Array 1 34517-34037 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAKEN010000021.1 Slackia sp. ZJ119 Scaffold20_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== =============================================================================================================================================== ================== 34516 37 100.0 29 ..................................... AGGCGTTAATAGATACACCTATCGTTCGT 34450 37 100.0 29 ..................................... CTGGATGAACTCGGGTACGGCCTGGCGTG 34384 37 100.0 29 ..................................... TTCGGCGTCGATCCAGTCGTCGGCGTGCC 34318 37 97.3 28 T.................................... GAAAAAACGGAGGCTACGCCTGGTGCAA 34253 37 97.3 143 ..............................A...... TGCGGAGGCGTGAAAAAAGCGCCTGCGTTGGCGCTTGATTCCCGAAAACATGCTATACTCTGCTTGCGGAGACACCCCCCCGTCTGTCAAAGAAGGGCAATGGGAATCTCCGTTCTTCTGTATGTCTCTATCTCCGTCTCCGA 34073 37 94.6 0 ..........................A....C..... | ========== ====== ====== ====== ===================================== =============================================================================================================================================== ================== 6 37 98.2 52 GGTTTTGGAGCAGTGACATTCTGACTGGTAGTCAAAC # Left flank : GGTTCGCCGGGAAGCTTCAGAGGAAGTTGTGCGATTTGCTTTTAGAGGACGAGGGGTTGCGCAGCGAATTGGAACTGTTGAGCGAGACGGCGCGAAGCAGAATCCATGGACTGAGTTTGCAGCTTGAAGGAAGCCACTCGTTTGCGGTAGAGTGGGATATGGCGAAATACGTGAAGGCGTTTGGTTTTGGCGTTGATGTTTCGCAGGGCAAAACGCTCCTTGACAGTTTGATACTGTTTATCGACTGCATTTCCGATCTTCGGTTCGAGGAAGCCTTGCTGTTCGTGAATTTAAGAGCTTTTTTGTCAACTTTTGAACTTCAAGAGTTCTATGATCGCGTCTTTTATCATGAAATTCCGGTCCTTCTGCTTGATAACGCAGTTTTTGTCCGTGATGATGGATACGAGAATGATCTTGTCGTTGACCAGCACTTTCTTGAATCGGGAAGATCGTGCCGGTTGGAATGTTCGTCCTCTTCGCAGAGAGGAATTTGCTCCAAC # Right flank : GCTTGCAACAAAACGACCCCGGCGCAGTGCCGGAGCCGTAAAACAGGGGTCGTTCGAGCCTTCGGCCTATGGCCGGCCAAGACGGCTTGGGTGGTCAGAGCAAGCCGTTGCGGCTGGTCGGGCCGGTAAATGCGGTCCGAGCGGCCTGGATGGACAAGGCGGCGCCCGCACTGGTTCGAGCCGGCTATTCCGTTTCTTTCAAAAACTCCTTCTCGCTTTTGTTGTCTTCGCGGACGGCTTCTTTCACGTCGCGCTTGAACTCGCGAAACTCTTCGCGGGCTTCGTGAATGTTCTCCTTGGCGTTCTCAACCAGGTCTTCTTTGATGGCCTTTGCCGTTTCGATGGCGTCCTTGCCCAATTCCTTGCGCTCTTTTTTGTCCTCGCGGTACAGTTCGCGGTCTTGCTTGTCCAGCATGGCGAGCTCCTTTCGTGTGGCGAACATCGATGTGCGCCGGCTCGGTTTTGCGCCGACGACAACCAGCATAAAAGGTGCCGCGCCC # Questionable array : NO Score: 3.79 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:-2.37, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGTTTTGGAGCAGTGACATTCTGACTGGTAGTCAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:54.05%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.10,-2.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [36.7-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.05 Confidence: HIGH] # Array family : NA // Array 1 178417-176501 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAKEN010000002.1 Slackia sp. ZJ119 Scaffold2_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ===================================== ================== 178416 33 100.0 36 ................................. CACGTCGTAGTGATGAAATTCTTTACGGCATTGAAA 178347 33 100.0 35 ................................. AAGGTACTCGCGCAAATCGTCTGGTCTTATTTTTA 178279 33 100.0 35 ................................. TCGCGCATCATGCGTTGCAGCGGTGCCTTGATCTC 178211 33 100.0 34 ................................. AGCTTCGTCCTTCTCTGGCCGGTCTGCCGGTCGG 178144 33 100.0 33 ................................. AAACTGTCGCACGCGAGCCCGCGGCTCTTCGCG 178078 33 100.0 35 ................................. GCCAAGGGCGTGTACGAGCGGTCCTATCCATGCGG 178010 33 100.0 35 ................................. AAGCTTATAGCGTGAAAGCATGATCAATGCTTGCT 177942 33 100.0 37 ................................. GACCTTGCAAAAGGTGCGCCAGGAGTTGCGCAGGTTG 177872 33 100.0 34 ................................. GAGCTTCTGGAGGCTGGCCGATGACCCCGCAGGA 177805 33 100.0 34 ................................. CACGCGATGATTGCCGCCTTTATTGCGCTGATCG 177738 33 100.0 33 ................................. GGGGAACTGCAAAACTACAGCCCGGAGTGGGAC 177672 33 100.0 33 ................................. ACCGTTGAAAATCGGCTCGTAACACTCAAAGCC 177606 33 100.0 34 ................................. TATTGCTGTAACGTAAGGCAAATCATCTGACGAT 177539 33 100.0 35 ................................. CACCTTTACAGCTTTGAAATGTTTTTGCACGAGGA 177471 33 100.0 35 ................................. TGCTCAGCTTGATATTGTCGCCGGTAGTCTCCACC 177403 33 100.0 34 ................................. TTGGTCACGTCATCCCACGGCACAAAGCCGGTTC 177336 33 100.0 33 ................................. GGTTTGCATCAAAGCATCGTATGCGCTACCAAA 177270 33 100.0 34 ................................. TTGTATTTCGCCGTCCCTCGCCCGGTGCTCCTTG 177203 33 100.0 32 ................................. CAAGCGGCGTATTCCTCCGGCGTCATGTTTTC 177138 33 100.0 34 ................................. AGCGGATCTACCGTAGCCGAAATCGTCAGGGCTG 177071 33 100.0 34 ................................. TATCCTGAAGCGACGTCACAAGCCCCGCAGGCGC 177004 33 100.0 35 ................................. GGCGTTAGGGTTACGCTTTCCGGTTTCCCATTGCT 176936 33 100.0 34 ................................. TCGTCTGCGTAGTACCATACGCATAAAGATGAAA 176869 33 100.0 35 ................................. GAGTCGACGTGCGGAAGCGACGTCGGCGGCTGCAG 176801 33 100.0 33 ................................. CCGTTTCGGGCCGGACGTTCAAGGGCCATTTGA 176735 33 100.0 35 ................................. CGACGTTTCCGACCTCGCACGAAAAGCTTGCGTCT 176667 33 100.0 33 ................................. TACATCGACGCGGTGGAAGGCATCGACGACGCA 176601 33 100.0 34 ................................. GACGCATCGAGTGTCACGGACATGTCGTGCATGG 176534 33 72.7 0 .C..G...G.....T....AT.C..A.C..... | A [176529] ========== ====== ====== ====== ================================= ===================================== ================== 29 33 99.1 34 GTCGCTCCCCGCAAGGGGAGCGTGGGTTGAAAC # Left flank : ACGATGTGAATACCGAGGATGCCGCCGGTCGGAAGCGTCTGAGAAAAGTCGCAAAACACTGCGTCAACTATGGTCAGCGCGTGCAAAATTCCGTATTCGAATGCGTGGCCGACGCGGCGACGATGGCGCACATCAGGGAAGAACTTTTGGGCCTGATAGATCCCGAGAAAGATAGCTTGCGGCTTTATTCGATGGGGAACAATTACCAGGGTAAGATCGAACATATTGGCGCAAAAGCAAGCTATGAGGCCGAGGGATTTATTTCGTTCTGAGGGGGGCGTCGGGCTGCACGAGGCCGAGGGGGCTGGCCGGCGCTTTCTTGGAAATTGCGGGCCAGGCTCTGCGAAGGCGAGCGCGAACGGGAGGCGTTCATGATTGCCCTTGTCGGTTCGCACTCGTTTTCTGCGCTTTGAACCTTGACAAAGCGGCTCTTGCGGCAGGTTGTTCTGCTTTAAAGTCTTATATGGTAGGATTATGTGTGCAAGACACAAGGTCTTGCG # Right flank : GAAGGCATCTGTGTGCACTGGGAGCACACAAGCGTCTTTCCTGCGGAAAGACGTGGGTTGAAGTGGCTTTGGCTGCGTTTGCGCTTCGGGGAAACGATGGAGAAATCGCTATGGAAATCCTTGTGGATCTGTTTGGTTCTGGTGCTCCGAACTGCAATGAGTTTTACTCGTTTTCAGGCTCTTCTCCGGTTCGGCTTTTCGTCCCTGCCTGCCGCCCCCCGCTGCCCTTCGACCTCTTCTGCTCCCCCTGCTGTTCTAGCGGCGCCGCCGCGTCTACCGCCGCCGAGTGGGTTGGGACGGCCTTTTCCTTCCGCAGACGGCGGCGGCCGGGCAAGTTGCGCTACCATGACCCTACGAACTGCGAAGACGGAGGACTCATGGCGAAGAAACTGCTGATGGGAAACGAGGCGTTTGCGCATGCGGCGCTTGAGGCCGGCGTGCGCGTGGTGGCGGGCTACCCCGGAACGCCCTCTTCGGAACTGGTGGAGACGGTTGCCGCC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCCGCAAGGGGAGCGTGGGTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-9.10,-9.30] Score: 0/0.37 # Array degeneracy analysis prediction: R [10-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [43.3-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.05 Confidence: HIGH] # Array family : NA //