Array 1 373614-371269 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB892158.1 Streptomyces sp. PsTaAH-124 B086DRAFT_scaffold_1.2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 373613 29 100.0 32 ............................. ACCTGCGCGAGCGGCGAGGTGTCCCACAGGGA 373552 29 100.0 32 ............................. CGTGAGCCGCTGGGGCCGCTCCCGAACACCAA 373491 29 100.0 32 ............................. TGCTGCCAGGTCTCGTCCGGCGGGATGGACTC 373430 29 100.0 32 ............................. ACCCCGAGATGGTACTCACTCGCGCAGCAGTC 373369 29 100.0 32 ............................. CCCCCGAGCGGCGTCTCATCGCTGCTCGGGGG 373308 29 100.0 32 ............................. CGCACCGCCACACACCGCCCGGCCCTCCGCCG 373247 29 100.0 32 ............................. CGAGTAGGTGCCCGACTGCCCTGCCGCCGGGC 373186 29 100.0 32 ............................. TCGGAGCGCACCCGGTGCGTGGTGGCCATCCA 373125 29 100.0 32 ............................. CCGGAATCCGAGATCTCGATCGCCCTGGCAAC 373064 29 96.6 32 ............................C GGCTCGGGCTCGGCCTCGGCGGCCAGCTCGGT 373003 29 100.0 32 ............................. CACGATGACGTTGCCGAGGCCCTCGGATACAG 372942 29 100.0 32 ............................. CAGGTGGCGGCATGAATGTAGAGCAGTGGAAC 372881 29 100.0 32 ............................. TTCTCGCACCGGCGGGCGGCCCGGTACGACGG 372820 29 100.0 32 ............................. ACGTACGCGAACCAGCCCCAGCCCCAGTCGAG 372759 29 100.0 32 ............................. CCCGGCCGGAAGCCTCCGACGCCGGACCGGAT 372698 29 100.0 32 ............................. ACGAGCGTCGTGTGGGCGTCAGCGGCCAGCAG 372637 29 100.0 32 ............................. CGGTGGCAAGGGTGTGGCCCGGTGGAGGAACA 372576 29 100.0 32 ............................. CACCACGACGACGCGTCCGAGGCCTACGCCGA 372515 29 100.0 32 ............................. TCCTCGACCACGGCGACCGCGCCGATCGTCCA 372454 29 100.0 32 ............................. TTCGAGCGGCCGGTGGACGAGGACCCGATCGC 372393 29 100.0 32 ............................. GCCACCCCCATGACCATTCAGACCACCGAAGC 372332 29 100.0 32 ............................. CTCCGGGGTGAGCGGGATGACCGGGAGGAGAA 372271 29 100.0 32 ............................. TTGCGGTGCCGGATCACGCCGAGCCCGAACAT 372210 29 100.0 32 ............................. GATGAGGAGAACCTGATCACGGCGGTCGCGGC 372149 29 100.0 32 ............................. CCCACTTGGGTGCCGCGACACGTCGTGGTCCG 372088 29 96.6 32 ............................A GAACCGTCCAAGTAATAGGGGGATCAAGAGCC 372027 29 100.0 32 ............................. TCCAGCCCGACGTCGCTGATGATGAACGCCCA 371966 29 100.0 31 ............................. TAGTTGCTACGGTGGAGACCTCGTCGTTGCA 371906 29 100.0 32 ............................. ACGGCCCACGCCGCCTCCATGTCCCCGCTGTT 371845 29 100.0 32 ............................. TCCGACCCTGCGCCGAGCGACGTCTGCTCGCC 371784 29 100.0 32 ............................. ACTCGGGCCCGCGCACGTAGTGTCCGGATCCG 371723 29 100.0 31 ............................. GAGGCTCGCACGAGCCCCGTGCTCGGCGCGT 371663 29 100.0 32 ............................. GCGTACAAGCGCGGGGATCAGGTTCACGTCCG 371602 29 100.0 32 ............................. AAGGCGTATCGGGCCGGCGCCCTCGGACGCCG 371541 29 96.6 32 .................C........... CTCAGTGGCACACGATCAACGTTCGATGTCAC 371480 29 96.6 32 ............................A GAACTGCACTTTCTGTGCCATTGCTGCGGGGG 371419 29 100.0 32 ............................. GAGATCAACCCGTGAGCGCCCTCCCCGTCGAG 371358 29 93.1 32 ...........A..............T.. GCCGAGACCGAGCAGAAGGGCCCGCAGGGCAC 371297 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 39 29 99.5 32 GTGCTCTCCGCGCGAGCGGAGGTGGTCCG # Left flank : ACGACGACGGAGACGAGGCGGTGGCGGATCCCTTCTGAATCCGACACCGGCGGCCACCCACCGCGTCGCGCCGCGCGGGATTCCTGTCGCCGACGGTGTTGTACCGCGCTCTTCCGAGCCATTGCGGCGGCAGGATCGAACCCAACCCATGCCCCTTGCCCTGCCCGCCTCATGCCGCACCACGACACCGAGAACACCCTCGCGATCCGGCGATTCTCCGCCCCTCGCACATCACGAGGCACAAACTCACCCGGTTCGTGCACCTCACCTCACAACAAGCCCACCCGGCAGCGCAACGGGATGAACTGTCCGGCACTCAGTCACGCGGTGCGATCGGTCAGCTTGCTCCTGCATTGACGAGGACAAGCTGACCAGCCACTCCTGTCCCCTGAAAGCCGGCGCCGACTACAGTGCATGCCATGCCTGCCACTCACTTGCCACCGAGCACCACCCCCGGCAAAGAAACAGCAAAGCCCTTCTGATACTGCAGGTCAGGAAGG # Right flank : ACGACTGGCTGAACAGCGAGGGGCAGCGCATCGGCAGACGCATCCGCGACGTCCGTGAGTCCCGCAACCTGACCCAGGAGCGGGTGATCCTCGCGGTGCCGATGAACAGGGCCCACTACCAGGACATCGAGGCCGGCCGGGCGAACCCGACTTTGCGACCGCTGCTGCGTATCGCGCGGGCCATCGGGGTCCCTGTGCACGAGCTGGTCAGCTGAGCGGCCGCCCTGGCGGGGGATTGCGGGGGCGGCCGCTCTCCCGCGCCCGGCGCTGTCGGCAGCGAGCCAGGAGCGGGGGGCTCGGCCGACCTACCGCCGCAGCCACCGTGGCATCGACTCCGGCACGGTCTGCTGCGGCGCGGGAGGGGTGCACGGCCAGCGGTGACGGTGTACCGGGGCGGCCACCCCCGATCCGGTCTCGATGTCCGTGGTGTCGAACTGCTCACCGGGCTGGATTGGCATGGCACAGTGGTCGCAGATCATCAGGCGCTGGCCCTTCTGGGC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCTCCGCGCGAGCGGAGGTGGTCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCTCCGCGCGAGCGGAGGTGGTCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.10,-11.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [33.3-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 391960-388942 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB892158.1 Streptomyces sp. PsTaAH-124 B086DRAFT_scaffold_1.2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 391959 29 100.0 32 ............................. GCGTCCCTCGACGCGCAGGTCGTCGTCGACGC 391898 29 100.0 32 ............................. CCAGCACACCGAACGCACGGGGGCCCCATGAG 391837 29 100.0 32 ............................. GTGCAGCTCAAGGAGCGGAGGAACAGCCCGCA 391776 29 100.0 32 ............................. CTGGTCTTTGAGGAGGGCGCGGCGTTCCTCGA 391715 29 100.0 32 ............................. CCTGTGCGCGCGACTGTCATCCTCCACCCCAG 391654 29 100.0 32 ............................. AGACAGCATGCCTGCGACCGCCGCCCATGAGT 391593 29 100.0 32 ............................. CCCATCAGACGCGCCCTCCGTCCGACCAGCCG 391532 29 100.0 32 ............................. CTCTACGCCACCGGCAAGGGCACCGGCCAGAA 391471 29 100.0 32 ............................. GGGTGTCAGGCGCGCCGCATGGCCTCCATGCG 391410 29 96.6 32 .......................A..... CCAGCACACCGAACGCACGGGGGCCCCATGAG 391349 29 100.0 32 ............................. TCCCAGGCATCCCGGGGCTTCAGGAAGGCTGG 391288 29 100.0 32 ............................. CCGTCGAGCAGGCACGGGCCCGCCCCGCGACG 391227 29 100.0 32 ............................. TCCCAGGCATCCCGGGGCTTCAGGAAGGCTGG 391166 29 100.0 32 ............................. CCGTCGAGCAGGCACGGGCCCGCCCCGCGACG 391105 29 100.0 32 ............................. CCTTTGACCTGCTCCTCTGTGGACACCCGGAG 391044 29 100.0 32 ............................. GAGATCCGCTCCCCCGACTTCGGTCGGGAGGA 390983 29 100.0 32 ............................. TCGTCGACGCAGGACAGGATGAGCGGGGCTTC 390922 29 100.0 32 ............................. GTGAGACCCGCCTGATTCATCAGGTAGACGTC 390861 29 100.0 32 ............................. ACCACGGTGGAGACCGTCCGCGCTCACTGGGG 390800 29 100.0 32 ............................. CTGCGACACGCCCTGTCCGGGCCGATCTCGAC 390739 29 100.0 32 ............................. ATGTGCACGGGCAGCCCGGCGCAGGTGCGGCG 390678 29 100.0 32 ............................. GTGTCGGACGAGGCCCTGTACCGCAAGATGGG 390617 29 100.0 32 ............................. CCGCCGTCCACCCGCACCGGACACAGCCCGAT 390556 29 100.0 32 ............................. CGGCGGTGCGGGGGGACAGCTCGACGGTGATC 390495 29 100.0 32 ............................. GCGACGAGGCTCTACGAGGACGGCACCCCGGT 390434 29 96.6 32 .......................A..... CCAGCGAGCGCGAGGGAACATCGCAGGCGGGC 390373 29 100.0 32 ............................. CCGCCGGCGACCACGACCTTGACGGGTGCGGG 390312 29 100.0 32 ............................. CGGATCCGCAGGTTGGTGGTGCGCGCGCTCGC 390251 29 100.0 32 ............................. TTCAGCCTGCGAATCCCCATCCAGGTGCGACG 390190 29 100.0 32 ............................. CGCGAACAGCGTCTCCACGTGCCCTTGCCGGG 390129 29 100.0 32 ............................. CTTGCGGCCTGGACCCGCCCGGCGAGCTCGGG 390068 29 100.0 32 ............................. TCCGAGCGTCTGTTCGTCGCCCGGCTCTGGGT 390007 29 100.0 32 ............................. CAGGACCCGAGCGACGCCTACGCCTACCTGCG 389946 29 100.0 32 ............................. ACGCCGAGCCCGGTGGAGTCCGCGGCGGCCTG 389885 29 100.0 32 ............................. CCTGCGCGCGGCCATGGGGAAGTGAGCATGGC 389824 29 100.0 32 ............................. CGTTCTCCCGCGCGCTCACCTTCGCCGGAGCC 389763 29 100.0 32 ............................. TGGCTGAGCGCAGAGTACGCGTACCCCGGATC 389702 29 100.0 32 ............................. CTGCAGATCCTCGGGGACTTCCACGTTCAGGG 389641 29 100.0 32 ............................. GTGCTGGGACTGATCCGGCTGAGGCGCTGGGC 389580 29 93.1 32 ....................AA....... CCGATCGTGGCGATCGTGCTGCGGCTGGCGAG 389519 29 100.0 32 ............................. ACCAACGGATACCTGGCCGACCTCTGGGTCGA 389458 29 96.6 32 ......C...................... GCTCGGGTGGTGGTGCCGCAGTCGATGCTGGA 389397 29 100.0 32 ............................. TGGTCGGCTTCGTCCGAGCCCGGCGCGATGCG 389336 29 100.0 32 ............................. ATCCTTGGCGTTCCAGCCCGAGGAGGCCGAGC 389275 29 100.0 32 ............................. GCGGGCGTGCTGCCGGGGATGAGGCGCTGGAT 389214 29 100.0 32 ............................. CGACCACAACCACGTCGGCCCGCCCGAGGTGA 389153 29 100.0 32 ............................. CGGCGTGCCGTGCGAGAAACTGCGGGTGCAGA 389092 29 100.0 32 ............................. GAGGACCTGCGCGCCGCGAAGGCCGGCACCCA 389031 29 100.0 32 ............................. GCGATGGACGCCGCCCGCCGGGCCGGGGTCGC 388970 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 50 29 99.7 32 GTGGTCTCCGCGCGAGCGGAGGTGGTCCG # Left flank : TCCTCGAAGGACTCGTGGGCCATGACGTGGCACCAGTGGCACGCCGAATACCCGACGCTGAGCAACACAGGCACACCCCGCCGCCGCGCCTCCTCGAACGCCTCCGGCGTCCAGGGCCACCAGTCGACCGGATTGTCAGCGTGCTGAAGCAGATAGGGCGAGGTCACACCAGCCAGCCGGTTCATGCGGCCAGCCTCTCACGCCGCCCGGCCGTGACGACTGAGCCCGCGATCCCATCCTTGCGCCCGACGGGCTTCCGCTCCCGTACCGCGCCGGTCGCCCTGCTGGAACCTGCAACGAGTCAATCGCCCTGCTCAGCGCTCAGCCAAGCAGAACGACCGGTCAGCGTGCACTGACGGGCCACGCTGCCGAGCCACTCCTATGCTCTGAAAGCAAGTGCCGTCTACAGTGCATGCCATGCCTGCCATCCACCTGCCACCGAGCAGCACTCCCGGCAAAGAACCAGCAAAGCCCCTCTGACACTGCACGTCAGAAAGGGG # Right flank : GTCCGTGAGTCCGTCCGGTCTGGTATCTACCTCGATCCGAAGCGGGGCGAGATCACCCTCGCCGCCTGGTGGACGGAGTGGTGGCCCGGTCGCGAACCGGCCCGCCCGACCACCCGACACCGCAAGCTGTCCCTGTGGACCGCGCACATCGAACCGAAGTGGGGCCGACGCAAGCTCGCCTCGAGGCCGACCGGGCAAACCCGGCCCTGCGGACCTTGTTGCGCATCGCGCGGGCCATCGGGGTCCCTCTGCACGAGTTGGTGGGGTAAGCGGCCCGCCCCCGACGTGGGTGGCAGGGGCGGGCCGCGGTCTCACTTGCCGGTCACGGCCGGTGGGGAATCACGAAGCCCCGCACGGGCTTCGGCTCTTGCGGGTTGCGGGAGTCCGGTTGCTGCGCGCGCTTCCACGCCGCGACCAGGTCCGCGTACCGTGGGTCAATCCACTCGGACGACATGGCCACCTCCTGAGTCCAGTTCAGGCTAGGGCCACTCGGGCTTGGG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCTCCGCGCGAGCGGAGGTGGTCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCTCCGCGCGAGCGGAGGTGGTCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.10,-11.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [36.7-40.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 264896-264379 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB892157.1 Streptomyces sp. PsTaAH-124 B086DRAFT_scaffold_0.1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 264895 29 100.0 32 ............................. TGGTCCGCATGCTGCACTCCCCGGTCGTAACC 264834 29 100.0 32 ............................. CAGACTCCGAAATCCGAATCCGAAAGGGATCC 264773 29 100.0 32 ............................. CGTAGAAGTCCACCAGCCGCTTCAGAGCCTGT 264712 29 96.6 32 ............................T ACCTGCATCTTCTTCACCACGGTCCCCGGGGT 264651 29 100.0 32 ............................. GACATCACGATCCGAGACGGCACGGTCGTCTC 264590 29 100.0 32 ............................. TCCGGGCCGGGAGGCCGCATTTGCCAGGAAAG 264529 29 100.0 32 ............................. GCGCTCCGCCACCTTCAAGGAGTCGACGTATC 264468 29 100.0 32 ............................. CGGGTCGCGTTCTCCACGAGTTCGCACACTAG 264407 29 93.1 0 ..............T.............G | ========== ====== ====== ====== ============================= ================================ ================== 9 29 98.9 32 CTGCTCCCCGCACCCGCGGGGATGGTCCC # Left flank : CTCCGGCGTCAATTACGACGGGCCCGACTACGGGGACGAGCTCTGGTGACCGTCATCGTCCTCACCAACTGCCCGGCCGGACTACGCGGCTTCCTCACGCGCTGGATGCTGGAGATCTCCGCCGGCGTGTTCGTAGGCAATCCCTCAGCCCGCATCCGCGATGTGCTCTGGGGCGAAATCCAGCAGTACGCGGGGCAGGGCCGCGCTCTGCTGGCCCACACCACGAACAACGAGCAGGGCTTCACCTTCCGCACCCACGACCACACCTGGCATCCGGCCGACCACGAGGGCGTCACCCTGATCCGCCGCCCCGACCCGAACGCACCCCCCGCCGGTACGGATCTCCGAAACGGACCACCTTCCAACTGGAGCCGGGCCGGCAAACGACGACGCTTCGGGAGAGGGTGATGCGCATCGCAAGGCTTTTATCCTGTATGCCGGAGTCGGGGAAAGTACTCCGAAACGGCTCCCGGTCCCAGTAGAACCGCAGGTCATTCAGC # Right flank : CCAGGTGATCGTCATATAGGGCCCTCAACGTGGTGTCTGTGGGCGTGGCGACGATGTGGTGCGGTCCTGGTTCCTGCTCGGTATCGGTCCATGCATTCGGCGATGCGCGTCGGCGCGGGAGCAGGTCGGCCGGGTCGGTCCACTCGGTGAGATCCCCGTGACTGCGTGTCACGCCATGTAGTCGTACACGCGCCCCACGTACCCGGGGAGCTCGGACAGGCCCAGTGGGACGGCCTCGGCATTCTCGACGACGAGCTCACTGTAGATGCTGCCGAAAAGGTCGACTTGCCGCAGCAGTGGCGTTACGGCTAGGCGTTGTTGGCGTGAGTTGTGTTCCGAGGGTGAAGGGCTAACGCTTTTACGGACTGAAGTCCCCCGGATAGAGCGGGCGTGAGGAGTAGGTGAATCGTCCTTGCTCTCTGCGGACCACGGGATCAGCGGGCGGGGGCTGATGCCGACGTCCTGCCCGGGGCGGTGGAGGCGGCGCGGGGGTGCTGGAC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCACCCGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGCTCCCCGCACCCGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [40.0-40.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 274852-275551 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB892157.1 Streptomyces sp. PsTaAH-124 B086DRAFT_scaffold_0.1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 274852 29 100.0 32 ............................. GAGTCGACCCTGTTCGAGGTCATCCGTCACGA 274913 29 100.0 32 ............................. CGACAGAGGTGGCGGTGACGGTTGATCCAGGT 274974 29 100.0 32 ............................. TACCACCGTGTCCGCGGTCCTGGCCGCCGCCC 275035 29 100.0 32 ............................. TCGGCATCCTCGCGTTTGTGTGCCTCGCTCCT 275096 29 100.0 32 ............................. CAGAACGTGGACCCGTGGAACACCTTGTTCGG 275157 29 100.0 32 ............................. TCGAAGAGGCCGCGGACGTCGTGGGCGAGGTA 275218 29 100.0 32 ............................. TGGGACGTTCCCCGTGTGGCACAGGGGGAACG 275279 29 100.0 32 ............................. GGCACCGCCGACTCGGCGGACCGTTTGCGGCT 275340 29 100.0 32 ............................. CGACCCGCTGTTCCCCGGCCTGGTTCTTGAGT 275401 29 100.0 32 ............................. CACTTGTTGTCCAGGTAGAGGTCGTAGCCGTT 275462 29 100.0 32 ............................. GCCCGGGGGCGTGAAGGTAGTTGGTCAGCCGC 275523 29 96.6 0 ......................C...... | ========== ====== ====== ====== ============================= ================================ ================== 12 29 99.7 32 CTGCTCCCCGCACGCGCGGGGATGGTCCC # Left flank : ACGCCGGCGTGGCCTTACCGATGTCATGCACACCGGCAAGCCACACAGCGAGGGCACGTGCGTCCGCATCACCCTGCGGCAACGCCCCGGCCACCAGCCTGCGCACCCCTACCGGCAGCCACCGGTCCCACAACAGGCCCGCCACCGCAGCGGCATCCTCCATGTGCCGCCACAACGGCAACCACCCATCGGTATCGCGGTCATACTTGGCCCACACCGACCGGGCGGACCCCCCGATCCGACCCAACAGGCCGGCACAAGCGCTCCCCTCACCACTCATGAGCGATTGATACAGGCACCGACCACCACCTCACACGAAAACAAGCCAATAGAAGCAACTACAGACAAACGGCCACCCCCGTCACATACGATCGTCGGCTTCCCCCTGATCCACCGAGAACCGTCTACGAGACCACTTACCACAAATGCCCCATTGGCCGGAATCTGCGAAAGTTACTGAGATCGTGTCCCTGCGGCAATAGACTCGCAGGTCAGCAAGA # Right flank : CAGGCAACTCCTACCGCCGGCCCGGCGGGGACGCTGCTGTCCTGTCTCAGCGCAGTTAGTCGGCGGCGTCGCGTTGACCTGCGAGGGCTGGATTGGGTGAGACGGCTACCCAGCCCCGAACGTCTGAAGGCGAACCACATCCCCTTCAGCGACGCCCCCGGCGACCAGACGTCGCAGGTCACGCCCTGACTGGTCTCGTCCGTGACATCTGATCAGCACGACTCAGCAGGTCTGCGCTCAGCGTCGCCTGCCCTCGGCGCCCCATCGATGCTCGCCCCCTCGACAGGGTCTGACCTGCCCGACAAGGTGCCTGACATGCCATCAGGACGAGCGTCAAATGAGCGTCACGGTATCGCCCGTAACGCCCATAGCGCACATCATGCGCATCGACTAAAGCCGCAGGTCAGCGGCCTTTCCCGACAGGTTCAAGGATCGCCACGCACTCCACATGATGCGTCATGGGAAACAGATCGAACGCCCGAAGCATCCGCACCCGGTAC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCACGCGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCACCCGCGGGGATGGTCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [48.3-31.