Array 1 129025-126375 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHYXC010000005.1 Klebsiella pneumoniae strain P26 NODE_5_length_377885_cov_18.828776, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 129024 29 100.0 32 ............................. GAGCAGGCACCCGCCGCAACGACGAAGAGCGC 128963 29 100.0 32 ............................. AAATCAGCCAGCACCACGATTCTGGGAAATTT 128902 29 100.0 32 ............................. ACAGGCTTACCCGTATTGAGACGGTTGCTGAA 128841 29 100.0 33 ............................. GAAACCCCATCAGATGACCCTCCCCATGTTGGC 128779 29 100.0 32 ............................. TTGCCTGGTCTGCTTGGTGATGATCCGTGGTA 128718 29 100.0 32 ............................. TACAGAACGACTGAGGCGGCGTGTATTGCATA 128657 29 100.0 32 ............................. GATCTTAACTCTATTGCCAATGGCGCAATTCA 128596 29 100.0 32 ............................. GGCGATGCGCGCTCTGCTGGCTATCGGTAAAA 128535 29 100.0 32 ............................. AATGCAGCAACCGGCAAATATATCGCCGGTAA 128474 29 100.0 32 ............................. GGGCTGCCGCACGCCTGGGACGAGTCGAGCCC 128413 29 100.0 32 ............................. CCGCAATAACAAAAATAAATGAGGGTTAAAGT 128352 29 100.0 32 ............................. GTAAATGGGAATGAGTAGAAGAGCGTCATTGG 128291 29 100.0 32 ............................. CCCCCGCGCACATGCTTAAACGCGCTATCACG 128230 29 100.0 32 ............................. GGCATCTGTTGTGTAATGTTGAGTTTTTTTCA 128169 29 100.0 32 ............................. CAGGTTAAACATGTAAAAAATGACCGTCGCCG 128108 29 100.0 32 ............................. CACATTGCCCGGTCTGAAAAGTATTTGAAAAT 128047 29 100.0 32 ............................. TCCGCACAGTCAAACGCTCCAGACACCAACCC 127986 29 100.0 32 ............................. CCGGAACACCACCAGTAACAGCTACTGTAGGC 127925 29 100.0 32 ............................. TGACCCTGTTGATTTTGTTCCAGGTAATACGT 127864 29 100.0 32 ............................. TTAACCTCGTCGTTCTGGTTTCCGCCCAGGAT 127803 29 100.0 32 ............................. GAACCTGAATTCGAAGGGTGGGTCATCCTTCC 127742 29 100.0 32 ............................. GGACCCCGAGCGACCCGGTCACCCTCCGACCT 127681 29 100.0 32 ............................. CCGTCGAACGGCGGTTATATCCATCTTGAGTC 127620 29 100.0 32 ............................. ACCGATCCCACAATTGCGGCGGTTGAGATTGA 127559 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 127498 29 100.0 32 ............................. CCGATTGTCTGGCGGTCGAGCGCCATTTGCTC 127437 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 127376 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 127315 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 127254 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 127193 29 100.0 32 ............................. CCCTCCGCTTTCAGGGTGTGGCTGATATCACC 127132 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 127071 29 96.6 32 .............A............... TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 127010 29 100.0 32 ............................. ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 126949 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 126888 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 126827 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 126766 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 126705 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 126644 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 126583 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 126522 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 126461 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT 126403 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================= ================== 44 29 99.4 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCCTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : GTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATTC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //