Array 1 37395-36329 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADPKZ010000044.1 Alicyclobacillus mali strain FL 18 k89_128, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================== ================== 37394 37 100.0 34 ..................................... TGACCGACGCGGCGAAGCGTACCGCCAAGGCATG 37323 37 100.0 36 ..................................... ACCGCGCTCATGCAATGGGATCCGGTGCAGGGCATC 37250 37 100.0 36 ..................................... GCTTCGGCCAGAAGATTGTCCAACGCGCGTTGCAGC 37177 37 100.0 36 ..................................... TGCTTCGGAAAACGACTGTTTGTCCGGCACCAAGGA 37104 37 100.0 36 ..................................... CAAAAAACCGCTTCACCAACCAATCAAGCTGGATTG 37031 37 100.0 38 ..................................... TGCGAAGCCTTCTCCCAGTTTTGCAGGAACGCGCCGAA 36956 37 100.0 35 ..................................... GCCGCGTGCTGCTCCACGAAGACCGGAAGGCCCAA 36884 37 97.3 37 ...A................................. AATATTGAGTCGGTGGAGCAGGTACACGCCTAAGTGC 36810 37 100.0 39 ..................................... CTGGAGGCTCGGATCGCTCGTGTTCTCGGAGACCGCGTC 36734 37 100.0 36 ..................................... GTGTAATGATCAACACAGCAATCATCGCCGATTTAC 36661 37 100.0 35 ..................................... TATGTGCGTATGTTTATTTACCAACTGTAATCGAA 36589 37 100.0 35 ..................................... TACCGCACGCCAGCCCGCCTGAGAAGTAGGTACTC 36517 37 100.0 37 ..................................... AGAAGATCCTCGTACTCCTTTCGCGGGATGTCGCGGA 36443 37 100.0 40 ..................................... GACCAAATGGTTTCCGGTGAAGATCCAATCATGGACGAAA 36366 37 91.9 0 C................A...............T... | C [36334] ========== ====== ====== ====== ===================================== ======================================== ================== 15 37 99.3 36 GTTGATCCGCCGAGATCGTCGGCGGCCCCATTGAAGC # Left flank : GCCGTTCGTGGTGAGTTCATTCTCAAGAAAGATCTGTTCCACATGGATGAGCGCACATTGACGCGGGCAGTACGCATAGTGCTGGAGCGCGGAGATAGGAATTTGCCAATCGTCTTCCATGACATACCGTGCCTCGCTTGCATGGAGATTTTCGTGATAGTCGAAGTATGCCCACCCTGTAGCCTGGGCATACCCGAGGTTCCACGAACCTGCAAGCAGCCGCACCGGTACGGACAGTCACGTACACCACAAGTTGTTAGCCAACATCCAGCGGAATCGGACCAACCTATGAGGGAGTTCGAGTCACCTGTGCGCGAACCTGAATCGCTAACCACGAGGCCGGAGGTTCGCGTAACATGAGAAATTCGTATGAGATCTGGACTTTTAAGCAAAACGAGGGTATGATGGTGCTAGTCATTCGACAGGAAATGTCACTTTCATGGACAGGTTCGCGTTTTTCGCCCGAAAGTCCGCGCCAGACGTGGGTCCGAGCGAGAAGA # Right flank : CTGCTGTCCTCTACATGTCTACCGCTGTCTCGCATCATAGAAAAAGCCGCTCCGCATCGGAACGGCCTTTCTGTGCAAACCCATGTTATCGATAGACGTCTCCCCCACCGGTCCGGAACGCCTCTGCCTTCTCGCGCATGCCTTCGGCGATCGCCTCCTCGGGCTCGAGCCCCCGCTCTTGTGCGTACGCGCGTATGTCCTGCGTAATCCGCATGCTGCAGAACTTCGGCCCGCACATGGAGCAGAAGTGCGCGGTCTTCGCGGGCTCCGCCGGCAGCGTCTCGTCGTGAAAGCTCTCGGCCCGGACAGGATCGAGCGCCAGGTGGAATTGGTCGCGCCAGCGAAACTCAAATCGCGCCTTGGAAAGCGCATCGTCCCACTGCTGCGCTCGCGGGTGCCCCTTCGCCACGTCTGCTGCGTGCGCGGCAATCTTGTACGCGATCACGCCCTCCTTCACATCGTCCCGGTTGGGCAGCCCAAGGTGTTCCTTCGGTGTCACA # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGATCCGCCGAGATCGTCGGCGGCCCCATTGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-13.00,-13.10] Score: 0/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [45.0-38.