Array 1 30400-32201 **** Predicted by CRISPRDetect 2.4 *** >NZ_LUHI01000018.1 Anabaena sp. CA = ATCC 33047 contig022, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== =========================================== ================== 30400 37 100.0 34 ..................................... ATAGTAAAGGCTAAAAATCCATTGCAGACATTAC 30471 37 100.0 33 ..................................... GTTCCGGTGGTATTGCGACAAGAAGCCTTGGCA 30541 37 100.0 33 ..................................... ATTATGACCTATCTATTGAAGAGAAGCTTCTTG 30611 37 100.0 38 ..................................... CCCTGGAATTTAACCCGATAGTTCAACCAATCGCCCAA 30686 37 100.0 34 ..................................... GGAAGACTTACCCAGGCAATTCAACCCAGAATTA 30757 37 100.0 34 ..................................... CAGTTTGATTACCTGCATCAATAGCGTCTAACCT 30828 37 100.0 34 ..................................... AGATACAACGGGAAAATTGAGCTTCGGACTGGTA 30899 37 100.0 43 ..................................... GTAAGGCTTTGAGGCATTCTTACAAATATTACAAACTCTTCAA 30979 37 100.0 41 ..................................... TAGAATACATTGAGTCAGCAGTAGTCTCACGTATAGGAAAC 31057 37 100.0 34 ..................................... GATATATCGCACCTTCACTAATTGGAGTATTCCA 31128 37 100.0 37 ..................................... GTAAACTCCTAAACCAAACTTACCAATGGCAGCAGTA 31202 37 100.0 38 ..................................... TGTGTGTACTTCCTTGCCTGATACGCTGTAACTCTTCC 31277 37 100.0 43 ..................................... GCAAGCTACAGATAGGATTGATATTTGGTGCGACATCTTAAGA 31357 37 100.0 33 ..................................... ATTAGTCGCTGTAAAAGCCTGGTTAAAAATATA 31427 37 100.0 32 ..................................... TCATAGTTTGGAAGAATTGGCTTTAATGAGCC 31496 37 100.0 37 ..................................... TGAACCCAGACTTTTTTGCCCTTGCTCCAATTGTCGC 31570 37 100.0 34 ..................................... TTTTACTGTAAAGAGGTAATGTGTTCAAGGGTTC 31641 37 100.0 39 ..................................... TCTTCTGGTTTTCGGGGGGATGAAGGGGTGGTGGCTGAA 31717 37 100.0 42 ..................................... GTGTAACTTCTCTTCAACAGCAAGCTAAAGAAAAATATTGCG 31796 37 100.0 33 ..................................... TTACCCCCCCGTGTACATACGATAGATTTAAGC 31866 37 100.0 42 ..................................... TGATTGACCTTTGATTTTAATTCCTCTATTTGAATAGATAGA 31945 37 100.0 33 ..................................... TTCATTTTCATGAAAATCAGCATTTCCAGTGCT 32015 37 100.0 35 ..................................... GAATGGCGATACTCGTGGACAAGTAGGAAGCGCGT 32087 37 100.0 41 ..................................... CCGTATCTCGTAGCCGTAGTAATTAGCTAATGCCTCTAAGT 32165 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== =========================================== ================== 25 37 100.0 37 GTTGAAATTTCAACTAATCCCTATTAGGGATTGAAAC # Left flank : AACTAATGTGGTTATATCCTACGACATCCCAGAGGACAACCGCCGCACTAAAATTCACAAAATCCTCAAATCCTATGGGCAGTGGGTACAGTATAGTGTGTTTGAGTGCCAGCTTACTGATACTGAATACGCCAAATTGCGATCGCGTCTCCACAAATTGATTAAACCAGACACCGACAGCATCCGCTTTTACTTTCTTTGTGCTTGCTGCTTTGGTAAGATTGAACGCATAGGTGGCGAACAACCCCGCGACGAAACCATTTTCTTCGCCTAACGCGCGGATGGGTAGGTGTACAAAATCGCTTTTCAGGAAAAATGGCTGTATCCCTTACACTACAGGCTTTTGCGAAAAAATTAATTTAAAACCATCCGCGCACCTTACCCAGTAATGGTTTCAGCTATTTCACTCAAATCAACTGACATTTTCTCGTGTTATAATTGACCCATCCGCGAATCTGAACCTTGAAAACCTTATACAGTTTAGCTTTCGGGCTTCCGCA # Right flank : CGCGATTCCAATGGTGAACCTGTAGATTATAGGGTTGAAATTTGAACTAATCTTTGCGCCTTTGCGCCTTTGCGCGAAACAAATTCATAATTCAAATCAGCAACACCAGAGAATCAATAACGACAAAAAAATAAAACCCCTGGTTGTGCTAACCAGGGGGAGAAGGTTTCGCTGAGATAAGTCAAGACAACTACAAGATGACTGAAAACAATTCCTGAAAACAGATAAAAAAATCCTGCTAGTAGTCAGTTAACTGTGTTTGAGCAAATTACGCACAGCTTGCTCAATATCAGATTCTTTCATCAGAGACTCACCTATCAACACAGCATTTACACCAGCCTCAGCCACTAAAGATAAATCAGCGCGAGCATACAAACCCGATTCCGCGACTACCATCACGCCCAAATCTTGTAACTGCGATCGCCTAGCCGCTAGCAGAGTTGGAGTAATGCTAATATCAATACTACAGTCTGCTAAACTTTGGTTATTAATGCAGATTA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAAATTTCAACTAATCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.20,-7.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [51.7-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.37 Confidence: HIGH] # Array family : NA // Array 1 260286-260967 **** Predicted by CRISPRDetect 2.4 *** >NZ_LUHI01000003.1 Anabaena sp. CA = ATCC 33047 contig003, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 260286 37 100.0 34 ..................................... TCTAGATCCGCCATAGTAAATATTTTCTCGTTTA 260357 37 100.0 35 ..................................... TAAATAACATTGTGGGATCTAACCCTGCCACTGGT 260429 37 100.0 34 ..................................... GCTGAAGAACCACTGTATTAACTCTGCACGTTGC 260500 37 100.0 33 ..................................... GATACAGCAAATAGAATTGTTTTTCTTCTAATG 260570 37 100.0 36 ..................................... ATTGATACGAACAACTACTGACCGATTATTAGTCAA 260643 37 100.0 33 ..................................... CTGTGAGTAATTGCTTTAAGTTCATGTCCTTTT 260713 37 100.0 35 ..................................... GCTTGCGGCTTCTTCTGGAGACTTGCCAAAAGCAA 260785 37 100.0 39 ..................................... GAGCATTTGGTTGTAATGCTCATTTTCCTCAGTGGGCTT 260861 37 100.0 33 ..................................... AAATACGCATAAAAAAAAGGGCTTATACAGCCC 260931 37 75.7 0 ..........................ACCCAA.TTG. | ========== ====== ====== ====== ===================================== ======================================= ================== 10 37 97.6 35 GTTGAAATTTCATCTAATCCCTATTAGGGATTGAAAC # Left flank : TTCTGTGTTAAAGACTATGTTGCAGGTGGCGAAGGTGGAGGAGTCGATTAAGGATGTTTGAATTTTCGACCTAACAGAATATATATGCGCCGACTGACTGATTGTGATCAATGGAGTCGATTAAGGATGTTTGAATTTTCGACCTAACCCCCTGGAATATGTAGAGACGTTTCATGAAACGTCTCTACAATTTAGGGGAGTGGGACTATGGTAGAATTTGAGGCTGTCTAAACATTCTCTTGGGGACTGGGGATTGGGTAAAAATTGTGTTGAATGCGCGGATGGGTAGGTGTACAAAATTGGGGTTTGGCAATAATGGCTGTATTCCTTATGGGGCGGGCTTTTGCAGAAAAATTAATTTAAAACCATCCGCGCACCTTACACAGCAAGGGTTTCAGCGATTTTGCTTAAATCAACTGACATTTTCTCGTGTTATAATAGACCCATCCGCGAATCTGAACCTTGAAAACCTTATATTTATTAGCTTTCCGGCTGCCGCA # Right flank : TAGTTAGTCTCAAAGAGAGATGACATAAAGGTAGAGAAACAAGA # Questionable array : NO Score: 9.14 # Score Detail : 1:0, 2:3, 3:3, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAAATTTCATCTAATCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.20,-7.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [53.3-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.37 Confidence: HIGH] # Array family : NA // Array 1 10409-12430 **** Predicted by CRISPRDetect 2.4 *** >NZ_LUHI01000027.1 Anabaena sp. CA = ATCC 33047 contig047, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== =========================================== ================== 10409 37 100.0 40 ..................................... GCCTGAAGTAGATATACTTTGAAGTTTCCAAGTAGGTAAA 10486 37 100.0 32 ..................................... ATAAGCTGATAGTCTTGCTGTGATTGAGTCAG 10555 37 100.0 34 ..................................... TACGGATGGTAAAAGCGGTAAGGACTTCCGAAAG 10626 37 100.0 39 ..................................... CTCTCTTTTATATTCTTTGCACCCTCTCAAAAAGGTGCC 10702 37 100.0 36 ..................................... AGGTGATACTCGTGGGCAAGTAGGTAGTGCCCTGAG 10775 37 100.0 42 ..................................... AACACCAACGTTACAGCCTATTTGACTCCATCAGAAAGGGAA 10854 37 100.0 33 ..................................... TTAAAGCCCCCATAAACAACACATCTTTGTTGA 10924 37 100.0 43 ..................................... CTTATGCCCTGCATCCCAGTTGAAGTCTGGGAGACCGCCTAGC 11004 37 100.0 37 ..................................... CTTGTTATTAGAGTGTTAGCTTTTGTCTTTTTTTCAG 11078 37 100.0 36 ..................................... GGATAGATACCATCTTACCTTTAATTTAACGATATC 11151 37 100.0 34 ..................................... TTGAAATAACCTCAAACACCGCAACAGAATCTTC 11222 37 100.0 40 ..................................... TCAGAAGTCTACGCCATCATCGAAGCCTTGAAAAATGAGC 11299 37 100.0 34 ..................................... TATTTTCATCAGAGAGGATGCCAGTAAAATTCTG 11370 37 100.0 37 ..................................... TGGTAAATCCATCAGGATTCCTCCTTGAGCCAGCTAA 11444 37 100.0 36 ..................................... GTGGCTGTCCCGGTTGGGGTGCTGGCCCTAGTAAAT 11517 37 100.0 35 ..................................... ATTACTAAAATAAGCTTTTAAATTACTAGCCTTAA 11589 37 100.0 35 ..................................... TTTAACTATGATGGTAAATGCTTCATCTGTAGGAA 11661 37 100.0 38 ..................................... TAATTGCGATCGCTGCTTGTTGGGGACAGACTGCGCGG 11736 37 100.0 40 ..................................... TACAACCGTGATAATGACTTTGGATTTTTCAGTTTGAATT 11813 37 100.0 36 ..................................... TCTTTTCCCTTCTTATTTCCTTATGCTTACCTATCC 11886 37 100.0 34 ..................................... AATTATACTACAATCCACAACCGTACAGAATTGT 11957 37 100.0 34 ..................................... TTCTGCGAAACCGTGCCGAGCAACCCGGTAGACC 12028 37 100.0 39 ..................................... AAATGGGATTCAAGCGCAATCAGGCGGGGATAAACGAAC 12104 37 100.0 38 ..................................... AGAGAAATTCTGCAAAATAAAACCCTGGGATGAAGAAG 