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 198448-199467 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB892209.1 Streptomyces sp. PsTaAH-124 B086DRAFT_scaffold_9.10, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 198448 30 100.0 36 .............................. ACGGTGTACGTGGTCGCCTCACGGACGAGACGGCGC 198514 30 100.0 36 .............................. GACGCTCCCGCGCGTGGATCTCCAACATGCTCGGAG 198580 30 100.0 36 .............................. CGTGATCGCGTCGGTGACGATCCGGGCGAACGGCTC 198646 30 100.0 36 .............................. ATGGTCGCCGCGCTGGCGAAGGTGTCGAACCGGGAG 198712 30 100.0 37 .............................. GTGCACGCCCACACGATCTTGTGCCCATCCGCGCGGA 198779 30 100.0 34 .............................. CCGAGACCGATCCGGCAGCGTCGCAGATTCTTGC 198843 30 100.0 36 .............................. CGCTCCTCACCACGGAGACCGGGAAGCCGGTCGGGA 198909 30 100.0 37 .............................. ACCTCCGGCACCTCCGCGAGGTGGGTGATGACGACGG 198976 30 100.0 34 .............................. AGCGAGTCCGCGCCGAGCCACGATAGCAGCGCCG 199040 30 100.0 36 .............................. GCCATCGGGCCGCCCTCGACGTCACCGCCGACCCCG 199106 30 100.0 36 .............................. CCCGGCGGAGATCACGATCAGAGAGCAGCACCCCCG 199172 30 96.7 38 .C............................ CCCTCCGCGCCCAGGCCGCTGTCCTCGACGCTCGTCTG 199240 30 96.7 37 .C............................ GCGGGGGCAGCAAGTGACGAACAAGCTCGTCCAGCTC 199307 30 96.7 36 .........T.................... GTGATGTCGGTGCGGGAGACCGCGACGATGCCGTGG 199373 30 93.3 35 ...........G............G..... GGCCACCTTGTGCCGGTGGTGAAGCTTCCGATGCT 199438 30 70.0 0 ....G...G..........AT..CT..CCA | ========== ====== ====== ====== ============================== ====================================== ================== 16 30 97.1 36 GTCGCTGATCAACCCTGGAGGGTTCGGAAC # Left flank : CGGGGCCGCCGTCCGGCCCGACGACCCGCTTCTGCGCCGCCCCCGCGATCTTGCCCTGGTCGGTGGCGATGTCGTTCAACGGCTGGTACCAGGCGCGGATGCCCATGTCACCGAGGGCGCCGAGCACCCAGTCGTCCAGGTAGGCATAGCTGTCCTGGAAGGACAGCCCCTGCACCAGCGCCTCGGGCACCGAGAGGGAGTAGGTGATGGTGTTGCCGGGCTCGACGAAGGGCGGCCGGGGAGGACACTACGATCCCTGAACGGGGCCGACAGTGGCCGCGAGCTCTTCGCCTCCGCGGCTGATGTGGGACCTGCACCGGGGCGAGCAAGCAGTAGCGGTTGCTGGTAGGAAACCAGGAAAGAGAAGACTCAAGCGGAACCGGCTGACGATATAGTGAGGGAGCGCTTCGACCTGCACAGTTGCACTACCGGCCGGTTGCTGCAGTCTTCCTTGCCGAGAGTTTTGCGAGAGCAGACGCGACCTGCGGCTTTACCCTCGG # Right flank : ATGGCTTCATGGAGCTCACTCGAGGCCAACCCAATCGGGCCGCTTATACCATCTTTCCTGGCTCATTACTGGGATTATCAGGTTCTCCTCCTGTTTGAGAAACAACCCTCGGTACGGTGCGAAGCGATATGGCGGCAGCAGGCCGGGTGCTCCCCGGCGGAGCTGGCCTTGGGTTGAACGCATGGATGCGGAGAGCTCGTGAGAATCAGGGTGGACGTCGAGACGGACGTGCCCTTTCTGGGCTGGAAGGATGTGCACGGTCCGGCGCGTGCTGTCATGTATGGGTTGCTGGGAGAACAGGATCCGCAACTGGCTCGTGCTTTGCACGACAAGGGGTGGCAGGGACACTCGCTGCGTCCGTTGGGGATGACGAGTCCGCAATTCAGGGGAGCGCCGCGGAAGAAGGGCGTCTATACGACGTCGCGGGACGGGGCGATCTGGTTCGGGTCGCCGGTGCCGCAGATCGCCTCGGCACTCATCGCGGCACTGGCCGGTCGGAC # Questionable array : NO Score: 3.11 # Score Detail : 1:0, 2:0, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTGATCAACCCTGGAGGGTTCGGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [6,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-5.20,-5.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-12] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [40.0-43.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.37 Confidence: LOW] # Array family : NA // Array 2 208107-209057 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB892209.1 Streptomyces sp. PsTaAH-124 B086DRAFT_scaffold_9.10, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 208107 30 100.0 36 .............................. ATGGCTGACGGCTGGGCGCAGTACGGCTACGCCACC 208173 30 100.0 34 .............................. AGCATGGGACAAGGACGGCATGTGGATCGCGGGC 208237 30 100.0 36 .............................. GCGGTCGGCGCCTCGGGCGGCAACTTCCGGATGCTC 208303 30 100.0 37 .............................. GCGCCACCGTCGCCGACCTCGCGGTCGTGGTCTTCCT 208370 30 100.0 37 .............................. CGGATGGCGTGCGTCAGGGCGGCGAGGACGCGGCCGA 208437 30 100.0 34 .............................. GCGGCCTGGCGGGAGTGGGCCGAGAGGGTCTACC 208501 30 100.0 32 .............................. GCGGCGGTCATGCTGCTGCCCCTGCCGGACGG 208563 30 100.0 37 .............................. ACGCCTGTGTCCCCCATCTTGACGTCGAGCTTGGGCA 208630 30 100.0 35 .............................. CACGGTCCACCGCAGGCGCCTCGCCCTCGATGCCC 208695 30 100.0 37 .............................. ACTTACGGAGCGACCCGCGCACTACGACTGAGGAGAC 208762 30 100.0 38 .............................. GGGCCCGCGTAGACCTGCGCGGTAGACACGGTGATCGT 208830 30 100.0 37 .............................. ACGAACAGGCGGTCAGGAGGTACAGGGAGCGGGTCGA 208897 30 100.0 36 .............................. GCAACCCCGACGTCACCATGGTCTCCACCGTCCTGG 208963 30 100.0 34 .............................. CACATAGAGGTGCGATCAACGCCCCTGGTGTGAC 209027 30 100.0 0 .............................. | T [209053] ========== ====== ====== ====== ============================== ====================================== ================== 15 30 100.0 36 GTCGGTGATCAACCCTGGAGGGTTCGGAAC # Left flank : GAAGAACTCGCCGCCAGCGTCCACCACCGCTCCCTCAAACGGAAAGTCTCCTACGAGGAACTCATCCATCTGGAAGCACTCAAACTCGTCCGCCTGTGCCTGGAAGACAAGCCGTACAAGCCCTTCCGGCCGTGGTGGTGAACGTCCGTGTTCGTCATCCTTGTGTACGACACCGCTGCTGAGCGGAACCCGAAAGTCCTCAAAACCTGCCGCAAGTACCTTCACTGGACCCAACGCAGCGTCTTCCAGGGCCAACTCTCCGCAGCCCAGTACCGCTCCCTCATGGCAGCTCTCACCGCCGTCATCGACACCGACTACGACAGCATCGTCACGTACACCGCGAGATCCCCGGAACTGATCGACTCCCACACGCTCGGCGTCGATCTCGGAGGCCCAGGAGACATCCTCTGACCTGGTCACATGCACTACCGTCGGACCGCTGCAGAATGGAAGACGAGAGCTTGCCGTCTTGCTGCTGTGAGCTGTGGCTTTACCGTCGG # Right flank : CGCGATATCGGGCATGGGGCGCCGACTGGATCGACGACCTGGACCCTTCATCTGAACGAAAACCGCCGACGAGATCCTCGACAGAGTCGACGCCCGCTGCAAGAGAATCTCCGACTCGGGTCACTGATACGTGAGGCAGCAGTGCCCTCGCGTTGCGACGAGCGTCGCGCCGCCGCCGGAGGTCCGCCGTCGCACCGCCTCGATGCCGTGCCGCGCGGCGCCGCCGGCGTCCCCCTCGTTGCGCAGCGACTGGAGGCTGCCGATGATCACCGCAGGGGCCCCGATTCCCGCACCCGCGGCGTCGGGGGCCGCTGCCCGGTCGCGACCTCGGCGGTCGGGCACCTGGTACTCACTACTCACCGTGCACTTCCCGGGCCTCCCTTGCTGCCGCAGGGAGCAACGCCCGGCACGGCCGCGGTGTTCCCGCCCGCTGTGATGCCCCTGTGACCCGGAACTATGGCTTCCGTCACAGCACCCTGCCGTGCCGCCCTGATCGGCTG # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGGTGATCAACCCTGGAGGGTTCGGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [6,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-5.20,-5.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [43.3-38.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.37 Confidence: LOW] # Array family : NA // Array 1 61634-63188 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB892181.1 Streptomyces sp. PsTaAH-124 B086DRAFT_scaffold_30.31, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 61634 29 96.6 32 ............................G CCCTTGAGGCTTGGAATGAGCTGAACGAACGT 61695 29 100.0 32 ............................. CGCTGGGCGTCCTCCCGAACACCAACAGCAAC 61756 29 96.6 32 ............................G GACCCGCCGGCGCTTGCCGTGCCGGTGGTGGC 61817 29 100.0 32 ............................. GGCCTGCACAAGGGGGACTTCGTCCCGGACGC 61878 29 100.0 32 ............................. GCGCCCGGGTCGCCGGCCACCAGCAGGGACTC 61939 29 100.0 32 ............................. CGCCTGGTCCTCATCCGGGACCGGGAGATCTG 62000 29 96.6 32 ............................T CCGGTCACAGCCAGGTGAAAAGTGAGGCCACC 62061 29 96.6 32 ............................T CCGCCCACCGATCCGTCCTCCCCGTCCGCAGC 62122 29 96.6 32 ............................G TTCAGATCAGGGCACCGCTCGTTCGGCGGGAC 62183 29 96.6 32 ............................G TCCACGTTCGCCGCCCAGTACCCGCCTAGCTG 62244 29 100.0 32 ............................. TGACCCGGTCCGCAGCCATGTTGGGGCCGTAC 62305 29 96.6 32 ............................G GGGACATGATCATGCCGACCGGCCTCTGCCTG 62366 29 100.0 32 ............................. CCGGCCTACGTGAACGCGGACGGGACGTACAC 62427 29 100.0 32 ............................. CTCGCGTTGCCGTCGACCGCACCAGGGGACTT 62488 29 100.0 32 ............................. TTCCCGCCGGACGAGCCGGGACGGGGCCACTC 62549 29 96.6 32 ............................G TCGGACTGGCGCAGAGCGCGCAGGTACGACGG 62610 29 100.0 32 ............................. GGTGTCGCCGATCGCCCACCACACCGCGCCGT 62671 29 93.1 32 ...........A.G............... TCGGCATCCTCCCGTTTGTGTGCCTCGCTCCT 62732 29 93.1 32 ...........A.G............... CAGTGACCTCAAGGACTCCGGCCCCCGGCCGG 62793 29 93.1 32 ...........A.G............... CACCAGTGGTCCGTCTCGGGCGGCGTGTCGGG 62854 29 93.1 32 ...........A.G............... TCGACTCGCAGAGGCCGACACGGGACNNNNNG 62915 29 93.1 32 ...........A.G............... CACCAGTGGTCCGTCTCGGGCGGCGTGTCGGG 62976 29 93.1 32 ...........A.G............... TCGACTCGCAGAGGCCGACACGGGACCCGGAG 63037 29 89.7 32 ...........A.G..............G TACGACTACCTGGAGGTCGAGGGAGTCGCCAC 63098 29 89.7 32 ...........A.G.............T. CGCGCCGAGGCCACCGCGACCGTCACCGGCCG G [63115] 63160 29 75.9 0 .........A.A...C......GG..GG. | ========== ====== ====== ====== ============================= ================================ ================== 26 29 95.6 32 GTCGTCCCCGCGCCCGCGGGGGTAGCTCC # Left flank : GCAGCGAGGCGTCCGGCGTCGACCTGGCCCGGGTCGCTCTGCGGGCCGCGATGAAGGCGGCACGCGCCAACGGCGGCGGCCGGAAGGCGAAGGCGAAGCTGCGCCTGGCCCGTACGGTGCGCCGCGACGGGCGTGAGTCGATGGGCCTCAGGGCGGCGCTCGGTGCGCTGGCCACCGAGCGGGCCTGGGAGCTCCCGGCCGCCGGTGCGACGCTGTGGGAGCGGTGGGCGGCCATCGTCCCCGAGTTCGCCGGGCACGTCGCCGCCGTGTCGTACGCCCCGGACTCCGGCCGGCTCACGGTGTGCCTGGATTCGGCGGCCTGGGCGGCGAAGGCCCGGCTGGTGCAGTCCGCCGCCAACAAGGCGGCGGGCTGCACCGTGCACGCGTGGGAATCCTGTCAGGGTGCTGCAGTACATTTCGTTCGCGGAAGACCCTGGCGGTCTGCGAACGAGGTAAAGCAAAATGGCTTGATCACCTGACATCGCCGCAGGTCACGAAGT # Right flank : CCGCCGAGGGTGCGGTCGCAGCCGGAACGGAAGTGGGTGGGGCGTCCGGGGCCTGCGCGTCCGGGCCCTACGGCACACCCCCGGCCGCTGCTACGCTGCCCGTTATGGCCAAACGCATCGAGGTCCCTGTAGACGACGCCGCGTACGCGGCACTCGAAGCCGAAGCCGAACGCGTCGGCATCACCGTGCCCGAGCTGGTCGGCCAGGTCGTCACCCACGATGTCCACCGGCGCCGGTTCCTCACCGCCGCCCAGCACTACGTCACCGCCTGGGGACCCGCGTTCGACGCCGAGTTCGGCACCGGCCGCCCCGACGGTGCCGCCGCGTGATCCTCCACATCGACCGCGCCTGGCTCCTCGACGTCGCCCACCAGTACCTCCGTACCGACCCCGACGTCACCGACTACGGCAGTCTCGCCGCAGCCGTCGCCCGGCACACCGACCAGGTCCTGAACGTCCCCGTCTACCCCGAACCGCACCACCGCGCTGCAGCCCTCATGC # Questionable array : NO Score: 5.53 # Score Detail : 1:0, 2:3, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.49, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTCCCCGCGCCCGCGGGGGTAGCTCC # Alternate repeat : GTCGTCCCCGCACGCGCGGGGGTAGCTC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGTCCCCGCGCCCGCGGGGGTAGTTCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [48.3-21.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 63903-64848 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB892181.1 Streptomyces sp. PsTaAH-124 B086DRAFT_scaffold_30.31, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= =============================================================================================== ================== 63903 28 93.1 32 ....-........T............... CCGGGAGGGGCCACGTGGCCTACGGACCTTGT 63963 28 86.2 95 ..............T......A...-..A GGGTGCTGCATCTCGTTCGCGGAAGACCCTGGCGGTCTGCGAACAAGGTGAAGCAAAATGGCTTGATCACCTGTCATCGCCGCAGGTCACGAAGT CC [63986] 64088 29 100.0 32 ............................. CCGGTCGAGGTACCCGACCAGGAGAAGGCTCT 64149 29 96.6 32 ............................C GACGCCGAGGGGCGTCCGCGCGCCGTGATCGG 64210 29 100.0 32 ............................. CAGGAGCGGGTCACTGCCCGGCTCGCCCGCAA 64271 29 100.0 32 ............................. AGGATCGCCGTCGCCGCCGCGCGGGCGTCGGT 64332 29 100.0 32 ............................. CCCGCCCGGCCCGACGCGTTCATCCAGGCGCG 64393 29 96.6 32 ............................C GGCCCACCCGGAGAAGGGGGACCAGCATGCTC 64454 29 100.0 32 ............................. ACTTGCCCGCACCGGACGTACCGGCGATCAAC 64515 29 72.4 28 ...........A.G..G....C.C..CTA CAGTCTGTGCGGTACACCGGGTCACGCT 64572 28 75.9 32 ....A......ATG..-T..........C TCAGCCTAGGAACGTTCCTATGTCCTCATCCC 64632 29 89.7 32 ......T.......T...........C.. TACGCCACCGTCAAGACCCTCCTCGAGGTCTA 64693 29 86.2 35 ...........ATG..............C CGCGGGGCGGCGCCTGCCGAATGGCCGGCGCCCCG 64757 29 86.2 32 ..............T.TA..........C GCCACCGCCGACGTCACCAACCTCGGCACGCT 64818 29 79.3 0 ........G...G.........G.A..GC | A,C [64837,64840] ========== ====== ====== ====== ============================= =============================================================================================== ================== 15 29 90.8 36 GTCGTCCCCGCGCCCGCGGGGGTAGCTCG # Left flank : CACGATGTCCACCGGCGCCGGTTCCTCACCGCCGCCCAGCACTACGTCACCGCCTGGGGACCCGCGTTCGACGCCGAGTTCGGCACCGGCCGCCCCGACGGTGCCGCCGCGTGATCCTCCACATCGACCGCGCCTGGCTCCTCGACGTCGCCCACCAGTACCTCCGTACCGACCCCGACGTCACCGACTACGGCAGTCTCGCCGCAGCCGTCGCCCGGCACACCGACCAGGTCCTGAACGTCCCCGTCTACCCCGAACCGCACCACCGCGCTGCAGCCCTCATGCACCAGCTGGCCCGCGTGCCTGCCCTGGAGGTCCGCAACGAGCTGTTCGCCGCAGTCGTCGCTGCGGCATACCTGACAGCGTCCGGGCTGACGGTGACGGTGGAAGCGAAAGACGCCGCAGTACTCGCATCCCGAGCCCGAGACGGCCTCGGCGTCCGCGACGTGGCCCACGAAATCAAACAGTCCTGGATCGCCGACTGACCAACCACCGCACCC # Right flank : CACCGGCTGGAGGGGCTGCTGGAGCTGTGGGGAGGCGCGCTGCGGCTGCTGGCCGCCGGCTGACCGACCGGCTGGTGGAGACCTGCGGCAAGGGCCTGGTCGAGCTCCCGTATCCGTGGCTGATCCGACGGGGCCTGGTGCGGCGCCGGGCGTGAACGGACGGGCGGTGCGACGACGGGGTCCGCCTGGGCACCGGGTGGCGGGTGCGAGATGTGCGGGGAAGTGATCCATTTCCGGCGCGCCCGGCGGGTGAAGGCCGCTGTGGGAACAGGAACAGCCCGGCGCGCTCGCGCAGCACCGGGAACGTCCACGGCCTTCGCCGACACAGCCGCTGCCGACTCGGCAGCGTCCTGCTCGGCCACGTTCTCACTGGTCATCGATGCATCCTCCATGATCGGAGTTACACCGAACGATTTACATTTTCCTACTTGGCGCGGTGGCGGTGAAGCCGTTCTCGAATACGCTGGCGCTCGGCGTCTTCAGCGGTGGCTGGAGGCGGT # Questionable array : NO Score: 4.95 # Score Detail : 1:0, 2:3, 3:0, 4:0.54, 5:0, 6:0.25, 7:-0.35, 8:1, 9:0.51, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTCCCCGCGCCCGCGGGGGTAGCTCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGTCCCCGCGCCCGCGGGGGTAGTTCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [7-29] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [36.7-21.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 68411-70058 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB892181.1 Streptomyces sp. PsTaAH-124 B086DRAFT_scaffold_30.31, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================================================= ================== 68411 28 100.0 33 ............................ GTCGAACTCGTACTCAATGCCGTCCCGCTGGTC 68472 28 100.0 33 ............................ CTTGATGAGCTGGGGGTACTCGGGCTCGTCGAT 68533 28 100.0 33 ............................ CTGGGAGGATCACGGGCGCCGGTGACGGCGCAT 68594 28 96.4 33 ...................A........ GAGCCCGTACTTGAAGGGCGCCGAGCGCGTGAC 68655 28 100.0 33 ............................ GAGGAATGGGACGCGCAACAGGTAGACGGCTGG 68716 28 100.0 34 ............................ GCTCCCTGCTGGTCTCGCCCTCGCCCGTCTCGGC 68778 28 100.0 33 ............................ CCTATGTCAGCCTGGTGGCGCCAGGCTTTTTGT 68839 28 100.0 33 ............................ CGGCAGGGCGACGCTGGCGGGCATACTCGTCTG 68900 28 100.0 33 ............................ CCCTGCCAGTCTCCGGAGGTGAAGAGGCCGGCG 68961 28 100.0 33 ............................ GGGCCCCCGGACATGCAAATAGGCCCCCTCCGG 69022 28 100.0 33 ............................ CTTCTGCCAGGGCAGATCGGTGGTGTCCCAGAC 69083 28 100.0 33 ............................ TTTCCTTGGCTGCTTCGAGGAGGTAGGTGGCGC 69144 28 100.0 33 ............................ CTCGGGGATCTCGACGTCCAGTTCGTCCAGCAG 69205 28 100.0 33 ............................ CTGGTCCAGGTTGCCGCCGTTGCCGTGGACCAT 69266 28 100.0 33 ............................ CGCGTTCCGGACGACGGCCGGCGGGATCCAGGC 69327 28 100.0 33 ............................ CCCCTGATGAGAGCAGGAGCAGTCATGACGGAT 69388 28 100.0 33 ............................ GAACCGGCATGCCAAGGCGTCCGCTGACGCCGA 69449 28 100.0 33 ............................ GTTGCCGGACAGCTCCAGGCGGGTGGACTGGAC 69510 28 100.0 33 ............................ GTCCGGGTTGAGTCCTGGTGAAGCGAAGGGCCG 69571 28 96.4 33 ....................C....... CACCGTGGTGACCAGCAGGACCAGGGCGAGGAC 69632 28 100.0 33 ............................ CCCGAAGTACGCGCAGTTCGCGCGGCTCAAGGT 69693 28 100.0 33 ............................ CCTCCGCTCCCTCGCCGCCCTGTGGGGCCCGGC 69754 28 100.0 33 ............................ GCTCCTGCTCGACACCGTTCGAGTCACACGGCC 69815 28 100.0 34 ............................ GGGGGGTCACGCGTGCTCGATTGTGACGTTCCAG 69877 28 100.0 65 ............................ CCTTGCTCTGCATGCCGGTGATCGGCACCCAGGTGTCGCCAGGTCTTGTGGTGTGAGACCGGGCG 69970 28 92.9 33 ...........G.......A........ CGAGTGGGACTCCACCTGCCAGTTCACGGCCGA 70031 28 92.9 0 ...........G..T............. | ========== ====== ====== ====== ============================ ================================================================= ================== 27 28 99.2 34 GTCGTCCCCGCACCCGCGGGGGTAGCTC # Left flank : CCGCCGACGTCGACGACGGCCAGGAGCTGGTCCTTGAGGAGCTCACCCGCGAGCAGGTGCTGGGCTGGCGTACCCGCGCCGCCGCCGACCACCAGATCGTCCACGACCACATCGCCCGGTACGGCGAGCTGTTGGCGCAGCGCTTGTTCACCCGGGCGTTCGTCGCCCCAGGCGCAGCGCCTGTCCCGTCTCGGTCGGCCGCCGGTGCGACGCTGCGGGAGCGGTGGGCGGCCATCGTCCCCGAGTTCGCCGGGCACGTCGCCGCCGTATCGTACGCCCCGGACTCCGGCCGGCTCACGGTGTGCCTGGATTCGGCGGCCTGGGCGGCGAAGGCCCGGCTGGTGCAGTCCGCCGCCAACAAGGCGGCGGGCTGCACCGTGCACGCGTGGGAATCCAGTCAGAGTGCTGCAGTACATTTCGTTCGCGGAAGACCCTGGCGGTCTGCGAACGAGGTAAAGCAAAATGGCTTGATCACCTGACATCGCCGCAGGTCACGAAGT # Right flank : CGCTGATACACGCTCCAGCACATCGAGGGCGGCGAGGAGTCCAAGCTCAGCACGCTGCTGCGGATCGCACGGATCTCGACGTCCCTCTCGCCGACCTCGTACGAGGCTGAGTGCCCCCGGCGCCGTCGGCGATATGGAGACGAGGGGATCGTACGGTGCTACCGCCGCTGCCACCATGGCGTCGGCTCCGGCGCGGTCTGCCGTGGTCCGGCGGGCCGGCACGCTCCGAGGTGCCGGTGGGCGGGGCCAGCCACGCCCGACCCGGTCTCGGGGTGGACCGTGTCGTACGGCTGGCCGGGCCGGATCGGACAGTCGCAGTGGGCGCAGATCATCAGGCGCTTTCCGGGGCCGGTGGCTCGTCGGCCTGAGCGGCGAGCGTGGCGTCTGCGTCGGCCAGCCGGTGTGCGCCTGCGGCGATGAGCCGGGCTACCGTCAGCGGCGCGCACAACTCTGCGGGCGACTCCATCGGCACCGACCAGTACAGGCCCGGCCCGTGGTCG # Questionable array : NO Score: 6.15 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:-0.06, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTCCCCGCACCCGCGGGGGTAGCTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGTCCCCGCACCCGCGGGGGTAGTTC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [48.3-35.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 4 73194-74400 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB892181.1 Streptomyces sp. PsTaAH-124 B086DRAFT_scaffold_30.31, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= =============================================================================================================== ================== 73194 29 72.4 111 ...........A.G.......A.TC.GGT TACGGCACTGCAGTACAGCTCGTTCGCGCCAAGAGCGGAGGACACTGGCGCTCTGGGAACGAGGTAAAGCAAAATGGTTTGATCACCTGACATCGCCGCAGGTCACGAAGT 73334 29 100.0 32 ............................. CCTTGACCACGTGCTCTGACGTGCAGGTTTTC 73395 29 100.0 32 ............................. ACGGCGTGGCGGCGGGGGATGGAGGCCGCGTC 73456 29 96.6 32 ............................G ACGGCGAAGAGCGCGGATGACGTGATGCGCAT 73517 29 96.6 32 ............................G TCCAGCTTGAGAAGGTTCAGGAGTGGCTGGCG 73578 29 100.0 32 ............................. CACGAGCACTACGAGGATTGCCCCCAGCACGA 73639 29 100.0 32 ............................. CAGATCACGAGCGAACAGGCCGACCCTTTCTG 73700 29 100.0 32 ............................. TTGGCCTCCTCCGCTTCGATCAGGCGCAGGGC 73761 29 100.0 32 ............................. GGGGGCGGCGTCGGCTTCGGCTTCGGCGCGGG 73822 29 100.0 32 ............................. TACGACCCCACCCGCGGGGACGACGGCATGCT 73883 29 100.0 32 ............................. TGCTGGAGGTCGCCGGGGAACCCCCAGACGCG 73944 29 100.0 32 ............................. GTGTCCGGCGACGCTCTGAAGGCTGCGGAGAC 74005 29 100.0 32 ............................. CGCGTCGCCCCCTTCTCCACCAGCCCCGACGC 74066 29 100.0 32 ............................. TGGTCCTTCTTGATCTCAGCGCCGGCCCGCGT 74127 29 96.6 32 ............................G CGCAGGTTCGTGTAGGCGCAGGTCCCGACGTG 74188 29 96.6 32 ............................T CCCCAGCAGGTGTCCTACGAGACGATCGGCCC 74249 29 93.1 32 .................A..........G GGCTCGGATCGTGTTCGAGCCGCCCCAGGTGA 74310 29 89.7 32 .................A.T......C.. AGCAGGGCGCGCGCATCCCCGCCGGTCCCGAA 74371 29 96.6 0 ..............T.............. | A [74392] ========== ====== ====== ====== ============================= =============================================================================================================== ================== 19 29 96.7 36 GTCGTCCCCGCGCCCGCGGGGGTAGCTCC # Left flank : GCGCACGCTCTGCAGGCGGAGATCGCCGCCCGGTCCGGGGCGGAGAAGCAGGCCAAGGCGGCGCTCGCGCTTGCCTGGTACGACATGGACCGCGACGGCGATCCGGCGGGCACGTCCTTCTCGGCCGCCCATCTGAGGGGGTTCGACGGCATCATGCAGCTGCACGTCGGCGATCCGGGTGCTGCACACGACCACTTTGCTGGATCGGCCGCTGCTCTTTCTGCGCCGCGGGAGCGGGTGCAGCAGGCGATCGTCGCCACGGATCAGGCGCTGGCCCGGATCCGGCTCGATGAACCGCAGGCGGCGGCCGTGCTGCTGCACGGTTGTGTCACTGCGGCTGCGTCGACGGGTGGCCGTGTACCAGCGCTCCGAATCAAGGCGGCGCGGCGGGAGCTGCGTCCGTGGCGGCGGGAGAAGCGGTTCGCCGACCTAGACGATCGCCTGATCGACGTGCTCGGCTCCTGACTCCGGGCATGACGAAGCGCCCCATGACGGTTCGC # Right flank : CTCACGTGTCGGCTTCATTGTCAGTGGCAGGGCCTATGGTGCCGGGCAGCGGATTTGGGGGGTGGTTTCGTGGACGATGAGGCTTCGGTCGTCGAGTTGATGCGGGCGATGCGGTTGTCGCCGGAGGTCGTCGAGCGGGTGTCGCGGCTGTGGGGAAAGTCGGCCGCGCGCAATGGTGGGCGGACACATCTGCTGCTGGGGCATCTGCTGGACACGGCTGCTGTGGCGGGGGTGATGTGGGACCGGTACGTGTCGGCGGCGTTCCGGCGGCGGCTGGATGAGATCAGCGGTGGCCGGGGGCGGTTGTGGTTCATGTGGGTGTGCGGCATTCATGACTGTGGGAAGGCGTGCCCGGCGTTCCAGGCGATGGATGCGGCCGAGGCCGCGCCGGTGTTGGCAGCGGGGCTGTCTTGGGGGCGGCTGTCGGCGGCCCCGAGCAAGCGGTGGCGTCATGACATGGCTGGTGCTGTCATGTTGCGGCCTCGGCTGGTGATGGAGTG # Questionable array : NO Score: 5.73 # Score Detail : 1:0, 2:3, 3:0, 4:0.84, 5:0, 6:0.25, 7:-0.36, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTCCCCGCGCCCGCGGGGGTAGCTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGTCCCCGCGCCCGCGGGGGTAGTTCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [33.3-36.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.78 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 5 84840-85478 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB892181.1 Streptomyces sp. PsTaAH-124 B086DRAFT_scaffold_30.31, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 84840 29 100.0 32 ............................. GGAACCTCCATCATGCCCTCCGTCGCCCTCTT 84901 29 100.0 32 ............................. GTCATCTTCTGGTCGGTCGGTGGAGCCATCAT 84962 29 100.0 32 ............................. GCCCATGACCGGAGGTCGACCGACATGGAGCA 85023 29 100.0 32 ............................. CCGAGCAGAGCGGCCGGAGCATCCGCGCCGTC 85084 29 96.6 32 ............................G GCACCCCGGAAAACGAGCCTTACACCTACTGG 85145 29 100.0 32 ............................. CCATTACCGGGGATGGATGCCGACCGCCCTGC 85206 29 96.6 32 ............................G ACCGCGAACGGCAAGCAGGACCCGAGCGACGC 85267 29 96.6 32 ............................T GCCTAGGTGTGGGCGTTCGGGGGTTGTGTGTC 85328 29 96.6 32 .................A........... ACCATCCGGATCTACGGCAACGCTGTCCGAGC 85389 29 100.0 32 ............................. GCAGCTGGCTCATCCCCGTAGACGACCTACTC 85450 29 96.6 0 ..................A.......... | ========== ====== ====== ====== ============================= ================================ ================== 11 29 98.5 32 GTCGTCCCCGCGCCCGCGGGGGTAGCTCC # Left flank : CTGTCGGACGAGGATCTCGGCGCCCTGTGGGACGACGGCGACACCGTCGTCAGCAGCGGTCGCAACTGGAGCGCCACAGACCACCTCGACCTCATCCCTCAACCCACCGACTTTGCCTCCCCGGAGACGAGCTCATGAGTACAGGGACGACCGTTGTCGTACTCATCGCAGCGCCCCCCGGGCTCCGAGGACACCTCACTCGGTGGTTTGTCGAAGTAGCCGCCGGCGTCTACGTCGGAAGCCCCAACCCACGTATCCGCGACAGCCTTTGGAACGTCCTCTCCGAGCGCATCCACGACGGCCAGGCCGTCATGATCGAACCATCGACGACAGAACAGGGCTGGTCCGTCCGAACCGCCGGCCGCGACCGATGGACTCCCGTCGACTTCGACGGACTTGTTCTCATGGCCCGCCCACGCCAGAACGGGCAACCCTGGCGACCCTCGAACGAGGTAAAGGAAAATGGCCTCATCACCTGACTAAGCCGCAGGTCACGAAGT # Right flank : CGCCACCACCGACGCCACCAACCCCAGACGCGCTGTCGTCCCGGGGCCGCAGGGGCGGAACTGGACCGGCTGGAGGGGCTGCTGGAGCTGCGGGGTTACGCGCCGCGGCTGCTGGCCGGCAGGCTGGCGGAGACGGTTGGCGAGGCGTTGGTCGAGCGCCCGTATCCGTGGCTGACCCGGCAGGGCCTGGTGCAGCGCCAGGCGTGAACGGACCGGCGGTGCGACGACGGGATCCGCCTGGACACCGGCCGCGAGTGCGAGATGTGCGGCAACGTGATCCACATCCGCCGCGCCCGGCGGGTGAAGGCCACAGAGCAGGTCGATCGGGAATTTCCTGGCCTGACGAAGGACGTGCGGCGCCGGGCCCTCGAGGAGCGGCTGCGCGAGCGGGTCGCCATCGAGGCGGAGGACCTCGCACGGCGCCAAGAGCAGGCCCGCGCGGAGCGCGCCCGGCGCGAGGCGGCCCGTACGGCAGCCGCTGAGCAGGCGGACCGCGAGCG # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTCCCCGCGCCCGCGGGGGTAGCTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGTCCCCGCGCCCGCGGGGGTAGTTCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [46.7-23.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //