Array 1 187223-185997 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADOFY010000003.1 Pediococcus pentosaceus strain FAM 18048 FAM18048-i1-1_scf3, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 187222 36 100.0 30 .................................... TTGTAGAATTGAATTTTGAATAATGATCGA 187156 36 100.0 30 .................................... GAATCGTTTCGGCTGTTAAATCCGGAATGA 187090 36 100.0 30 .................................... ACCAGGATGAGTTTGAAATCAGTCAACGAA 187024 36 100.0 30 .................................... GGCCGTTTCATCAATTTCAAACGTTACGTA 186958 36 100.0 30 .................................... CATTATTTTTTAGAATGTAAAAATAAGGCT 186892 36 100.0 30 .................................... CGTCCTTTTGAGACACCTGCATAGTTACCT 186826 36 100.0 30 .................................... TCTGATTAACATCACTTGTAACGGTAATTG 186760 36 100.0 30 .................................... ATTAAGCTCAATCCAGAGATTGCATCAGTC 186694 36 100.0 30 .................................... ATTAAGCTCAATCCAGAGATTGCATCAGTC 186628 36 100.0 30 .................................... ATCGCAATCAAGATATTTTGATTCAAATCA 186562 36 100.0 30 .................................... CGACCGGAATTTCAGACAGTAAAAAGGTGC 186496 36 100.0 30 .................................... TGATGTACTAGCGATTGTGCTAATTACCGT 186430 36 100.0 30 .................................... TACTTGTAAAAAATCGTTTTGCGGGCGCTA 186364 36 100.0 30 .................................... AATTCGGATGGTAGCAACCGATTGTGGTTG 186298 36 100.0 30 .................................... AGGGAATGAGACAGACGAATACCAGTGATG 186232 36 100.0 30 .................................... ATGTTTGTATCATCTAGTTTCTATCGTGCA 186166 36 100.0 30 .................................... TACAAAAAGCCAAAGGTTAGCAAAGTAACA 186100 36 100.0 30 .................................... GATGTTTTAGATTTTGAAGAATACACAAAA 186034 36 91.7 0 ...........A.................A..A... | T,C [185999,186006] ========== ====== ====== ====== ==================================== ============================== ================== 19 36 99.6 30 GTTTCAGAAGAGTGTTAAATCAATAAGTTCAAGTAC # Left flank : CAGAATTTAGTTTTAACAAAATATTTGCGCCAAATTGAAAAGTTATTTTTACGGTCTGTTACAGATGAACAGCAAAATAAAATTCATGATGAAATCAATCGTATATTTAACATAGTTTCCGAACAATTATTTTTACTAGATTTACCGATAGAAGTTAACTTTGATTTTGATCTTAAAAAGTTATTTAAATATTGCGGGATTCGATTTGATCCAATTTTAATTAGTAAACCATATGGTATAATTGAAACAATAATTAAAATTCATGAAACTAGTAATCTTGACTCGTGTATAGCGTTAACTAATGTAGCTCATTATTTAACGTCAGTCGAATTTGAAGAACTTAGCCAGTTAGTCAAAGAGACGAATCAAAAAATACTACTAATCGAATTCACAGAAATAGAAGAGCAGAGCTTCTATGGAAACGCTGAATTCTACTACATTGATACTGATTTTATTGATTGGCACAACTGAAACCATTATTTTTTTATGAGAAATTAATG # Right flank : AAACTGTACCCCCGCAACAACTTAGCCAGCTGTTGTAATTTTCCACAACTAGTTCGACAGTCCAAAATAACAAAAAGAATCATTTTAGCCACTAATACTTAGTGAAACTAAAATGATTCTTTTTGTTATTTAATTACTAACGGTAAAATAACGATCGAATTCATTAAAATATGAGCAATCATCGAAGTTTGAATACGTCCGGTCTTTTTGTACAACCAGCAGAATAGCAAACCAATGGCCGCATATAGAAAGATATGACTATCGTTGTGCATAAATGCAAAGGCTAGACTAGAAATGATGGCCATGACGGTGAATCCCAGCGTGGAATCAGCTCCAAACATTGCACTGAGGTTACCAAATAAAACTTTTCTAAAAACCAACTCTTCCATGATTGGAGCTCCCACGGTGATCGCTAAAATGAAAAATGGATTGGTTTTAGCCAAAGTCACCAAGGTTGCGGTGTTTTGAGAAGTAGGATTACTTCCAAAAATGATCGTAAT # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGAAGAGTGTTAAATCAATAAGTTCAAGTAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.68 Confidence: HIGH] # Array family : NA //