Array 1 5445-257 **** Predicted by CRISPRDetect 2.4 *** >NZ_BJFJ01000012.1 Bifidobacterium moukalabense strain EB43 contig_11, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================== ================== 5444 36 100.0 39 .................................... GGCGGTGCGCGTCGCGCTGCACGGTATAGGTTGGCTCCC 5369 36 100.0 38 .................................... TTTGTTCAGACGTGCGACTACGTGAACGCGCAAACCAC 5295 36 100.0 36 .................................... TCGTATGTACGGGATGCGGAAAGATGGTTTCAGCAA 5223 36 100.0 36 .................................... CACCGACAGCAGAAACATTGCTTTTAAGCATTTCCA 5151 36 100.0 36 .................................... AAAAAAATGCGGGTTGACGTGAGGTATACCGTCAAC 5079 36 100.0 38 .................................... CAGTAGCGCGCGTTCGGATAGAGCCGCAGGCTGGCGAA 5005 36 100.0 35 .................................... TGGCGGTTTGCGTATCAAGCCCCGCATTGGCATTG 4934 36 100.0 36 .................................... TGCCAAACGTGTTGGACAACTGGCCCGCCATACGAA 4862 36 100.0 36 .................................... AGCGCTGACCAATGCCAATGCTAGCGCGGATACCGC 4790 36 100.0 36 .................................... AGTGGAAGAATAATAGGCATTCAGAAAACTTTCCGT 4718 36 100.0 35 .................................... GAACGCGGCATGCGAGACGGCTTCGACTCCGCACA 4647 36 100.0 36 .................................... GCGCACTATCGGCGGCGCTGCGGAAGAATCCGGCCG 4575 36 100.0 36 .................................... ACGAAAAAATATTTGCAATCCAAGAAATTGCAAGAA 4503 36 100.0 37 .................................... TGCGCCGAACACTGCTGCGGCACTTGGATATACACCA 4430 36 100.0 36 .................................... CTGAACTTCCCGATTCTGTACCGTGACTCCTCCGCA 4358 36 100.0 36 .................................... CCAACACGTTGGAGGACGAGCCGGACAGAATCAAGA 4286 36 100.0 37 .................................... CTGCAAATCCATGCTCTCGATAGCCAGGAACATCGAC 4213 36 100.0 37 .................................... TGGACTTCAGTGCGGACGGCACCGGCATTGGCATCGG 4140 36 100.0 42 .................................... TCGCGGTGACCGCCAGCTGGCCAGTCTTCTTCGCCTCCTCAT 4062 36 100.0 38 .................................... GGCCAACTTCACATCATCTCCGTCGTTGGATATGCGCG 3988 36 100.0 36 .................................... GATTTCCATCTGCTCTCCAATGGTCGACTGTGGCCG 3916 36 100.0 35 .................................... GGACGAAAAACTGCACTTAAGCTCGAATTATTATC 3845 36 100.0 37 .................................... GGGAACATGTGCGAGATATGACGGCGGTACCAACAAG 3772 36 100.0 35 .................................... GCGGCGACGGCACGATCTACCAATGGGTGGACGAA 3701 36 100.0 35 .................................... TAATGTTAACGTAATAGGAATTACTATTAACATTA 3630 36 100.0 35 .................................... TGTTAATGCTAGCGCAGATACCGCGTTGACCAATG 3559 36 100.0 36 .................................... TCGCCTCGCCGGATATGGTAGCATCCATCTCAGATC 3487 36 100.0 36 .................................... CCTCTTGATTTATCCCGACTTGCGTAGCCGGACGGC 3415 36 100.0 37 .................................... GCCAGTGTACGACGGTGAAGCCGGGTGGCGAACTGCC 3342 36 100.0 35 .................................... ATACGTGTGGCTGATCTATCCTGGCTACATCCTGT 3271 36 100.0 38 .................................... GCGCGCTACGCCCAAGACAACGAGTTCCTCGCAGACAC 3197 36 100.0 39 .................................... GGCGGCGGGCGGGACGTCGAGCGATGAAATCAGCTTCAA 3122 36 100.0 35 .................................... AAGACGTCGGCGCAGGAACTGTATTCGCTCGTATA 3051 36 100.0 35 .................................... CTTCTTGGCTTCATCATCATCACGGTTCTCATGCT 2980 36 100.0 36 .................................... GACAGGTCAACGTCGCTCATACTGCACAGCTGCAAC 2908 36 100.0 36 .................................... ACGATCACCTGCGAGGCGAGACGCTACTGTGGCAGC 2836 36 100.0 38 .................................... ACCATGCTGGACAACCTCAAGCTCGGCTACGGCGGCAC 2762 36 100.0 37 .................................... TGGAGGCCCGCCATCGATTCCTCCGTCGTGCGGTACG 2689 36 100.0 39 .................................... GAAAATGAGGGAATCGAGGACACGTACACGGTGACTGAT 2614 36 100.0 40 .................................... CCACGAGCCGAGCCAACAACGCCAATTATATTGTTGCGCA 2538 36 97.2 35 ..............G..................... ATCGACCCACAAGCCGGACGTAGGCGCCTCGAAGA 2467 36 100.0 37 .................................... CAAAAACTGCATTTGCGTGTTGGTCAAACGCATTTTC 2394 36 100.0 35 .................................... GTGGCCGACGTGGCCGGCGAGATCGACCCGGCCAC 2323 36 100.0 38 .................................... GCGTTCATGTAGTATTCCACCTGAGCGGTGGCCGACTC 2249 36 100.0 35 .................................... GGCGATATTCTGCGCTCTGATACTGCCGTTTGGTC 2178 36 100.0 36 .................................... TGCTTCCTGCCTTGTGATTACAAGTATATGATACTT 2106 36 100.0 36 .................................... ATTGGCGCTTACCGTGGCCGCGAAACCCTCGCACAC 2034 36 100.0 35 .................................... GGGATTTGGAGGATTCGTGCGATGTCGTGCCAGTC 1963 36 100.0 39 .................................... TTGATTCAGGGCCATGCTGCTGAGTTGCTGAAGATGGCG 1888 36 100.0 36 .................................... GCTTCTGCCAGTCGAACAGGGATGGGTGGAGCTGCT 1816 36 100.0 34 .................................... AGTGAATTAGCGTGAAATCGAAGAGTGGCCGGAA 1746 36 100.0 36 .................................... AGGCCATTGTCAACGACATGATGTCTCAGCCTGTAC 1674 36 100.0 36 .................................... ATCAGCAACGACCGACTCAATATCAACAATGCTGAC 1602 36 100.0 36 .................................... GGAATCCCATGGTTTCCATCTGCTTTCCCTCCATGC 1530 36 100.0 37 .................................... TTCGACGAATACTGCGATGCTGAACTGTGGATTAAAA 1457 36 100.0 35 .................................... CTGGTGGTGTACGGTCCGAATGGGGACGTGGCGAG 1386 36 100.0 38 .................................... GCCTGTCCGCGCACGTAGGTGAATCCGATGCGATTCAC 1312 36 100.0 35 .................................... GCGTTCCTACTTCACGAGGAAGGATTTGGACGCTT 1241 36 100.0 36 .................................... GAGACCGCGTTCAACATCCTGCCGGGCGAGACCTAT 1169 36 100.0 41 .................................... CAGTGGGTGGACGAAAACAACGGTTCGTGGGCCGACGCCAA 1092 36 100.0 35 .................................... GGTCAGTACGCCAGCTTTACCGTGCAGGCGAAGGA 1021 36 100.0 35 .................................... CAGAGGTAGTCGGCGTGGACAGCTTCTTGTCTACA 950 36 100.0 36 .................................... TAATCGGTGGCTTGTTCATGGTTTCCTTTCGGTGAT 878 36 97.2 34 .C.................................. GTGAAGTACCGTCAGCTGATCTCCGTGACCAACA 808 36 100.0 41 .................................... CAGCACCTACGCCAGCCGCTAGCAAGCTCCCCGACAATCTC 731 36 100.0 37 .................................... GCGGCATCGAACGCGGTGGACGTGAAACAATCACAAA 658 36 100.0 36 .................................... GTGATCACCGGACGCTCCGGCAAGACCGACGACCGC 586 36 97.2 37 .........T.......................... TGCCTCGTCACAGGCTGGACATGGGGAAATCGTCTAC 513 36 97.2 36 .........T.......................... AGGATCCAGGACAAGACCTTCACCGTCACGGAGAAA 441 36 97.2 34 .........T.......................... CTCCTGAACGTCACTGAAACCATCGCCAACGGCA 371 36 100.0 35 .................................... TACACGCATCCGGGGAACAAGCTGGGCGTCTGGCT GGACTCGT [341] 292 36 97.2 0 .........T.......................... | ========== ====== ====== ====== ==================================== ========================================== ================== 72 36 99.8 36 ATTCCTGAGCTCTAATGCTCAGGACTTCATTGAGGT # Left flank : TATTTAGTTGCATATGATGTGAGCGATGATTACCGTCGCAGTCATGTAGCGAAGATTCTTCAGCATTATGGAGAACGGCTGCAATACAGTGTTTTTCTGTTGCAAGTGCGCCCCTCAATGATGCTCAACGTACGCATGAAGATTGAGAAAGAGATTGACTACGAAACCGATTCCGTTGTGTTCTGCTCATTGGGGACAATTGCGCAGACGGAAGAGGGATTGGATTTTCTGGGGCATCGAGGATATGCAGACTTAGAAATTCCCACAATTATTTGATTTCAGTCAAAACGGCTGGGCTGTTTGATAACTAAAGAGTGTTTCGTCTTGCATGCGCACGAGAGGTGAATCACTTCCGAGACGCGCGGCAAGCGCTCGCATGTGGAAAATGGCGTTTCTGTGGGATTCAGCGTTCCCAGATTCGCATTTTTCATAGGGTATGAAGTACATCGCTCGCATAATTGCTTGAGATACATGTCACTACAACGCTCTACACTGAGACT # Right flank : TCGCAGTAGCGGCTTTGCGGCGAAAAGACGAACACCGCGTTTCTCTTTTCCGCCTGCTATACTGGCTCGTGTTTCTATGCCTTAGAAATACGAGCCAGAAAGCGGGCGGCGGCCATGATGCCTTATCACCTTCTTTCCGTTTCACGGGTCTCTGGCGGATCTGCAAATCCGTCGGAGACCCTTCTTCCTTTACGTCTCCTTATCCTATACCTTTTACTCCAGAAGGCAAATCCATCGTCGCTTCTACGACTTAATCA # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTCCTGAGCTCTAATGCTCAGGACTTCATTGAGGT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.30,-7.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [10-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [45.0-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.05 Confidence: HIGH] # Array family : NA //