Array 1 26159-25615 **** Predicted by CRISPRDetect 2.4 *** >NZ_QHJO01000003.1 Streptomyces sp. WAC 06725 AA000228-3_WAC06725, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================================================================================================================================================================================= ================== 26158 29 75.9 199 .A.....T......AT.......CAC... CACGAACAGCGCAGGGCACGGCAAATGCCCCCGGCTCGCCCCTGCGGCTACGACGAGGAGCCGATGTGGGTGCTGTCGCTTCTCGTGAACATCGAACACGGCCCTGCCGGGGCGCTGCCCGAAGTCACGTACATGCGCTGTCGGAACTCGTGAACAGAGCCATTCCCCAGTTGCGCGCGATGCGGGCAGTCGAGCAGCT C,T [26138,26148] 25928 29 100.0 32 ............................. CGTCGCCGAGGCGGAGCAGCGCGCCAGGCAGC 25867 29 96.6 32 ............T................ TCCGTGGCCGCGGGCAACGCGGTGCTGGAACA 25806 29 96.6 33 ............................G GCCGGCGACGCGGGCGAGGATCGGTTTCGGCCG 25744 29 86.2 72 ...........C..C.........GC... TCAACAGAGGACGACGAAGTACTCAGGCAACGGTGGTCCCCGCGGTCGAAGGCAGACCCGGCGAACCATTCG 25643 29 89.7 0 ............T..A...A......... | ========== ====== ====== ====== ============================= ======================================================================================================================================================================================================= ================== 6 29 90.8 74 GTGGTCCCCGCGCGTGCGGGGCTGTTCCC # Left flank : TGAGGGATGCGCACACCGCCAATGACCTCACGCCGCGGCAGTTCCATATCCTCGGGCTGCTCCACGATCACGGTCCGTTGGCGCAGACCGACCTGGCCGCCGAGACAGATACCGCGGCCAGCGTGCTCGTCACGCAGCTCAATCCTCTGGAGGCCGAGGGACTGGTGACGCGCACGCGTGACCCTCGCGATCGGCGCCGCCACCTAGTCGTGCTGACGGAGGCGGGACAGCAGCGGCTGCAAGACGCGGCAGCCGCGCAGCAGGAGGTGGAAGACGGCCTCTTCCGCTCGCTGACCGGCACTCAGCGCTCGCAGCTGGCACAACTCCTTGTCCTGGTACGCGACGATCTGACCGACGGCAACGAGCACTGTGGCACCCCGACCTCTCTCGACAGGAAGACGTCGTAAAGCCGTGAGTGGGGCGGGCCAGGAGCCCGAAGTGTTTTCGGGCCCGGCCGACGACGGGCCCCCTTGGGTACGGCCAGGCAACTCGGCGACCAC # Right flank : CCCTCCACCTGACTGCTCCTACGGAGAGGGACCATCCGTGTTCGTGCGTCAATGGCGCTGCTTGTTGTTCCTCACCGCTGAACGCAGTACACCCCTGATGCGCCACCACAGCTTGCGGGCCGGTGGAGTTTCAGTGGAGTAGTTGTTGCCGAACCGGATGTCGACCGCGGTACGCCTCAGGGGGGTGCCTTCGGGCGAGTACCGCGGGGAGGGGGCAACCATGTGCTTCTCCTGCGGATTCGGAGGCCTGGTCCCGCTTCTTCGGCTGCTGCCCATGTGCTGCCTTGGGCCTTCTGCCCTGGGCCTTGTTCTACGAGCGAAGCGTAGAACCCCGCACTTGATGTGAGCACCGCGCCACGTCCACCGGACACAGGTACCGGCGGTGCCGCGAGGTGTACTCCAAACGAGCCAGCGTGCGCGGGTGTTGCTTGGGGTGGGTGGGGCCTGGCTCGTCCGTGGAGGGCCGTGTGGGAGAGCGCTCTGTGGTGTCCTCTACCTCT # Questionable array : NO Score: 2.96 # Score Detail : 1:0, 2:3, 3:0, 4:0.69, 5:-1.5, 6:0.25, 7:-0.79, 8:0.8, 9:0.51, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCGTGCGGGGCTGTTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,0] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCGTGCGGGGCTGTTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [36.7-36.