Array 1 517-19 **** Predicted by CRISPRDetect 2.4 *** >NZ_NEKB01000035.1 Alloscardovia macacae strain UMA81211 NODE_35_length_581_cov_83.7471, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 516 36 100.0 30 .................................... CTATCTTCCCACTATCGTAGAGGAATTCGT 450 36 100.0 30 .................................... TAGGTGCGAAAGGCAACATCGAGGAAACCG 384 36 100.0 30 .................................... ACACCGCGAAGGGCGTTTTCACGCAGTTAC 318 36 100.0 30 .................................... CGTCTACTCATACACCTTTTTTATTCGTCG 252 36 100.0 30 .................................... TTCGTGACCGTGCGGTGCGACTGGACCAAG 186 36 100.0 30 .................................... CTCAACCTGTTACCGCTCGAGAGTTTTACA 120 36 100.0 30 .................................... AAACACGTTACTAATTTAAGCCACCCCTTT 54 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 8 36 100.0 30 GTTTCGGATGTCTGACGGATCAATGAGGTAGACCAC # Left flank : GCTGGTACATTGACGAAGACTTTGTTCAATTCTAATGAATTGTTCATGAAACGTTAAGGCTATC # Right flank : CGCGTGTGGTATGTGGGTG # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCGGATGTCTGACGGATCAATGAGGTAGACCAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [9,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.80] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [11.7-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.27 Confidence: MEDIUM] # Array family : NA // Array 1 51899-52528 **** Predicted by CRISPRDetect 2.4 *** >NZ_NEKB01000013.1 Alloscardovia macacae strain UMA81211 NODE_13_length_52546_cov_129.074, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 51899 36 100.0 30 .................................... ACGCAAACGCTTAGGCGCCTTACGAACACG 51965 36 100.0 30 .................................... AACAATGGATAGCGGAAACGCTCACAGCCA 52031 36 100.0 30 .................................... AAAACGATTCGCGGGGCGAGCGTACCAGAC 52097 36 100.0 30 .................................... CCGGTAAAGCTCCGTGTTCCTCATGCCCTC 52163 36 100.0 30 .................................... CCACGTCTGGCATCCAGGCTACCGCGTTTA 52229 36 100.0 30 .................................... ACACAACACAATAGCGTTCGAACCATTTGT 52295 36 100.0 30 .................................... GCGGGTTGGATTGAAGCGTTTCAGTCTACT 52361 36 100.0 30 .................................... GTCAACAAGATAATAGTGGAAACTCTCACG 52427 36 100.0 30 .................................... CTTAAGAACCTTATCACTTACATAACGCGT 52493 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 10 36 100.0 31 GTTTCGGATGTCTGACGGATCAATGAGGTAGACCAC # Left flank : GAGAGTACAGCTTTTCTGACTGGTTCATGAAGACAGCTCTGACAAAAATGCTGCTGAACTTTGATAGCGAACAGCTTAAGATACTGCATGATGCTTTCGAAATGGGGTACTCAGTCTTCGATGCTATAGCGCTGGATAGGATGCTGCCAGTGACGGTATCGGGGGAATTCGATCCAAAAGCAATGCTTGGGATATATAAGCCGAACATCGCCGTGCCGAATCCAGAAAACTTCTATGATGTACTACAGGCAGTGATAGACACTGCAGGAGCTCTGAACGAAAAACGGATGCTCGTGATGGTACATATAACTGAATATAGTACACAGGAGCAATTAGAATACCTTAGTAAAGACATTAAGAGGCAAAATCTACAGGTTCTATCTCTCGAACGGACTGACCATCTGTTCCGATTCGGCGAATCAGGCATAGGAAGAAGCTGGTACATTGACGAAGACTTTGTTCAATTCTCATGAATTGTTCAGGAAACGTTAAGGCTATCC # Right flank : GCGTGTGGTATGTGGGTG # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCGGATGTCTGACGGATCAATGAGGTAGACCAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [9,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.80,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [63.3-11.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.27,0 Confidence: MEDIUM] # Array family : NA //