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.41 Confidence: LOW] # Array family : NA // Array 1 34332-37518 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADPKZ010000035.1 Alicyclobacillus mali strain FL 18 k89_127, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================== ================== 34332 37 91.9 37 ...GA.C.............................. GGAACTTCGCCACGGATCATGCCATCAACGCCATGAT 34406 37 100.0 37 ..................................... AAGCGCATCTCGACACGCAGCCACTCGACATCACAGT 34480 37 100.0 38 ..................................... GTCATCATGGTTGGATACGCGGAATTCCTGTCACCAAC 34555 37 100.0 36 ..................................... ACCGTCAACGGCAAGGTGTCTGACCACTACGGGGAG 34628 37 100.0 38 ..................................... CTGTCTACGCGATTGATACCGAGTCGTTCGCTACGTAT 34703 37 100.0 38 ..................................... TGATCCAGCTCGAGGCGAAGGTCGAAAGATACTTGTGC 34778 37 100.0 34 ..................................... AGAGCCTGGAAGCGCTGATGAGACAGGCGGCGGA 34849 37 100.0 35 ..................................... GACCATATCACCGCCGCAAACGTCGCCTGGATGCA 34921 37 100.0 38 ..................................... TCTATTTAGGTCAAAAAGAAAGACCGCGTTCGCGGTCT 34996 37 100.0 37 ..................................... CAGCTCGTGCAAAGAATCCGCGCGAAGGCCGAGAGGG 35070 37 97.3 36 ...................G................. CTGCCAGAGTGCGAATTGTTCCGCATCGGCCAGATT 35143 37 100.0 35 ..................................... ATTACCAGGGGTTTGTGAAACGTAAACAACAACTT 35215 37 100.0 36 ..................................... GCATTTTCGATATCCCGGCTAACTCCGATAGCTTCG 35288 37 97.3 35 .............................A....... GAGCCGTGGTTCGTCGCAGAGTCGGATACTCAACT 35360 37 100.0 36 ..................................... GGTCAACGATCACAAAACGCGGGCGATCGGCTCCGA 35433 37 100.0 36 ..................................... CGTTTGGCGTGATGTTGTACAGGCCAGCACCGTTGC 35506 37 100.0 36 ..................................... ACTTGCACCAGTGGATTTATTGGGGTGGTGGGAAGT 35579 37 100.0 35 ..................................... TTCGTAGGCGACCATGGCGCCGCACCCCCCACGTC 35651 37 100.0 38 ..................................... GTGGAGATCGAACGCCAGGAAGACTTTTCGCTTGCCTC 35726 37 100.0 35 ..................................... CCGCCAAGCGGTGCACCCGCCCATGCGGCACGCGG 35798 37 100.0 35 ..................................... TTTACAACGGATCGTTCGATTGAGCTGTTGAACTG 35870 37 100.0 34 ..................................... GTACCAGATTGACCCGTACCATATTGATTAACCG 35941 37 100.0 36 ..................................... GATCGACCGGGCGCAGAACACGTCGAGCGTGCTGCG 36014 37 100.0 36 ..................................... TCGGATGCGGGAGCACATGCGGCTCGTCCTCTATGC 36087 37 100.0 37 ..................................... CATACAGGGAATAGGACAGGGCGTCCGGGTCGATCCC 36161 37 100.0 35 ..................................... CCGCGAACGCGGTCTTTCTTTTTGGCCGGAATAGA 36233 37 100.0 40 ..................................... TCTGGCGGATCATCCGTGAGGTTTTGGAGAGACCGACGCC 36310 37 100.0 36 ..................................... CTCATCCATCAAGTCCTCGAGAAATACGTCGAGCTC 36383 37 100.0 36 ..................................... CCGTGTGGGCGATGTCCTGCGCAGTAGTTGGTTCGC 36456 37 100.0 36 ..................................... AACACCTTGCGACTGGCGTTCAAGCGCATCGTCAGA 36529 37 100.0 38 ..................................... TCCCTGGTCAGCGGTTTTCGGATCTCTATCCGATGACC 36604 37 100.0 38 ..................................... CACAAGCGCCATGACCTTCAGCGGCTTATCTGGGTAAA 36679 37 100.0 37 ..................................... TTACTGATGCAGTGTTCAACGTGCTATTCCCAGCGGT 36753 37 100.0 36 ..................................... GACGAAATCACTGCCCCCACAAGTGGGGTGAGTGAA 36826 37 100.0 36 ..................................... TCTCGCGGATGTTGCCCCACTGGAACCACGCCGGGA 36899 37 100.0 37 ..................................... GATGCAAACAGGGAGTCGCCCCGATGGCAAATGCCCT 36973 37 100.0 37 ..................................... TCAAGGCGCGTGAATATGAAAGGCAACGCAAGGCGCT 37047 37 100.0 37 ..................................... TCTTGCTGTGATGGCTGGTGCGCTGAATGGAGTGGCT 37121 37 100.0 35 ..................................... AGAACTGCTGCATCGCGTAGTTGTTGACGTTGGGT 37193 37 100.0 36 ..................................... GAGGCTGAAATGTCCGAGGATGAAGACTTCGACGCA 37266 37 100.0 35 ..................................... TCCATTGCATTGAATCGAGCAATGTAGGCTTCTTT 37338 37 100.0 35 ..................................... GTCATCTGCTCGCCCTCGTCATCGTCGTCATCGGT 37410 37 100.0 35 ..................................... GTGGTGACGTCCTCTATATGAGCGGGGCGCAAGTA 37482 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ======================================== ================== 44 37 99.7 36 GCTTCAATGGGGCCGCCGACGATCTCGGCGGATCAAC # Left flank : ACCGACACCAAGTATAAGCTTGGGACGCAGCTCGGGGCCAATCGGCTAGCAGCCGTCGGCATCTCCGTACTCACCGCAGCACCGGCATACGGTGGAAACCGGCTCGCAATCATCGGCGGGCATTATGATAGCCAAGGATTCTCTCTTGCATGGCCTATATGGAGAGAACCAGCAACTTTGTGTTCCATTCGATGGATGCTCGCGCATCCCGACTTACGGACCGGGGGCCTGCGCCCGCTCGGAGTGGAGCAGGTGATGGTGTCGCGGCGCATTCAGTTGGACAAATACTTCAGCTTCACGAGGGCCCAACCGGTGAGTGCTATGGGCAGTTGAGCGGACGCGCTAGGCTTCAAGTCGAGACGAACCCAAAGGCCACCTTCAGACACCGCCATCAGGCGCATCTGCAGGTGGCCTTTGGGTGCCCAACAACTCCTTCAGGACCAGCCAAAAGTCTTCGAAGATCCATGAAATGGGGGAGGAGCGCTGGGAGCGCCCCGACT # Right flank : CGCCATCCCCCCGGAGCCCGCTCCTGGCGCGGTTTCCCCGGCTAAAATCGCGAACCTGCGCGGCGCGTGGCGTTTACACGGCATCCAACCACCTTCATCATACCCTCTCAGCGCCAAAAAATCCAGTCCTGACGCGGAATTTTCGTCTTGCGCGAACCTCCCGGGCTTTCGCCATCGATCCAGGTTCGCGCACCGCTCTCCAGTGCCCCGTACGAACACTCGAATGCCTCAACGCCTTGTTTGTGCAGAATCGACGCAGGATTCCCTGAATTCAGGTCGAAATGCTATTTCCATCGCTTTAGCACCGCGGTTGTGCGGGCCGACTATCGAGAGCCCCTCACCGCCGTCGTGGCCCAGCGGTCGAACTGCCCGAGTGCACGATGCGACCGCGAATGCACAGGCCAACCGCTCTCATGCGTCGCTCGTTGCACCCGAATTTCGTCCATGCAGATTTCCTCGCAGCGCGTTCCGCGGTTCACGCGCCCCGGTGCTCAACATCG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTTCAATGGGGCCGCCGACGATCTCGGCGGATCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-13.00,-13.10] Score: 0/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [40.0-28.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0.41 Confidence: LOW] # Array family : NA // Array 1 85165-84319 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADPKZ010000039.1 Alicyclobacillus mali strain FL 18 k89_134, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================== ========================================== ================== 85164 34 85.3 39 G...G.............GC..T........... GGAAGACCTCGAGCCCCCACTCTTCGCCCGCAAGCCACT C,C [85152,85158] 85089 34 100.0 40 .................................. TAGGTTGGTTAAAGGTAAAACACCCTCCTGGGTAACAGCT 85015 34 100.0 39 .................................. TTGTACTAAGGAGGCTTTCCGATGAGTGTTCTCTTGGCT 84942 34 100.0 42 .................................. GGGACAGGCCGTCGGTGTACGGGGGCTCATCTTCGCACGGCT 84866 34 100.0 39 .................................. GATGATTACGCTCTTAACCCAGAATCGTAAGCAGCGGCT 84793 34 97.1 37 ..............................T... CGCACGAACGCACCGAAGAACCAGGCGCATACTGGCT 84722 34 100.0 41 .................................. GCTCGTATGCCTGGAGCCCTCAGACGGCGACGCTCACGGTG 84647 34 100.0 40 .................................. GCTCGGCGTCAGCTTGGGATCTCAGCCTACAGGGTATATG 84573 34 100.0 39 .................................. GCTCATTGGCCTGATACGGGTCGAGGTTGATCGTAGCAA 84500 34 100.0 38 .................................. GCTCCTTGGCGCGCTCGCGATGAAACGCCCGGAGCTTC 84428 34 97.1 42 G................................. GCTCTCTTCCGCTCCTCCTTTTCCTCCGGAGGAGGCGGCTTC 84352 34 97.1 0 G................................. | ========== ====== ====== ====== ================================== ========================================== ================== 12 34 98.0 40 TCAATGGGGCCGCCGACGATCTCGGCGGATCAAC # Left flank : ATGTAATGTTCGCGCATGGCCGCAAGTCTCATCATCTTGTCATCAATGTGGCGAACAACGTCCTCAAGCAAGCGCACGGATTCCGAAAGCATTTGGACGTTGTGTTCGGGCTCCCGACCTTCTGCGATGCGCGCCCGATAAGCCTTCAACTGGTCTTCTGTGGAGAGAATGGACCGAATCTCTTGCAGCGAGTAGCCCAGGGCTTCCTTGAGGCGAAGAATGTGTTCGATGCGTTCAATCGTGTCTTCGTCATACACCCGATGTCCACCCGGCGTTCGCGGAACCTCAGGAATGAGACCCTTCTCTTCGTAATAGTGGAGCGTGCGCGGGGTGACGCCCAGTCGTTCCGCCACGGCCTCCACGGTCCACAGTTTGTCGCGATCCATCTTCCACCTCCTCAGCTTCTGCCACACCCCAGTGTACGCCAATCAGAAACTCACGTCAACGTGAGGTTTAGGGCGCGCATACTCGCATCATCTGAATCAGGTAGAAGGGAAGCT # Right flank : GCTCTCCACGCTTCACAGCCCGCTCTTGGCGCGGCTTTCCGGGCGAAAATCGCGAACCTACACGGCTCGCATCCTTTTCAGATCTTCCAACTGCCCTCATCATAGTCTCTCACCGGTCAAAAATCCAGTCCCCATGCGGAATTTGCTTATTTCGCGAACCCCCTGGGTTTTCGCCATCGATTCAGGTTCGCGCTTCTTGAATCGTTGCAGGCAGACGCATGTACCATGCATCCCTACGCAGATGCACTCGTTCGATGATGGTGCCTGTTTCAACTGCCCCTGTACCGAAGAACTCGAGTTATCGTGTGCCACACGTGCTCCAAAAACACGTTCTCAAGCTCCCCATCGCGCGCTATAATATCTCTTCTACTCCCAATCTCAACATGGTGAGATCTAAGGGGGTGGCCAATGAGTGGTTGCTCTCGCTGCATACGTTCTCGTAGCGGTCTTTGCGGCGTTGTCTGGGTTGAACGATGGAGGCAATTTGCTCGCGGTGCTCG # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TCAATGGGGCCGCCGACGATCTCGGCGGATCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-13.10,-13.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [36.7-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,0.64 Confidence: LOW] # Array family : NA // Array 2 114190-115918 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADPKZ010000039.1 Alicyclobacillus mali strain FL 18 k89_134, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 114190 37 86.5 36 T.G.G.T..............G............... GAAGAAACAGGAAATGACCCCGAGCATCTGGTCTAT 114263 37 100.0 37 ..................................... AAAAGAAAAAGCGGAAGTCGACGACGACGCGGCGGAA 114337 37 100.0 37 ..................................... ACCGCTTCTTCTCGGTGTTCGATCTCAACCAGTGGAC 114411 37 100.0 36 ..................................... TGAGCCCCAGCGAGCGCGCCTGTTTATAGGCTGTAT 114484 37 100.0 37 ..................................... CAGATGTGGGCCGGTGGAGTGTCCCGTCGATCCCGAG 114558 37 100.0 37 ..................................... GCGCGGCGGGAACGGGGTTGGATGGCGGACAAGCAGG 114632 37 100.0 37 ..................................... TGAGTTGACGCGTGGCGGATGAACCGAAAGAACCGCG 114706 37 100.0 35 ..................................... GATCGACGAGAGCTCGTCGATATAGGTCAAGGACG 114778 37 100.0 38 ..................................... AACGGTGATATTGCTACGGTATCAGGGCTCGCGACGCT 114853 37 100.0 37 ..................................... GACGGTCGCAAATGGGGAGGTACGTCGATCGGAAGCT 114927 37 100.0 36 ..................................... GGATACGACCAAACCCACCAAAAAGCATCTGTAATA 115000 37 100.0 39 ..................................... GAACCGCGAGAACGTGCCGTGGCTTGTGGAGTATTATCG 115076 37 100.0 36 ..................................... GTGCAACGCTGGCGCGCGGCGAATCGGCGAATTGTT 115149 37 100.0 37 ..................................... GCTTGGAAGCACGGGCGACGCCGTGAAGACGCTCCAA 115223 37 100.0 35 ..................................... TTTGCCTTCCAGCCCTCGCGAGCCTCTATCCAGTC 115295 37 100.0 36 ..................................... TTGACGGGTGCGCGCCTTATCCACCACGTACGTCGT 115368 37 100.0 36 ..................................... GGAATCAGTCTTTACAACTGGATTGACCGAGAAAAG 115441 37 100.0 38 ..................................... GCAACACGTATGACGTGGACCCCGCCCCACTTCTCGCG 115516 37 100.0 36 ..................................... GTTATACATGCGGGCGTAGTGGAGCAGACGTTCTTT 115589 37 100.0 36 ..................................... GTCGAAGGTAGAGAGCGGTACGCCGCCGCGTGACCT 115662 37 100.0 36 ..................................... ACAGCATCAGGCGTTGCTTGAGACGATGGAGCGGTT 115735 37 100.0 36 ..................................... GGGAGAACCCACTTCGTTAGCGGGAATAAACGAGAG 115808 37 100.0 37 ..................................... GCTCGCGGAAGAATACCCAACCATCGAATCTGTGTGG 115882 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ======================================= ================== 24 37 99.4 37 GCTTCAATGGGGCCGCCGACGATCTCGGCGGATCAAC # Left flank : GCAGCCTTTGGTCCACCTATGCCATCAGCTCCATTGCTGGAGCGGCGTTCAGTGGCTGGATCTCCAAGAGACGCAGGACCGGCGTCGTCATGGCGATGATGATCATCGGATGGGGCGCGACGTTCGCGCCGGTGTTCTGGATCCACGCCTTCACGCTCATCTACGTGTTCCTCGCCTGCGCCGGACTCCTGTTTGGCGGGTATCCACCACTGGCGCGGACCGTCGTCCAGAGCTCTGTGCCGACACAGGTCATGGGACGCATCATGGGCCTACGGGGCTCACTCATTGCACTTGGCCCGCCGATCGGCTCGTGGCTCGGTGGCATGTTGGACAGATAGTGCAGTCCTTCGGACGCCATCGCCCTGATCGGCATGGCCATTATGGCACTCGGATGCTGGCTTGGCTCACGGGATGACTTTCGGAGGATAGAAGCTTAAAAGCGGAATGCATCGCCACGATTAAAGATGTTCGAAGAGGGCGGGTGATTACCGCCCTCTTTG # Right flank : CTCTACGCCCCTGAGCCCGCTCCTGGCGCGGCCTTCCGGGCGAAAATCGCGAACCTACGCAACGCGCGTCGTTCACGCGCCTTCCAACTGCCATCATCATACCCTGTCTATGCTCAAAAATCCAGCCCCCATGCGGAATTCTCGCATTTCGCGAACCCCCCGGGTTTTCGCCATCGATTCAGGTTCGCGCTCCTCACCCCGCCGCTTCTCAGTATCGTGATCCATGGCACCACACGCCCCGCTTCGCCCCGGACCTCGTCTGCGAACGGGGCCGTCCGAATTCCCCTGCTCCTTATGTTCTCACCTGCTCCCCTGCAGCCACGCAACAAAAACGGGGCCACACCGGGCCCCAAAGTGAGTGCCATGCCGAGTTGGAACCATCCTCGCAGAGCGCCGAGATCGCGGGGCTCATCAGCCCGTCGGGCTGAGCCGTCACGCCTCCACAAACTGTTCCTCCTCCGTGGAACCGGTGAGCGCCGTCGTGGACGAAAGTCCGCCAG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTTCAATGGGGCCGCCGACGATCTCGGCGGATCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-13.00,-13.10] Score: 0/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [46.7-31.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0.41 Confidence: LOW] # Array family : NA //