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,4.91 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 5907-2660 **** Predicted by CRISPRDetect 2.4 *** >NZ_QHJO01000419.1 Streptomyces sp. WAC 06725 AA000228-416_WAC06725, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================================================== ================== 5906 29 100.0 32 ............................. CCTCCAGGACCGGCCGAACGCTGGCTGCCTTC 5845 29 100.0 32 ............................. AGTATCCACATACGCAACGGCATGCCCGCCCG 5784 29 96.6 35 ............................A ACGTGGCCGACCTGCCCGGTATGCGGGCGGATCAG 5720 29 100.0 32 ............................. AAGACACGTAGCCGCCGCTCGGACCGGTTTCC 5659 29 100.0 32 ............................. AAGCCGAAGCCGAAGCCAAGCTTCGCCTCGAA 5598 29 100.0 32 ............................. GCGCCATCGCCCTGGCCACCACCGCCGCACCG 5537 29 100.0 32 ............................. CCGCACAGCAGGCGTTCCTGTGCCTGGTCGCC 5476 29 100.0 32 ............................. TGCTCACCTGCCTCCTCCTGGGAGCAGCAGCT 5415 29 96.6 32 ............................T GCTGAGCGGACGGATCAGCGTCGGTGCCGTCA 5354 29 100.0 32 ............................. GTCCTGGTCGAACTTGACGAGGACGTCGACTA 5293 29 100.0 32 ............................. ATGAGGCCGTTGTGACAGCACTAACGAATGTG 5232 29 100.0 32 ............................. GCCACTATCAACGCCGCCGCGGCCGCGGGCCT 5171 29 100.0 32 ............................. TGCACCGTCGCCAACGCCAGGGCGGCCATGGG 5110 29 100.0 32 ............................. GATGCAGCCGGACCCGAGCGCGGTAATGAGCG 5049 29 100.0 32 ............................. ATCCAGTCCAGCAACCGGTTCTCCGCCGTGTT 4988 29 100.0 32 ............................. GCTGGAGCGGGGTCCGGGTATCGGTCCCGTTC 4927 29 96.6 32 ..A.......................... CAGCGGGAGACCGGCGGGTACTCGAAGTCCTT 4866 29 100.0 32 ............................. TGCTCTCCGAAATCCGCCTGAACGAAGCCGCC 4805 29 100.0 32 ............................. TCCGTCTTGGTCATCCGGAGTAGGAACCGCTG 4744 29 100.0 32 ............................. CCGCTCATGGGCCCGTTCTTCCCGGACGCGGT 4683 29 96.6 32 ............................T TCGGCGGTGCCGTCCTGCCGGATGATCCAACC 4622 29 100.0 32 ............................. ACCAGGTGCCAGGCACCCGGGTGCGCCCACGG 4561 29 96.6 32 .......T..................... GGATCGCCCCAGGCGTGGCTCCAGATGACGGG 4500 29 100.0 32 ............................. CGCTCCTGCCTCTCGCCGTACTCCATCTGCGG 4439 29 100.0 32 ............................. TCCAGCGCAACGTCGGTGGTGTTCAGGCCCTT 4378 29 100.0 32 ............................. CGTTGCAGAAGGTACGGCGGAGCAGGAACCGA 4317 29 100.0 32 ............................. GGCGTCCCCGCCACCCTGAGCGATCTGCAGGC 4256 29 100.0 32 ............................. TGGGATGCTCGAAGCATCCCACCACCCTGACC 4195 29 100.0 32 ............................. TGGGTGCTGTACTCATTGATCGTGTCGAGCAA 4134 29 100.0 32 ............................. AGAGCATGGGCGGCGGCCAGTGGGTCAAGCCT 4073 29 96.6 32 ............T................ TCCGAGGCCGCTGAAGTCCGGGAAGCAGTGTG 4012 29 100.0 32 ............................. GCGCTGTGGCATGATCGGGCCCCACCAAAAGC 3951 29 96.6 32 ............................A CAGCGTCCGCTCCCGGTCGTCGCGGGGCGCCC 3890 29 100.0 32 ............................. AAGCGCAGGACCCTGGTGGACCGGACCCCCTC 3829 29 100.0 32 ............................. CGCCTCAGAACCGCCTCAGCTCCGTACTGAAG 3768 29 100.0 32 ............................. AGCAGCGCGCCGCGGGTGATGGCGGCGTGATC 3707 29 100.0 32 ............................. CCCGTGCCGGTCAGCAAGGTCGTACGCGCGCC 3646 29 100.0 32 ............................. GCGACCACCTTGAGCAGCTCGTCGAACATCCG 3585 29 100.0 32 ............................. CAGCCGTGATCCTTCGTGGCTTCGATCTCGGG 3524 29 100.0 32 ............................. GGGCCAGCGGTCGATGCCTCGTTCCCGGTGAG 3463 29 100.0 32 ............................. CGCTCAGCCTCTTCGACCGCCGGCGCTCCGGC 3402 29 96.6 32 ...........C................. TGGATCGTGGTCCGGGTGCCGTCGGCGGCTAC 3341 29 100.0 32 ............................. AACAGCAACACCGGAGGCCGGGGCCCCTTCCG 3280 29 96.6 32 ............G................ ACCTTCAGCCGCGACAGCCTGGTGGTGCCCAG 3219 29 86.2 33 ...........C..CA......C...... CTGCCCGACGATTCCCGCAACGGTGCATCTGGT T [3193] 3156 29 82.8 32 ...........A....T.AC..C...... GGTCACACGCTTGACGCACGACCTATGAGACG G [3146] 3094 29 79.3 32 ....A..T.....A.....A...AC.... TGGTGGCAGGGAGCCAGCATTTCCGACGGCGC 3033 29 75.9 32 AC..........G.C......G..AC... TGGGTCTCGTGCTACGCCAAGCGGATAGCGCA 2972 29 96.6 32 ...........C................. AGGTCGGTCCAGGCGAGCTTGGCCATATGGGA 2911 29 100.0 32 ............................. GGGCGCTACACCCGCTCGTACGAGGACCTGCC 2850 29 96.6 32 .................A........... AGCGCCAGACCGGCGCCGCGGGCCTCCTCTTT 2789 29 100.0 72 ............................. GCGGCGGGGCCTGCGCCCAGCATGGCACGGGGTTGGTCCCTGAGCGTCCCGTTGAACGGGCCGGAACGATTT 2688 29 82.8 0 ...........C..C.....AT..G.... | ========== ====== ====== ====== ============================= ======================================================================== ================== 53 29 97.5 33 GTGGTCCCCGCGCGTGCGGGGCTGTTCCC # Left flank : ACCCACCCCAGCCCCCGAAACAGAACTGGAGCAAAGCCGCCCAACGCCGCAGATACGGCCGCCGTTAACTACCCCGGCCCGCGTCCCGCGTCCCGCATGAATGGAGCAGCCCGCCAATGCCGGAATATATGCCTGTTATGTCAGAATCCCTGGAAGTAAGCAAAACCCCCTACCTCGCCTGACAAAGCCGCTGGTCACGACC # Right flank : ACACCACCGCCCCGCACACCGGACGCAGGTACCGGCGGCGTGCCGGGTGCATACCCGGTGCTCGCGGGAGGCAGCGCACCCCGATCAGGGGAACAGGAGCATCGGCCACGGCACAAACCAGCTCCGCAGGGCACGCTGTCTCGCGGGGGCGGTGGAGAAAGCCTGTGGATGCTGTCGTGTACGCCGCGGGCTGACGTTGCGCAGCGAATGGTCGTTCGGCCTGGGTCGTTAAACCCCGGTTAAGCAGCGGTGCAGGGCTGCCTCAGCGTCCTTTAGGTGTCTGCTGGCGGTTTCTTGGCGCTGGTGGCGTGTGCTGTGGCTGTTCTGCTGCCGGTGCCGAGGAGGCTTCCCATGGCCGCAGCCCGACGAACGCGCGATCGGAGATACCGGCGCCTGCCGCTGGACCTGGTACGCGAGGAGTTCACCCGCCTGGCGGACGGGTCCAGCCCGCCGGTGGTGGACGGGACGGCGTTCGCCGGTCTGCCCGACCGGGTGCTGGG # Questionable array : NO Score: 6.15 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCGTGCGGGGCTGTTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,0] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCGTGCGGGGCTGTTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [28-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [25.0-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,5.18 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //