Array 1 83220-89958 **** Predicted by CRISPRDetect 2.4 *** >NZ_MQUI01000007.1 Sphingomonas sp. Sph1(2015) NODE_7_length_135455_cov_49.9705, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 83220 29 100.0 32 ............................. GCCTGCATACCTGGCGATCGGCCGTAGATTTC 83281 29 96.6 32 ............................G ATCGTGCCCACCGTTAACCTGCGTGGCCTGAA 83342 29 100.0 32 ............................. ACGGTTCAGGTGGACCAGCTTACCGATGTTGA 83403 29 100.0 32 ............................. CCGAAGTCCCGCTTCATCCACGCGACGTTCTC 83464 29 100.0 32 ............................. ATGGCGGCGATCATCCTCGTCCCCGGAGAGCG 83525 29 100.0 32 ............................. AAAATCAACAGCGTTGAAGTCAGGACGCGTCG 83586 29 100.0 32 ............................. CAAGCGGCTGACTCAAAGGTGAGTTTGCCGTA 83647 29 100.0 32 ............................. TGCTCAAGGTGCTACAGGGCAGCAAACACCTA 83708 29 96.6 32 ............................T ATGTCCGAAAACATTTGGATTTTGAATTCGGC 83769 29 96.6 32 ............................T ATACTGGCGGTTGCCCTGGCTACTTTGCCCGA 83830 29 100.0 32 ............................. GATACCATCTGTCTTTGACCAATCATTCTTGG 83891 29 100.0 32 ............................. TCGTCGAACGTCGCATACCATGCCGTGACCGT 83952 29 100.0 32 ............................. CTGACGCGCATGGGCGTCGACAGTTTCAAGAG 84013 29 100.0 32 ............................. GATGTGGGAGTCGGCCAGAACCTGGGTGTCGC 84074 29 100.0 32 ............................. TGGACCTCTGGCCCCCACTTCTCGATATAGGC 84135 29 100.0 32 ............................. TACTTCTCGCACGGGCGCTGGACCAACGCGCC 84196 29 100.0 32 ............................. GACGCGGCGCGGTCCGTCATGCTCGCCTATGC 84257 29 100.0 32 ............................. GCGCTGGAAGGCAGTGGGAGCTGCGACCGCCG 84318 29 100.0 32 ............................. CATTCCCACCCGACCCCGGCAGACGCACCATC 84379 29 100.0 32 ............................. CCATTAGACGGGTCAGGCCACGACTTGCGTTG 84440 29 100.0 32 ............................. GCAAGATACGGGAACGCGACGCCGCCGACCGA 84501 29 100.0 32 ............................. TGCGCTGATTATTTCATAATTGGCATAGGGAG 84562 29 100.0 32 ............................. TGTCCATGTAAAGCATGGCCGCATCCAGCTGG 84623 29 100.0 32 ............................. CGCCGCCTGTTCGTGGATGCTCTTCAGGCTGT 84684 29 100.0 32 ............................. CAGGCTGAGGCCGACCGCGACATCCCCAAGCT 84745 29 100.0 32 ............................. GCGGCTCGGTGCCTCCCGCCGACCGGATGACG 84806 29 100.0 32 ............................. GAGACGTGAGCGGCGATGCTGTTCTGATCGCA 84867 29 100.0 32 ............................. CCTGCATTAATACGCCTCACAACGTCTCAATC 84928 29 100.0 32 ............................. TGCCATCGGACCCTGAGCGCGACGCGCTGCGC 84989 29 100.0 32 ............................. AGGCCCTGACTCAGGCGACCGGTGAAATGAAA 85050 29 100.0 32 ............................. GTTCCGCGCGCTCCCGTCGAGGCGGCGGAAGA 85111 29 100.0 32 ............................. TTGCACGGCACGACGCACGCGATCACGAAGCC 85172 29 100.0 32 ............................. CGTGGAAGCGATGGCTGGCGACGGACGGCGTT 85233 29 96.6 32 ............................G TTGCTCGGCGACGGCGAGCTGCGCGGGCAAGG 85294 29 100.0 32 ............................. GCGCCTGGGACTTGGCGAACACGGACATCCTT 85355 29 100.0 32 ............................. ACCTTGGACACGAGGGGCGCGAGCACGGTGAG 85416 29 100.0 32 ............................. GACTTCGGGACTGGCAGGAAGACCAGGCATTC 85477 29 100.0 32 ............................. CTGAAGGAATGAAGATGGCTAAGACCCTGGAG 85538 29 100.0 32 ............................. TTACGGATAGCGGCTTCCCGCGTGCCGGGCTT 85599 29 100.0 32 ............................. CATGTTGGAAATTCGGGAGCTAGTTAAGGCAT 85660 29 100.0 32 ............................. GTGCGCGGTTTCGTGCAGGACAGTGGCTTGGG 85721 29 100.0 32 ............................. CGTGACGTGACGTTGCCTGCCAGTGTGCAAGA 85782 29 100.0 32 ............................. CAGGTCCGCGCGCCATCCCCGCCGGTCAGCCA 85843 29 100.0 32 ............................. CAGCTAGTCTTGCCTTCGGACTGCGCGCCCTG 85904 29 100.0 32 ............................. AGGCCGGTGCCGGTTCGGGCGTTCTGGTGCGG 85965 29 100.0 32 ............................. AAAGTCAAAAGAGTCCTTCTTAATGAAGGCGT 86026 29 100.0 32 ............................. CTGATCGCAAACGCTAAGTGCGCCTTCGATTA 86087 29 100.0 32 ............................. AATCATCAAGATTGCCGAGCGCTGGGGGACCA 86148 29 100.0 32 ............................. GTCGCTAGGGAAGCGCGCAGGCTGGCCGAGGC 86209 29 100.0 32 ............................. TGGCTGGCTATCAGATTGACGGCAAGACCAGC 86270 29 100.0 32 ............................. CTATCTGGTATCCCTATCATATCCTACTCAAC 86331 29 100.0 32 ............................. TGGCAGAACTCTTCTGCGCAACGCCTTTGCCG 86392 29 100.0 32 ............................. CAACCCGACGTTGGGCCAGATCAGCCTGAACC 86453 29 100.0 32 ............................. CGCTCCACGCTGCTGGATATCTATGCGGCGAC 86514 29 96.6 32 ............................A TGGCCGCCGGAGCGTTCCCGCCTGCCACGCCG 86575 29 100.0 32 ............................. TTCGATCTGCCCTGTTCGGCCTGCTTGGCGTC 86636 29 100.0 32 ............................. GACTTAGCCGAGGGCGCGATCGATGACGGTCT 86697 29 100.0 32 ............................. GGGATCGACACCAGTGCAGCGCCGTAGGCCAA 86758 29 100.0 32 ............................. GACATCACCACCGTGACCCCGACGAGCTCCAA 86819 29 96.6 32 ............................G TACATGACACGCGCTACCCACACACGACAACG 86880 29 100.0 32 ............................. TTCAGGCGGCCGGTAGCCTTCATGGCGCCCGC 86941 29 100.0 32 ............................. GGCCTCGGCTGATCCGGGCCATGTGGTCGATC 87002 29 100.0 32 ............................. GCGCGGTCGCCGGGATAGCGGCGCTGCTGCCA 87063 29 96.6 32 ............................G ACGCTTCGTCACATGCCAGCCCCCGCCCCAGA 87124 29 96.6 32 ............................T TGGAATACCCGCGATCCGGCTGGGACCGGGTG 87185 29 96.6 32 ............................G TGAACCTTCGCTGTCTTGCCGTTGCTCTCGAC 87246 29 100.0 32 ............................. CGATGCCCGCCGCAAAGAGTCCGGCACCGCCA 87307 29 100.0 32 ............................. GATGCCCAGAATGACCGCGTTGTGAAACCGGG 87368 29 100.0 32 ............................. GACCTCGACCGGCCACCGGCACCCAAGGCGAT 87429 29 100.0 32 ............................. CGGCATCGTGGCCTGAGGTTCGCGACGGCGGG 87490 29 100.0 32 ............................. TCCATGACGCACGCTCCGCGGTTCGGGCCTTC 87551 29 100.0 32 ............................. CTTCCTGCACGATGGCGAAGCGGTAAATAGAA 87612 29 100.0 32 ............................. CATTCTGCTCTGCCCCGTCGGTATCGGGAGCG 87673 29 100.0 32 ............................. TGATGGGGTCGATCGCGCCTTCGCGCTGGGCT 87734 29 100.0 32 ............................. CCTGAAGTCAAAGGCCGATCGGTCTACCAGAC 87795 29 100.0 32 ............................. CCTGCGCAGAGAAGTCGTTCAGCCGGGAGGCG 87856 29 100.0 32 ............................. AGGAAGCGCATCACTTCCGCCCCTCCCCGTGC 87917 29 100.0 32 ............................. CCAGGGCTGGCCGATGTCGGCCCGGTCCTCGC 87978 29 100.0 32 ............................. ACGGAAACCGTCGCGATGGAGCGCAACGCGGT 88039 29 100.0 32 ............................. TTGACATCAAAAAGGTGGCGTATCTGCGCCGC 88100 29 100.0 32 ............................. CCTCTCGTCCAGGCAATTGCCGACACGGCGAC 88161 29 100.0 32 ............................. TTCGTGGTCAACCAGCCGATCTAGCAAGAATT 88222 29 100.0 32 ............................. GGATCAGCGTGCCCTCTGCGACGAGCTCGTCC 88283 29 100.0 32 ............................. TGCTGAACCTGAAGAATGCCACTGGTGAGATG 88344 29 100.0 32 ............................. TATATCCAGACCGGCGCGCCGCCCAGCGAAAT 88405 29 100.0 32 ............................. CCAGACGACAGACCATGCCCAGGCACGAACCC 88466 29 100.0 32 ............................. TGCGGGCGAACGCCAAGAAGCTGGAGGTTGAG 88527 29 100.0 32 ............................. CGGCCGTTCGGCAGCGCCCAAGGCGACGAGAT 88588 29 100.0 32 ............................. CAGCGTGGTGTGGGACTTCGTGATAATCAGGT 88649 29 100.0 32 ............................. AGGTCGGCGGTCATTAGAACGGCACGTCGTCG 88710 29 100.0 32 ............................. CAGCCCCGCGCGCCATCCCCGCCGGTCAGCCA 88771 29 100.0 32 ............................. TGCGCACGCGGGTTGCCACTATCGTCTTGATA 88832 29 100.0 32 ............................. AAGCTGACAGTCGGCAATCGTAATCTAACGTT 88893 29 100.0 32 ............................. TCCGCGCGATCCCCGCGACACACCCCGATGGC 88954 29 100.0 32 ............................. AGGCGCACCGCCGGAAGGCCCTGGAAATGGTC 89015 29 100.0 32 ............................. GCGGACAGCGCGCTTGCGGATCGCGCATCCAC 89076 29 100.0 32 ............................. AAAGCTAACCCCGGCGGGAACCTGGTATTCAA 89137 29 100.0 32 ............................. GCCCAAGGCCGCACCGCTGGAGACTTCATCTC 89198 29 100.0 32 ............................. TGGCGGTCGCAGGCGTTCAGGACTTCCCAGAC 89259 29 96.6 32 ............................G CAAGTTCATGTCCGAATACCAGCCCGCGCAGG 89320 29 100.0 32 ............................. ATCAAGGATGGCGTCGGCGATCAGGCGCCAGA 89381 29 96.6 32 ............................A TCCGCGACCAGACGCCGGATGTCCCGCGCAGC 89442 29 100.0 32 ............................. CTTCCTTACGAGGAATGGGCCGCAGAGTTTCT 89503 29 100.0 32 ............................. CTGCATCGAGAATGCAGAGATCGCTTATGAGG 89564 29 100.0 32 ............................. CGACATCCGAAGCCACCCATCTTTCTGGATTG 89625 29 96.6 32 ............................A TGCGGCCCATGGTGTGGGGCAGGCCGTAAAGG 89686 29 100.0 32 ............................. TTCACTGTCCAGCAATGGCCTCATAGCCCGGA 89747 29 100.0 32 ............................. TTGCCTCTGAATGGCAAGTAATGGTCAACGCC 89808 29 100.0 32 ............................. CTTGCTTCCGGCGACTGACGACACGCTGCGTC 89869 29 100.0 32 ............................. TGGTGCCGGAACCCGTGTTCGTGCCGGTGCAG 89930 29 79.3 0 ..................CC..CCT..A. | ========== ====== ====== ====== ============================= ================================ ================== 111 29 99.4 32 GGTTCCCCCGCACCCGCGGGGATGGTCCC # Left flank : CGCAGCGTGATCCCCGGCATGATCGACCGGATCAAGACGCTCTTGATGCCCGGTGGCGGAGAGGATGCGGGCGTGGCACCGGGTGGCGGCACGCCGTCGCCGGTGGAGGCCTGATGCCGCTGACCATGGTCATCACCCGCGACGTCGAGGATCGCTATCGCGGCTTCCTGGGCTCGGCGATGCTGGAACTGGCCCCCGGCGTCTATGCCCAGCCGCGCATGAGCGCGGGCGTGCGCACCCGTATATGGACCGTCGTCGAGGAATGGCACACCCGCCTGCGCCGCGGCAGCATCGTGATGTGCTGGGCCGAATCCGCCGCCGCCGGGGGCCTGGGGCTGCTGACCCTGGGCGAGCCGCCCAAGGACGTGGTGTCGCATGAAGGCGTCCTCCTGGTGCGCCGCGCTCTGTCCTCCCGCATCCCTGTCAAGCCGACGCCATAACCGTTCGCACGACAGGGGGTCTTTGACATTGTGAACGAAATCAGCGATCTGCCAGGCAGA # Right flank : CGGTCGCGCGCCAGGAAAAACCCTCACATGCCTCGGCACCCAAATATCGACCGGCCAGCGGTTGGCGGCCGCCGCTCCTCACTGCCACCCAACCAGTATGCGCACCGATGGATATTCTCCCGCCGCCCTGGTCCATGCCTTTTACAAGGCTCGGCAGGACCGTGATCCGGAGGCACTCCGCTCATGGCTTGCTGATGACGTATGCTGGAACGAACCAGTCGTCGGCGACCATATGGGGTGCCTTCGGGGAGCCGATGCCGTCGTCGACATGCTCAAGCGTGCGCTTGCGGCCACCGATGGCACCTTTTCCTTGCGGGTTGCCAGTGTCGTCGAAACCCAAAGCCACTGCGCTGCCGTGATCGAGTGGAGCGCGGACAAGAACGGGAAAACCATCCAGGGACAGGACATGGCCGTCTTTGGTTTCAAGGGCGGAAGTATTGCCGAAGCGTCCTTCTTCGCATCCGATATCACCAACGACCAGGCGTTCCGGGAGAGTTGAT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGTTCCCCCGCACCCGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCCCCGCACCCGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [45.0-35.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //