Array 1 2145320-2143655 **** Predicted by CRISPRDetect 2.4 *** >NZ_BPWA01000001.1 Rodentibacter sp. JRC1 sequence1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 2145319 37 100.0 34 ..................................... TTTTCCTTTTCGGCTAATCCTTGCATTTTACTTG 2145248 37 100.0 36 ..................................... GCTAACAGCATCCGCTGATGAAGTGATAACACCAAA 2145175 37 100.0 35 ..................................... TCATTCGTTTCTTGTTCGAAGAACTTTTCTTGTTC 2145103 37 100.0 34 ..................................... GTCAATAGTACTAGCGATACCGCTAGTAGTCGAA 2145032 37 100.0 35 ..................................... TTCCTTAACAGACATTAAGTTTTTAGCTTGGATTT 2144960 37 100.0 33 ..................................... TTGTAAAGTTTTAGTTTACAACTCAATTTTGTA 2144890 37 100.0 35 ..................................... TACTTCTTTTGTCAAGCTCTAAGAGGTATTCTTCC 2144818 37 100.0 37 ..................................... ATAAGATTTTCCTCTTTATTGGTTGATGAATAATTTA 2144744 37 100.0 32 ..................................... GTCAATTTGTTAAGGAATTTCATTCCTTCAAA 2144675 37 100.0 33 ..................................... GGTATAGCTCAATCTCCTTATCTAATTCAATGC 2144605 37 100.0 32 ..................................... TTAGTACCCCAGCTTGTTAGACCACTTACTGC 2144536 37 100.0 35 ..................................... TAGTATCTGCTGTTAATGTGATAGTACCAAATGCT 2144464 37 100.0 34 ..................................... AGAATGGAATGATTTAGCTAAAGACACTTTGAAC 2144393 37 100.0 32 ..................................... ATAGTTTCTTTGTTATATTCTGATTGATTAAA 2144324 37 100.0 32 ..................................... ATAGTTTCTTTGTTATATTCTGATTGATTAAA 2144255 37 100.0 32 ..................................... ATAGTTTCTTTGTTATATTCTGATTGATTAAA 2144186 37 100.0 35 ..................................... TTCTACGTTCTTTCTCTTTGTGTTGTTCAACCACT 2144114 37 100.0 33 ..................................... TAAGAGTTTTCCTCGGATTAATTTGATAAATCT 2144044 37 100.0 33 ..................................... TAAGAGTTTTCCTCGGATTAATTTGATAAATCT 2143974 37 100.0 34 ..................................... CATTGTTAAAATCTATAATTGCGATTTGTAAAAA 2143903 37 100.0 35 ..................................... TCCAGCGAGTTCTATGTTTATTGATTGCCTCTGTA 2143831 37 100.0 33 ..................................... ATTGCTGAGTAATTGGGTTTCTCGCACTGCATT 2143761 37 97.3 33 ....................................C TCCGTAAAACTTAACAATGCTTTTGCGTGTTGG 2143691 37 86.5 0 ..............................CAA.T.A | ========== ====== ====== ====== ===================================== ===================================== ================== 24 37 99.3 34 GTCGAAAGACATTGCCCTGTTCTAAAGGGATTGAGAT # Left flank : GGAAGAATGTATCTCATCGGTTATGATATTGCCAATCCTAAACGACTCGCAAAAGTGTATAAAGTAATGTTACATTATGCGACACCTATTCAATACAGTGTCTTTTTATTTGAAGGCAGTGAAAAAATGCTAGAAAGCTGTGTTGAAGAAATCCTGAATCTTATCAATAAAAAAGAAGATGACTTCCGCCTATATCAGCTCCCACCAAACGGCAAACAATGGCGACTAGGAAAATCTTTTTTGCCCGAGGGGATTTTTCTGACAGGAATGCCAATGGGGATTTATTGATTTGCCAAAAAGAGTATAGATGTAATCGCTTGTGAGATATTGGCTTTTACAAGCGGTTAAATTTGAGTACAATACACAATGTCTTTTTATGGCGGAAATAATTAAATTGATTTAAAAATGTACAAATTAAACCTTAACTCTTTAACTTCTCTAAAAAGTTGGAAAGCCACCTTACAAGCGCTTGATATTAAAGCATTTTTATCACTACCGCG # Right flank : ATCATTTTCTACAATAAAAATACAAACTTGTATTTCTTCAACGTTATTGAAAAATCTTTTATACTTCAGACATTATTTGAACTAATTAAGGAAAAATTATGAGTCATCTCTTATCTTCTTCCTGCCGAATGGCATTTGCAGCACTAATACACGATATTGGCAAACTTGCTCAGCGAGCGAAGTTACCCGTCCCAATGGAAACTCTAGATGCCCATAAAACCCTTTATTGCCCTTATAATCAGGAAAAGAAATACCATTCTCACGTTCACGCAGCTTATACTGGCATTGCACTTGACCAGATTGAGCCTTATGCCCCTAATTTTATTAGTCAACATACTTATCCGTTTATTGCCCGTCAGCAGGAAAGTACGGATATCACGGATTCGCTGATCAACGCAGCAGCCTCTCATCACAAACCCGATACATTATTACAATGGATTATTGCAACAGCGGATCGCATTGCTTCAGGTTTTGAACGAGAAAAATTTGAAGAATATAAT # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGAAAGACATTGCCCTGTTCTAAAGGGATTGAGAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.76%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.30,-5.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [80.0-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.78 Confidence: MEDIUM] # Array family : NA // Array 2 2179934-2181797 **** Predicted by CRISPRDetect 2.4 *** >NZ_BPWA01000001.1 Rodentibacter sp. JRC1 sequence1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ===================================== ================== 2179934 31 100.0 35 ............................... CTGTGTATGTGCCGCTAAGGTTTCAAAGGCTTTAA 2180000 31 100.0 34 ............................... AAGGTGGCGACAATGCTTGGCTAGTTAAAAAATA 2180065 31 100.0 34 ............................... ACCGCCCGGATCACGTGGGTCATTGACATAACCG 2180130 31 100.0 35 ............................... CACGAGTTATAGTGGCAAATATGAGGATAATTTAG 2180196 31 100.0 37 ............................... CTGCAACTTTTCTTAAAAAGAAAATCGCCAATGTTCA 2180264 31 100.0 35 ............................... ACCCCAAAGGGCTGACAAAGGGTTTGTGCAATTTG 2180330 31 100.0 34 ............................... TACGGATTGTCGTCCTGCAAATTGTGCAGCGGTT 2180395 31 100.0 35 ............................... TTCCCCAAAGGCAACATAATCCAATCTTGCTCCGG 2180461 31 100.0 34 ............................... ACCGGCAAGGGCAAAGCCATCAATATTTTTGGCA 2180526 31 100.0 34 ............................... ACCGCCCGGATCACGTGGGTCATTGACATAACCG 2180591 31 100.0 34 ............................... AGGAAAAGCAAAAGACAATCAGCAACAACTGAAT 2180656 31 100.0 36 ............................... CCCTACTTATCGGGCGTGAGTTTCGCCACGGCACAA 2180723 31 100.0 34 ............................... CTTATCAATTGGTATTACAAGAAAAAAGATTTTG 2180788 31 100.0 34 ............................... AATGCCGCGCGATTCCAATTCGGCTTTGAGTTGT 2180853 31 100.0 35 ............................... CCCACGCTTGGGATATACCAAGGACTGCGATAGCA 2180919 31 100.0 33 ............................... CTGATAGTGTAATTAGTTCTATTTTCGATTTTG 2180983 31 96.8 34 ............T.................. CACACCGGCTGCAATTGCAAGCTTGATTAATGAC 2181048 31 100.0 33 ............................... CGGCTCTTGTTCCCAATCAAACTCAAAGCCGTT 2181112 31 100.0 35 ............................... AAAGGCATTCAAAAATAACCTTAAAGCGGGTGGTT 2181178 31 100.0 34 ............................... ACAATCTATAGGGGCTTTATTGCTAATTAGTTTT 2181243 31 100.0 34 ............................... ATTTCGTCCTCCTTAAAAGGGCTTTTAATCGCAG 2181308 31 100.0 36 ............................... AAGCAAATAACCGTGCCCGTTTAACGGCAAACGCAA 2181375 31 100.0 34 ............................... AAATCAAACTTTGCTAAAAAACTAGGCATCTCAA 2181440 31 100.0 34 ............................... ACGTAAAGTCATCGCATTGTAAGCATTGTCCTTT 2181505 31 100.0 34 ............................... ATCTCATTTGACAACTCTCGCCCCTAGATGAAAG 2181570 31 100.0 36 ............................... ACATTTAGAAAGTGCGGTCAAATTCAATCCGCTTTC 2181637 31 100.0 34 ............................... CCTTAACCAGGATAGGGCTAATGACCCAAAGAAG 2181702 31 96.8 34 ..........T.................... ACCAATGGTTATTGCGTTGGTTTAACCCTAATCC 2181767 31 100.0 0 ............................... | ========== ====== ====== ====== =============================== ===================================== ================== 29 31 99.8 34 GCAGCTGCTTCACGCAGCTGTGAGTTGAAAC # Left flank : TTAGGGAATAGTTAGACATGCTGATGTTAATTACCTACGATATTTCATTTGATGACCCGGAAGGACAAAAGCGTTTACGTCAAATCGCCAAGCATTGTTTAGATTATGGTGTACGGGCTCAATATTCAGTGTTTGAGTGCGATGTGACACCAGATCAATGGGTTAAGCTAAAAAATAAATTACTGGCAACTTATAACCCGGATTGCGATAGTTTACGCCTTTATCATTTGGGAAGTAAATGGCGTAATAAAGTGGAACATCACGGTGCAAAACCTGCTGTTGATATTTTTAAAGATATATTGATTCTATAGATCGCTAACCTATAGTTCTTATTAAAATAGAGTGGGATTAGCGAATCGAAAAAGTTCTTTAACAATCAGTCAATTAGAAAGATAGCACAATGATTCTGGCGAATCTGCTATACTTTTTTTACTCCCTATAAGCTGTTAGCGAATAACAGGTAATAAAGTTTGATATTTCAATATGTTATCTTATAGGGA # Right flank : CTTAATCAATGAAATAGAACTTACTGGATAATTAGTATCTATGAACCAATAAGAAAATCCACCTTTAATCAGTTAATAATATTTAACCTTTGAGGGTGGATTTTCTTTAGTATTTATTATCGTTGAATTAAATAACGTAATTTTGTTCCGTCTTGTTCAACGCTTAATAAGGTGTAGCCATGGTTTTTTGTATCTACCGGTATATTATTGATAGATTGTGCGCAATCGCTCAATAATTCCAAGACTTCGCCTTTTTGAAGTTGCGGCATGGTTTCTAACATCACGATTGCCGGATAAGGGCAAGGTTCACCAAGGGTGTCTAAGGTGTAATCCGGTGTAATATCTTTCGGATCTTTATCTAGTTTTTGTACAACAGTAAATGCCATATTAAGTCCTCTTTATTTATGAAGAATAAGTTACGCGCCACAGCAATTTTGTGCGGCAACTTTCGCTTTTGCTTTCGCAAGGAAACGACGTTCCCACCATACAACGGCAATTAG # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCAGCTGCTTCACGCAGCTGTGAGTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [7,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.70,-3.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA //