Array 1 61191-67045 **** Predicted by CRISPRDetect 2.4 *** >NZ_NEQB01000003.1 Acinetobacter baumannii strain KUSSH08 NODE_3_length_180691_cov_8.40078, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 61191 30 96.7 30 .............................A CTGAAAGAGTAACTAACTGTTTAAAGAAAC 61251 30 96.7 30 .............................A TTCCTATTTATTTTGAGCCTAATACACCAA 61311 30 100.0 30 .............................. TCCAACGAAATTATGACGCTGACAAGTCTC 61371 30 100.0 30 .............................. CACAAGACCATACTCACGAATAAATTGTTT 61431 30 93.3 30 ............................AA CAGGAACTTTTGCAGGTCGTAGCCAAAGAA 61491 30 96.7 31 .............................G ATTCCGAATTATTTGCGGATGAGAGCAGTAA 61552 30 93.3 30 ............................AA CAGGAACTTTTGCAGGTCGTAGCCAAAGAA 61612 30 96.7 30 ............................A. CGTCACAGCGCACTGGTTACTTAAAACAGG 61672 30 96.7 30 ............................A. CAACAACTTTATTAGCCTTCACAAGACCAT 61732 30 93.3 30 ............................GA TACGGGTAAACCGTATGAATGGGTTGATTT 61792 30 93.3 30 ............................AA AGATATTACTGGTGTATAGAGCTGAAGATT 61852 30 96.7 30 .............................A ATTCACTTGATGCAGGTGAATCAATATTAA 61912 30 100.0 30 .............................. TAGATACAGGCGTTGATTCTGCAAAAGTGG 61972 30 96.7 30 ............................G. TACCCAACCCTTTATCAATCTCTCGACCAA 62032 30 93.3 30 ............................AG GGTGCGCTTGCACGTCAAGAATATCTTGGT 62092 30 93.3 30 ............................AA CGAGATACTGTTTCAGGAGATTCACCCAAA 62152 30 100.0 30 .............................. TTTTTAAGTGTTTCATCCACAACATCATAA 62212 30 93.3 30 ............................AC CATCAATCGTGAAGCATCAAGGCGATAAAG 62272 30 96.7 30 .............................G CAAGACAGCTATATAGAACAGTTGGAAAAT 62332 30 96.7 30 ............................A. AACTTGCTTGTACGTTTCTAATCTTCAGTT 62392 30 93.3 30 ............................GG TGGAAAATGTACATAGACATTGCACCGAGA 62452 30 93.3 30 ............................CC CAAAGGCTCAAGAGTTGAGCGCGTCAACTC 62512 30 100.0 30 .............................. GCGAGTCAAGCCGACAAAGTAATCGCTATG 62572 30 93.3 30 ............................AC GGTGTCAGAGTTTTAGAACTCAATGATGGC 62632 30 93.3 30 ............................AG TTAATACCCGTTGGCCATATTGTTCAGTTT 62692 30 100.0 30 .............................. AGTCGCATTAGCGCAAAAGCTACGTGGATT 62752 30 96.7 30 .............................A ATGATGAAATCGATGAAATGTGGCGCTATG 62812 30 100.0 30 .............................. GTTGCAACACCGCCACCGCTGTGCCTTTTG 62872 30 100.0 30 .............................. CAATGTGTTTAAGATCGGGTCAAAAGCTAC 62932 30 93.3 30 ............................CC CAACTTTTTAAATATTTAATTCTTATAAGA 62992 30 93.3 30 ............................AA CGAGAAATTGGAACTACAAAAGAACCAAAA 63052 30 93.3 30 ............................GA TTATTCTGGTTATAACTTTGTCTGTGTAAT 63112 30 96.7 30 ............................A. CTTCCGCAATGGCCTTTTTGAATGCTTCAT 63172 30 93.3 30 ............................AG CCACGTCAACAGCAGCATTGGCATTAGTAA 63232 30 93.3 30 ............................GC TAAAGGCTAAAGCAACCAAGGTGAATCTTA 63292 30 93.3 30 ............................GA CGAGCAACACGTCAACGAACTCAAAGCAAA 63352 30 93.3 30 ............................GA CATGGCGAGTTGCAGCAGGAATACCATAAT 63412 30 93.3 30 ............................GA GTAATGCAGCACCAACAGCAGTAATCGCAG 63472 30 93.3 30 ............................CA AACGTGGGTTACATCTAGTTGCCTGAGGAG 63532 30 96.7 30 .............................A ACTTAGACTGAATATCTGATGCTAAAGATT 63592 30 93.3 30 ............................AG CCGGTGTTGATCTGATATGCGTTAGCCATT 63652 30 96.7 30 ............................A. ACGCGCCAAACATGAATGGGTTTAAAACGT 63712 30 100.0 30 .............................. TGTGCCTCAATATGATTTCAAATATGGTTT 63772 30 93.3 30 ............................GC CAGGGGCAACATACCGCGCTAACGTTAGTG 63832 30 93.3 30 ............................GC AGTATTGACTGTCGGACTTGTGACAACCTG 63892 30 93.3 30 ............................GA CAGGAACCGTCACTGAAAGCGCACAGGCTC 63952 30 100.0 30 .............................. GTAACAACTTTAATGGAGAAGCCTTAATCT 64012 30 96.7 30 ............................A. AACGAGAAGCGTTGCGTAGACTTACAACTC 64072 30 96.7 30 .............................C TTGTTATTTCTGGTAATAAATATCAGAACA 64132 30 96.7 30 .............................C AAATCTAAGCCATGCTCATTAGGCATAGGT 64192 30 96.7 30 ............................A. CCTGTCTCTTGGTCAATCTTGGCACGTAGG 64252 30 96.7 30 ............................A. TACCGACTGATTGTTGAGTGGCAATGTTAA 64312 30 100.0 30 .............................. ACACATGAAGTCAGCAAATGCCACCATGTT 64372 30 100.0 30 .............................. GAATCGGCCGCTTTGCGTATAAACACCACC 64432 30 93.3 30 ............................GA GAATGATTTAAATTGCATTAAGCCTTTAAA 64492 30 96.7 30 .............................G GAAGTCATGAATGTAGGTGTTGAGGATGGC 64552 30 93.3 30 ............................GA ATTGCACTTGCTAAGCCAATAATGCCAACT 64612 30 96.7 30 .............................G ATGCGGGTTGTCCACCAGTTATGACTACTT 64672 30 93.3 30 ............................CC AAGCTGTGAATGTTGGTAATGCTTTAAGCG 64732 30 93.3 30 ............................CG TCAAAACAATCAAAAAAGCAATGAGTACAA 64792 30 93.3 30 ............................AG TGAATGGGATTTATTCGCAAGGTGATATTA 64852 30 100.0 30 .............................. GTTTCAGTTGCATAGTCAAACGATGAGAAC 64912 30 96.7 30 ............................A. TAGCAGGTGATTACGCAGTCTTATCTAATG 64972 30 96.7 30 ............................A. TAAGCAAGGGCTGACCCCGACCGCCGAGCA 65032 30 96.7 31 ............................A. TGACTTACAGCGTTATGAGAGATCCCTAGTT 65093 30 96.7 30 .............................G ATGATTGGATAGAGATTCATGCGTTAGATT 65153 30 96.7 30 ............................G. AAAAAAGAACATTTCCCGCCAAAATTGACG 65213 30 100.0 30 .............................. TGGCAACCAGTCGCCCTATGCGACCTGATA 65273 30 96.7 30 .............................G TAAAAAAGTTTAATAATTTTTTCAGTGAAT 65333 30 96.7 30 .............................A CAGCAATAACGACCAAACCGATATAGGTAA 65393 30 96.7 30 ............................A. ACGAACATCATTTACTTGCTGAAGTTGCTT 65453 30 96.7 30 ............................A. GCTCTCAATAATTCGCAAGTAAAAGTGGAT 65513 30 93.3 31 ............................AA AAAGTTTTTTTGACAATCAAGCCGGCAAGTT 65574 30 96.7 31 .............................G CATCGAAGTCATAGAACGCTTTGAGTTTCCA 65635 30 93.3 30 ............................GC AAGTGTCACCTTTAAGTGCACGGAAGAAAT 65695 30 96.7 30 .............................C CATTCTCGCTAAGTGGCATCACACGCGATG 65755 30 100.0 30 .............................. GGTTGTTTAGTAAGTTCAAAGCCCGTTGTA 65815 30 93.3 30 ............................CA ATGGATTTAAAGATTTCAACCGCTTGGGAG 65875 30 93.3 30 ............................AG TTGATATGATTATTAATATTAAAGTTGTTT 65935 30 96.7 30 .............................G TGCCCATTCCCGCAAACACGGCGCAACGCT 65995 30 93.3 30 ............................CA TGACCCAACCACGTAAATTCATACCACACG 66055 30 93.3 30 ............................GC TCCGTAATTAATCAAGAAATAATCAAATTT 66115 30 93.3 30 ............................AG TAGTTGCACCAGACTCCGCACAATCTAAAA 66175 30 93.3 30 ............................AG CAAATAGATCAACTGGTGCGCCCTATGAAT 66235 30 96.7 30 ............................A. CATCGAAATTTAGTTCTAATTCTTTAATTT 66295 30 93.3 30 ............................AG TCTTTAATGTCGGCAACATGCTGTGCAAAA 66355 30 96.7 30 ............................G. AAATATGCTGCTTTAACCCGCCAAACGAAT 66415 30 96.7 30 .............................G CATTAAGACGAATGCGGGCAATTGGTAATG 66475 30 93.3 30 ............................GA GATTCAAGTTTCACCGGATGGCACAAGTAA 66535 30 93.3 30 ............................AC CAGAAAAGCAGAGTAAAGCTTCACAGCCAT 66595 30 96.7 31 ............................G. AAAAAAGAACATTTCCAGCAAAAATTGACGA 66656 30 100.0 30 .............................. GCTGCCTGCAAACTTGTTTGGGGCTTTATG 66716 30 93.3 30 ............................AC TGGAATTCAGCAGTAAATAAGGGGTTAAGA 66776 30 100.0 30 .............................. TAAAGCTAAATGAGGGTTAAACCTAAGAAA 66836 30 90.0 30 .......T....................AA CGTGAACAATTGTTTTAGCTTTGAACATTA 66896 30 90.0 30 .............C...T..........G. TACTGGGTTGCGGAATATATTCGCAATTAT 66956 30 86.7 30 A......A.........T..........A. TTTGATCTTTACTTATTCTCGCTTCAAACA 67016 30 73.3 0 .......A...T.....T..C...AGCG.. | ========== ====== ====== ====== ============================== =============================== ================== 98 30 95.4 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCCTAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : TAAGATAAACAATAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTAAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGTAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCTACCAGCCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGCCAAAGTGACGGTGAAATTACCGATGCAAAATCGCAGTTACCAGAAGGTGTCATTATTGGCCGTACTTGCTTAAACTCTTTAGAGCTTGCTCAAAAAGCAATTGCCGATGGCGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAAC # Questionable array : NO Score: 5.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.77, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.20, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.10,-6.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-14] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //