGGGGGTAGGTCAGGTGAAAACAG 163652 32 100.0 34 ................................ TCGATACGATCATCCGCTACTGCTGTGAAACGGC 163718 32 100.0 34 ................................ GCATCCGTCAGGCTCACGCCGAAAAGGTCGAGCG 163784 32 100.0 34 ................................ GCCAAGGCAAGGGCGATCTCTGCCCTCTGCCGCA 163850 32 100.0 35 ................................ TTGCGCATCGGCATGGCGGAGAAGGAGCAAGCAAG 163917 32 100.0 35 ................................ TCAGCGCAAGAAATTGCTATTCTCGCCGAGACGAT 163984 32 100.0 34 ................................ TCTGCGTGAGCGGTTTTAAGTTCTCATGCCCTTT 164050 32 100.0 34 ................................ GGAAAAAATGCCAGAAATGAAAAATTTTTGACCT 164116 32 100.0 34 ................................ ATTCTGCTGGATAGCCGCATACTTCTGTCCTGCC 164182 32 96.9 34 ............A................... GGATACTAGCCTGCGGCAAAAAGCATCGTAGCAT G [164196] 164249 32 96.9 34 ............A................... CCGTTGACGGCGAAAGTGGGGCGTGGCTGATGCG G [164263] 164316 32 96.9 35 ............A................... TCAGCCGATCGAGTTTGCGCGTAACGGCGCATGGG G [164330] 164384 32 96.9 34 ............A................... TCCAAAATGGATATAAACTCGGTGATCGCCAGAT G [164398] 164451 32 96.9 34 ............A................... ATCTATAACAAGATGCTTGGCGACCGCCTTGACT G [164465] 164518 32 96.9 36 ........T....................... GGCGAAAAGCAATGTCAAACAGGATGGAAAAAGGGA 164586 32 100.0 34 ................................ CCGGGACAACGCCGCGCCAAAAGGACGCCCACGC 164652 32 100.0 34 ................................ TCGCAGTAATGTTTTGACGCAGGATGATTGGCTC 164718 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ==================================== ================== 93 32 99.8 34 GTCGCGCCCCACGCGGGCGCGTGGATTGAAAT # Left flank : ATCCGGCGTTTTTGTGGAAATAAGCAGGAAAGATGGAGGGGGCGGTGGAAATGTTGATTCTCGTGACATACGATGTCAATACGGAAACATCTGCCGGCCGCACACGCTTGAGAAAAGTGGCGAAGTGCTGCGTGCGCCACGGACAGCGCGTGCAGAATTCCGTGTTTGAATGTGTTCTCGATGAAGCACAGTTCTGCACATTGCGGCATGAATTGACATCGTTGATTGATCAAGAAAAAGACAGCCTGCGTTTTTATAACTTGGGCAATAAATATGCAGGAAAAACGCAGCACGTCGGTGCAAAACCAAGTTATGAGGCTGAAGGAACTCTGATGCTGTAGCAGGCATCTCCTTCGCGAGAATGGCCGCAAAATCTTTGTGCGAACCCGTATCACACAGAGGACTTTGCGACGAAAAATGCCTGTAACAGCATGGCCAAAAATGAGGTTCGCGAAAAATATAGCGCAACCGCTGTAATTAAGCCCGTGTAAACAGGCACA # Right flank : TCGGCAAAACGATCGGCCATCGCCACTGCGCGAGAGTCGCGCCCACATGGGGCGTGATACGCAGATAAGTGCGACGTCTAAAACGCCTGAAATATGGGCTTTGGCGAGTCTCCTGTGAGGCGTACTTGGTCGAGGAGGCGCGAGCGGAACATTTTGCGCAACTGTTTACTCAGGCGCTCGTAGCGCTTGATGAGATCGTCGGCTGCGACGGTTTCGAGGTAGGCGAGATTGACGGTTGCTTGCGGACGCAGGGCGACGATTTGCGCATTGAGCTCAGAATAGTGCATATCAAACTCCTCGCGCTGGATCAGGCCCTCGACGTAGAGTTCTTTGAGTCGTGCCTGCTTTGTCCTGAGTTCATCTATAGTGATGGCCTGCGCATCGGCACCGTGGGAAATCTTGTTGACGTAGGCAAGGTATCGCCGCAGCTCAAGCTCCAACGACGTCAACAGACTAGTCTTGACGTGATTTTCTCGCCAATATGTCTTGTGCGGGCACTC # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCCCCACGCGGGCGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCGCCCCACGCGGGCGCGTGGGTTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-10.80,-10.90] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [55.0-33.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.68,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //