Array 1 1474048-1475999 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP040751.1 Desulfovibrio sp. IOR2 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 1474048 32 100.0 33 ................................ ATTCGTGATCCTGAGGCAGATGGAGAGGTAGGT 1474113 32 100.0 34 ................................ CAGGTCCGGTCAAGTGGTAATCTCGGACTGCATT 1474179 32 100.0 34 ................................ AAGGCCAACCCCGGCAGCGCGCCAACCCCGCTTT 1474245 32 100.0 34 ................................ ACCTGATTTTGAGACATCAGAAAATCTTGGAAAG 1474311 32 100.0 35 ................................ ACGAGGTCATCGACCGCAAGGGCTGTTTTGAAAAG 1474378 32 100.0 35 ................................ TTGGTGGTCTACGCCTCCACACCGAACGAAGCCGC 1474445 32 100.0 35 ................................ ACGATGATGTAATACGCGGCTCCGCGCTGGCCTAT 1474512 32 100.0 35 ................................ CCGCTACTTAATGAGGAGACGCCCTTCACGCCCAG 1474579 32 100.0 34 ................................ GTGAACCCGGAAACCGGCACCCGCTATACATGGG 1474645 32 100.0 34 ................................ CGGTTGGCTTTTGCGAGTTGTGCGACACTCCTCT 1474711 32 100.0 34 ................................ TCAGCTTAAGGGAGTCCTCTATGCAATTGGTAAG 1474777 32 100.0 35 ................................ CTTCGGTGAGGACGTTGGCGGGCAGCTTATCACGC 1474844 32 100.0 33 ................................ CGTATCGATCCTCCAGCATCGTCCGGTACTGCT 1474909 32 100.0 34 ................................ GAGCAAGCTGCCAATGCTTGGTCTGGGCTTTGGT 1474975 32 100.0 35 ................................ CAAGTAACTACAGTTCACACAAAGCAGAGTGAGGG 1475042 32 100.0 33 ................................ CTCTCCGCGACACGCCGCCAGGCGGACGTCTTC 1475107 32 100.0 34 ................................ CATACAGGGAGATGAAGGGCAAGACGGTATCAAC 1475173 32 100.0 34 ................................ TGGGTGCGCTGTCCTTCCTGCGGCACCTATCATG 1475239 32 100.0 34 ................................ TTGCGCTTCTTGGTGGAGCCGCCGCCGGTTGTAC 1475305 32 100.0 36 ................................ CTTACCCAGTTTGCGCTGTTGTCGTCCTATCCGCAG 1475373 32 100.0 34 ................................ AAGGTCTACTTTAAGCAGGAATACGAGCTTGAAA 1475439 32 100.0 35 ................................ GCGTAAAGCCATGAGAAAGGTCTTTTGCTGGTCTC 1475506 32 100.0 34 ................................ TGGACAAAGCGGGCATGCGCACTCTTGGAGAGAT 1475572 32 100.0 35 ................................ AGCCGCGACAGGATGGGAGAATGAGTCTTTCGGCA 1475639 32 100.0 36 ................................ TGGCGGCTCCTTAGAGCGGAGGCCAGCTAAGCCCAA 1475707 32 100.0 34 ................................ CAAGAATGAAGCCATCAAACTCCTGACAGAGGAT 1475773 32 100.0 33 ................................ AAGCCCCAGATGGACGATCGGGGTAATGAAAAG 1475838 32 100.0 31 ................................ GTGACACCCAAGGCCGTTGCAGACGCAAAAG 1475901 32 100.0 35 ................................ ATTCGAGGTCAAAGAACGCGCTGGACGTGTTGGGC 1475968 32 93.8 0 ..........T....A................ | ========== ====== ====== ====== ================================ ==================================== ================== 30 32 99.8 34 GTCGCGCTCCCTGCGGGCGCGTGGTTTGAAAC # Left flank : GGAGATCAAACTTAGTGGTGAAAGGGAGGAATGCTCACGAGGTTACGCAATTGCTGGATTGGATTTCAACGGTGAGTTCAAGGAAGTGCAGCGGCGGTTTCGTATCATTGATTCGGATACCAGGATGGTGGTGATCGATCGTCCCACGGTCGAGTCATTGCAGCAGGGCCGTCATGTTTCAAAGTCCACGCTTCAGGATGTCTCGGTTCAGATTTGGTCGAATCAAATTGAAAAGCTCCCTGTTCAGGACGTTGATGGGTATCCGGATCTGTATGTTTGGAACGGAGCTTACGATGAATTCCTTGGCTACCTTGCCGAGTGATGCGCGAACCTAGAGTGGGCATGGAATCGTCGGGTGGTTCGCGACAGAAAAAAGTTCATTGAAAATAGAAGAGTGGTGAGTTTGTAAGATATATGACCGCGTTGAATAGCTGGCAGAATAAGAGGTTCGCGGATGTATGTCGTTGCATCCTTGTCAACCGGGCTATCTTAAAGTGGCA # Right flank : CCAATACAGTATGGAAGTGTTGATTGATCCCTCTTCTTGTTATGCGAGAAGAGGGATCACCTTCCCGTTGAGTGTTTTATTGTCTGGTGAGGTGAAGCGAACGATTTGGGCGGCAGTTCTGCCGCCCTTTTATTTTGTGTACTTGGATTTTTTCAAGTGACTCAGGTCGATGTCGAAATTCACCTTCAGCATCAGTTCTTCGTACCGGATGCGTTCGCTGTACTCGTTGGCGTAGTAGTCTCCTGACATCGACTGTTGCCTCATTCCCAATGCGCTGGCGTGTCCGACCGTTTCCTCAATCATGGAGATTTCCACCCGGGCCTGTTTGGCGGCATCAATGAAGGTGTTTCTGAAGCTGTGGAAGTCTTTTTTGAATCCGGACCTCGGAGGTTGCAAATCGAGGTTTTTTTTGAATCTGTCGTTGAACCACTGAGAGACTACCTTTCCATACTTTCCCTGCCGTGGCTTGATCTCCGGGAAGACGCGGTCATTCCCTGCCC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCTCCCTGCGGGCGCGTGGTTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCGCCCCGTGCGGGCGCGTGGGTTGAAAC with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-6.00,-5.80] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [51.7-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //