Array 1 903516-902646 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAASMA010000012.1 Citrobacter koseri strain 20112523 Contig_15_98.8567_pilon, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 903515 28 100.0 32 ............................ CCGCGCGAAGTATATATATAGTTTATAGTTGA 903455 28 100.0 32 ............................ ATTCCCGGCTGAGCATTGACGATCCAGTCATC 903395 28 100.0 32 ............................ GTTACGCGCAAACTGCAAAACAAGACGCTAAA 903335 28 100.0 32 ............................ ACAAGAGACAGGATCAGCCGATGGAACCCACT 903275 28 100.0 32 ............................ GAAACCGACAGACAGCAATGGCGCGTTAGTTT 903215 28 100.0 32 ............................ GATCACCTGCGCGACGTGGCGGATAACGCGCA 903155 28 100.0 33 ............................ CGGTACTGGCGCCACCACCACCAGCAAAATTAT 903094 28 100.0 32 ............................ GCGCGGGTCGCTTCGGTGTACGTTGTATGCGT 903034 28 100.0 32 ............................ TGTCATATCGTCGTGATTTCTTCAACTTCAAT 902974 28 100.0 32 ............................ TATACCAGCAGCGGATCCAAATCCCATACAGG 902914 28 100.0 32 ............................ GATCCCGAAAGTGACGAGAGCAACAGCGACGA 902854 28 100.0 32 ............................ TCGCCCCGGCGCAGACTTTCGGGCAGGGCGTT 902794 28 100.0 33 ............................ GGAAAATTCCTTATCGAGGGTGTAGAACGGAAT 902733 28 100.0 32 ............................ GGTGCAACCAGCGTCTCCGACGTAATCAATGT 902673 28 82.1 0 ................A.....ACC.C. | ========== ====== ====== ====== ============================ ================================= ================== 15 28 98.8 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : GATCAGAAAGGCGTCTCCCTGGAAGTGAGTCAGGAAGCGCGTGACTGGCTGGCAGAGAAAGGCTATGACCGCGCGATGGGCGCACGTCCAATGACGCGCGTCGTCCAGGACAACCTGAAAAAACCGCTGGCAAACGAGCTGCTGTTCGGTTCGCTGGTTGGCGGCGGCCAGGTGACCGTTGCGCTGGATAAAGAGAAAAATGAGCTGACGTATGGCTTCCAGAGTGCGCAAAAGCACAAACCGGAAGCCGCGCATTAATCTCGTAACCGGTAAAATGTGAACGCCAGTCGCGTTCAGATAAACTCGCTGAAATCCGTAATCTCTTTTGAGGTTACGGATTTTTTTTGCCGCCATACCCCGGATACCTGAAAACCCTTTTTTTGAGTGTTTTTTTAACGCTATGATTTTTATGTGTTTATATTAGGTGGCGATAAAAGGGTATTTAATCATTTCGTTGATATTTTTCTTTATTAACACCATGATAGCGACGAACAGCTTCA # Right flank : CCACAAATGTAATTATTTATTTTGAAAGCTCTTTTGTTGATTTTTATCATTTCATCTGCCGGAGCCTCATCAGTACTATCGATAACACATAAAATGACGGGGTTTAAATAGATATGTCTGCAAATTCAATTATGCCTTCGGATTTAAAAACCATTCTGCACTCTAAACGCGCCAATATATTATCTTGAAAAGTGCCGTGTGCAGGTAAATGGTGGGCGAGTTGAATACATTACGAGTGCAGGTAATGAATCATATTACTGGAATATTCCTGTCGCGAATACTACGGCGGTGATGCTGGGTATGGGCACGTCAGTGTCACAGGCGGCGATGCGGGAGTTCGCAAGGGCTGGCGTGATGGTTGGCTTCTGTGGCACTGATGGTACGCCGCTTTATTCCGCAAATGAAGTTGATATTGATGTGTCATGGCTGTCACCGCAAAGTGAATATCGGCCGACTGAATATTTACAGCATTGGGTCTCTTTCTGGTTTAAAGAAGAAAA # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //