Array 1 391-26 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABTTI010000001.1 Turicibacter sp. PIG517 Pig_turic_patric_spades_2_20_20_contig_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 390 36 77.8 30 TAC.A...A.CAA....................... TCTAATGCGGCAAACTGTCCGAGATAATGG 324 36 100.0 30 .................................... AAATTGTAAATATTTTGTTTTTGGATGAAA 258 36 100.0 29 .................................... CATAAAGATAGCGGTGCTTAGGCATCCAA 193 36 100.0 30 .................................... GTGATAACATCAATCACTTTATAACCTTCA 127 36 100.0 30 .................................... AAATTGTAAATATTTTGTTTTTGGATGAAA 61 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 6 36 96.3 30 GTTTTACAGTAGCTAAAATCTTAAGGGTACTAAAAC # Left flank : AAGATATATTGAATTGAAAAACAAGCTGTCATCATCACACAAATTAATGCCACCATCGTAATCCCACGACCTATCCCACCAATGATCGGAAATCGATTATTAAACCATCCATAAATATTTTGCGTCAATAATCCAACAAATGCAAATGCTAAATAAATTCCCACATGAAGAAGTGCCATTTGCACAAAAAAAGGAATCGTCGTAAATAAAGTTGCACCATTTGCCACCACTAAAGCAACCATCGCAACCATCATATTAAAGAAAACAAACTCTGCAGGCTTATAATATGGACGAAACACCTTAAATAAAAAACCGATCATAAAAAATAACATTGGAAAAATCACTAATCCTAACATAAATCCTCATCCCCCATAAAATCAATAAACTTTATTCCATCATATCATAACACCATTCAAAATAAAAGGGCTACCAAAAAAGGTAACCCGTTAACTAATTGTTATAAAATATAAAATTGTGGATAAGTAAAACTATTAATATTC # Right flank : CCATAAAGATAGCGGTGCTTAGGCAT # Questionable array : NO Score: 2.87 # Score Detail : 1:0, 2:0, 3:0, 4:0.81, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTACAGTAGCTAAAATCTTAAGGGTACTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-3.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [23.3-80.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,0.64 Confidence: LOW] # Array family : NA // Array 1 18444-17883 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABTTI010000034.1 Turicibacter sp. PIG517 Pig_turic_patric_spades_2_20_20_contig_34, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 18443 36 100.0 30 .................................... GTGATAACATCAATCACTTTATAACCTTCA 18377 36 100.0 30 .................................... CCAATAGTTGTTTTTATTTGAAAATTTGTA 18311 36 100.0 30 .................................... TAACTTACTATGACAAAGATAACGACACAT 18245 36 100.0 29 .................................... AACGGGCAGAAAGAGGTTAAGGAAATGGC 18180 36 100.0 30 .................................... CGATGAAATAATTCTCTAACTTCTGATAAC 18114 36 100.0 30 .................................... CGATGAAATAATTCTCTAACTTCTGATAAC 18048 36 100.0 29 .................................... AAGGATGCTGTAGACGCAATCAACCACAA 17983 36 100.0 29 .................................... AGCGACTTTGATATTAATGAATTGATTAA 17918 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 9 36 100.0 30 GTTTTACAGTAGCTAAAATCTTAAGGGTACTAAAAC # Left flank : AAGATAGCGGTGCTTAGGCATCCA # Right flank : CTCAAATGATGATTTAAGATTTTAATACTTAATTAAAGTATAACTGAGTACTTATAATTTATAAAGTTTTTCTTCTAAAAAATTCCATTCAAGTCTTGATAATTTAGGAGTATATCGCTGCTGATAATTATGAAAATAAAATCCTTCATTCAATAATACGAACAGTACTAAACTTTGATCATAGGGTATATAACTTTGTCCATCCTGGCTTAACAGATACGGAATAATTCTTTTGAAATAAGACAGTAATTTTTCATCTTCAATATCAAAAGAACATGGATAATTACACTGAAGATAATTATGAATACTAATCCAATCATAAAAAGGCTGACACTCTGAATCACCACAAATTAAAATTGTTTCTAATAAATCTTTTTTAATAAGTAAATCACTACTAGTAGAACCAAAGCTAATTATAGTCAACTGCCCCTTTCTACTTAATTGATGCAAATCATTTAATAATAACTCCACTTTCTCTATCGGCACTAATTTTGATAAAT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTACAGTAGCTAAAATCTTAAGGGTACTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-3.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [81.7-21.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.37 Confidence: LOW] # Array family : NA //