12179 37 100.0 35 ..................................... CGTTCATGAATGCTGCTAAATCAGCGTCAGTAGCA 12251 37 100.0 35 ..................................... TTGATTAACCCACTTAAACACTTCCGCTAAGTTGC 12323 37 100.0 34 ..................................... AGACATTACATCCATGCTCCCGCTTTGTAAATTT 12394 37 75.7 0 ..........................ACCCAA.TTG. | ========== ====== ====== ====== ===================================== =========================================== ================== 28 37 99.1 37 GTTGCAACATTAACTAATCCCTATTAGGGATTGAAAC # Left flank : TCCGTAAAGTCGCCCATTCCCAGCTTTACGTCGGTCGTAGTGGTCATGGTGTAGAAAAGCAGCTATCATACTCTTGTGTGCGTATTGATGTAAAAGATGGCAATCCACCTAAGTTTATTGTCAGACCTTTGGTAGCGGAACGGGTGGGGGATGAGTGGTTTGAGCGGGAGTTGGATAAGATTGTGATTTAGTAAGCTGTTGATGAGCGCAGTTTTACGCTTATGAGTGATTTAGAGGCTGAAAAGCTTGTGACGCAAGGATTTTTTAGACTGACTGCGCGGAGGGGTAGGTGTACAAAATTGTGTTTGGGGAAAAATGGCTGTATTCCTTATTCCGTCAGCTTTTGCAGATTTTTTTAAAAAAAACCACCCGCGCACCTTGCCCTGTCTGGGTTTCAGCGATTTTGCCCTCTTGCCAGTCACTTTTCTCGTGCTATGATAGACCCATCCGCGAATCTGAACCTTGAAAACCTTATATACATTGGCTTTCGGGCTGCCGCA # Right flank : CTAGTTATCAAAAAGCACCTTGTTTTAAGTAAAAAATCTAATTTTTAGGTATTTTAAAATACTTAAAGATTAAATTTTAGCATCAAAGAAATACAGTTTAGGGGTACTAACTAGCAACTTACGTTATTAGGGATTGAAACAGGTATCTTTTATCAATTCCAAACTGTATTAAGTAGGTCAACATTAGACCTCTTGCATAAATATTTTTCTGCCTCACACAAAGGCGCAAAGACGCAAAGAAAGACGCTAGAATCATGACTTTTGCAAGAGGTCTATTGAAAAAGGTAAAATAGAGTCTTTGCGATTGCTTCGCTTCACTGCGTTCCGCTCGTAATGACATTTCACATTTAATTAGGTTGAGCTACTTATTTGCTTGGAGTTGCAACATTAACTAATCCCTATTTTCATATCTTGCACCTTTCTCAATAAGCGTCAGCCGATGCACTGCCAATGACGCAAAACTAAGGCTTTCAGGAAGTTGCAAGCAATGCCCACCCTAC # Questionable array : NO Score: 9.21 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCAACATTAACTAATCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.20,-7.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [50.0-81.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.64 Confidence: HIGH] # Array family : NA // Array 1 120050-119730 **** Predicted by CRISPRDetect 2.4 *** >NZ_LUHI01000035.1 Anabaena sp. CA = ATCC 33047 contig063, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ==================================== ================== 120049 36 100.0 35 .................................... TGATTAACCTGAAGGCTTGCTCCGGGATGTTGTAG 119978 36 100.0 36 .................................... CACCGGTACCGCGAGTAGTCGCACCAATATTCATAT 119906 36 100.0 35 .................................... TTGAATGCGAAGTTATCGGCAGATGTTTTGTTGTT 119835 36 97.2 35 .........................A.......... TGACCATTGGTGTATCCATCAATCCTGACTGCTGC 119764 35 88.9 0 ..............................-.T.TA | ========== ====== ====== ====== ==================================== ==================================== ================== 5 36 97.2 36 GTGCTTTAACATTAGATGTCGTTAGGCGTTGAGCAG # Left flank : TAGGTGAAAGTCGGGATTTAGTGAATGATGTTAGCCTGTTACCTGAAAATTACTATGCAGAATCAATGCGATGGTTAATTCGAGATGATTATGGGTTACTAACCTTACCTTATTGGGTAGATCATGTAGGTTCACGGGGAACGCGATGGCTGTGTTACGAAATTCAGGAATTTCAAGTATTTCAACCACCCGAATTATCTTGGACTTCAATTCAAAGTGATTAGAGGGCATTATTTACTTTTGCAAGCATCTTTGCTTGGGCAATTTAAATACCACAATAAATAATCTTGTCTTCTTGTTTCACAAGCATTTTAGGGATTTCATATACTTTCAATGTGCTTGCAATTTCCTGGAACACCTTCAAAACAAGGGTTAGAGCTTTAGCAACTTTGCTTTTGCTATGAATAGCTATTAATTTTTGCAACTTGACTAATCCTAATTGGAAGGTGCTTGTAAAATTAGTACAGAGCTTTGGCTAGTCAACAGGTTTGATGATCGCC # Right flank : CTTTTGATACAAATACTTTTGAAATACATACAAAACTAGCTCTGCCAAATATCTCCTTTTCAAGACATTTTTGCGATTATTTTTTCCCACTGCTCAATCTGGTTCTGTAGTTGTAATTGCCGATCGCCCAAATCTTGACTATCATCAACAGACAAATCCTGACCGCTCAATCGCTCACGATAGAGAGCAATCAGTTCGGTTAGGGCTTTTTTATTGCTTGCTGATCCTCCTGGGTCAGAGAACTAACATTGACTGGAATCAACTTTCTGCCAATTCTCTCTACAAACTCAGACCGACTTAAATCCATACTGTCGGCGATCGCATCTAATCCATCAATCCCGGTAGGAGTTAGGGCTAGGTTAACTCGTTTCTTCACCTCATCGTACAGTTCTGGTACGTCTTTTTGACCTTTTTGCCCTTTCTTACCCATTGCCGTCTAGTTTTTGCTTTCCTCCCAATCATAGTAAACACATTTAGCACTTAAGTTAAACATTAAAATT # Questionable array : NO Score: 2.92 # Score Detail : 1:0, 2:0, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTTTAACATTAGATGTCGTTAGGCGTTGAGCAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.10,-4.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.78 Confidence: MEDIUM] # Array family : NA // Array 1 128471-130563 **** Predicted by CRISPRDetect 2.4 *** >NZ_LUHI01000044.1 Anabaena sp. CA = ATCC 33047 contig081, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== =========================================== ================== 128471 37 100.0 41 ..................................... GCTTAGAAATAATTATGTATTCATTATAACACGACTCAGGG 128549 37 100.0 37 ..................................... TACCGAATTTCCGTTTTTTGCTGGAGAAACACGATAT 128623 37 100.0 40 ..................................... CGCAGATACTTCTTTTGTTGTGTAAAAAACTCTAATCCAA 128700 37 100.0 33 ..................................... GAAACATTCGCCAGAACCATCCCGGTTACACCA 128770 37 100.0 35 ..................................... ACCTGTGGATGGAAGGACGGAAGATACATCATCGA 128842 37 100.0 35 ..................................... AGGATTTATAGTCGCAGTGGAATTACCCGCGTAAT 128914 37 100.0 34 ..................................... AGATTTAATCCCATCTCTGGAATACAGAACTCAA 128985 37 100.0 41 ..................................... TGGGAAGGCATTGTAATCAATGCCTTAGGGATAGATATAGT 129063 37 100.0 35 ..................................... CCGTGATAGTAGCAATTGCCTGTAAGGTCTATGAG 129135 37 100.0 34 ..................................... TAGCACTATACGCTGATAATCGTACATCAGTAAA 129206 37 100.0 40 ..................................... AACTTTTTGGCAAAATGATAGATTTACCGATAAGTTTACC 129283 37 100.0 42 ..................................... GCCAACTCAAACCTTACCAAGCTGTGTAAATGGTAGTTTCAG 129362 37 100.0 34 ..................................... GTCTCCAGCAAGACTCCTAGCGAATAATGAATTG 129433 37 100.0 40 ..................................... TTCTGTCCCATCGATATCTGGGAAAACTTGTACGACCAAG 129510 37 100.0 35 ..................................... AAAAACAACCCACGCACGGAAACGTGATCATCTAT 129582 37 100.0 33 ..................................... GCGTATACCTCGAAATACAGCCATTAACTTGGG 129652 37 100.0 34 ..................................... GAATACTATGATTCTTAATAGACTCTAGTTCATT 129723 37 100.0 43 ..................................... ATGACTTGACTGTTTACCCTTGCGGCTGCTTTGACTCAACCGT 129803 37 100.0 34 ..................................... CCAAACAAAAAATCCCAGGAACGTTGCCGGAACG 129874 37 100.0 34 ..................................... ATCGCACCACTAGCGATCGCCTCTCTCTTCACTT 129945 37 100.0 35 ..................................... ACGGATTCATCGCTAGCCCTTACGGTGCGGGCGAT 130017 37 100.0 35 ..................................... TGCTAGGTGAGGGTGTCTCTCCTTAAAATCCTGAA 130089 37 100.0 35 ..................................... GAATTTGGATGTGAGCTAGTATTTTCCAAATCGGA 130161 37 100.0 35 ..................................... TTCAAGGTATTTGTACAGGCAGCCTTTTTGTTTAC 130233 37 100.0 34 ..................................... GCCTACTCGGATAGTAGGATGCACGGATAAAATG 130304 37 100.0 37 ..................................... CTGAAATTAATGCCTCTATTGGCTTTATATTCTTCGC 130378 37 100.0 34 ..................................... TTATAAGATTTCGCCCGTCCCAATCGTAGCCCTC 130449 37 100.0 38 ..................................... GATAAACAGAATTTCCAAACTAACTTATTTCCTATCTT 130524 37 91.9 0 ........................T...T.......A | A,TG [130551,130555] ========== ====== ====== ====== ===================================== =========================================== ================== 29 37 99.7 36 GTTGAAATTAACAATAATCCCTATCAGGGATTGAAAC # Left flank : GACGGTGCGGCTTTATTACTAGGGTTACAGTCAATAATGGCTGTATCTTCTGGTTCAGCTTGTTCATCAACTAAAACAGCACCTTCTCATGTACTAACAGCTTTGGGACACTCAGAAAAACTTGCTTATGCTTCTATTCGGTTTGGCATAGGACGGTTTAATACTCAAGCCGAAATTGATTTAGTCGCCAAACACGCGATCGCCACCATTGAGAGTTTACAATCAATTACAGTGAGTTAGCGATCGCTCCCCTTTGACCATTTTCCTTACCTGATGCGCGGATGGGTAGGTGTTGAAAATCGCTCCTCAGCAAAAATCGCTGTATCCCTTACACCATAGGCTTTTGCAGAAAAATTAATTTGAAACCATCCGCGCACCTTACCCAGTAAGGGTTTCAGCTATTTTAGTCAAATCAACTGACATTTTCTCGTGTTATGATAGACCCATCCGCGAATCTGAACCTTGAAAACCTCATATACATTAGCTTTCGGGCTGCCGCA # Right flank : AAGTATTGTTATTAACAGCAAAGTCTCTCAAACCTAACCCCCCCAGCCCCCCTTCCCTACAAGGGAATGGGGGTGTAAAAAAGCCTCTCTCCTTGTAGGGGAGAGGTTTGGAGAGGGGTTTTTATTATGCTGATTGATTGGAAAAACATCATCTCAGCAATCAATAAGGATCATAATCAAACCTACCCCGCTTGACGCTGCGGAAATAATAACCCCTAGTGGGTAGATTATTTAAATCGAAAGTATCACCACTGGGAAAACGCCAAATTTTGTAGTCGTAATAAGTCAATGGGGTTCCGGGTTTGCAGACTTCTGGCGGATGATCTCCTAAAACCAAATACGCCGCATTTCTCCCCATGACTTTGGCAATACCATATTTATCGACAACTATTGATGTTTCTTCACTAATCGCAATACCTAAAGCAGTTTGACAAACACCGTCTTGAATTTGTCGGGCAATAAAGGCCATAATTCGCCCCATGCGTTTGCGAGTGTCAAAA # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAAATTAACAATAATCCCTATCAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.20,-7.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [50.0-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.37 Confidence: HIGH] # Array family : NA // Array 1 250109-252379 **** Predicted by CRISPRDetect 2.4 *** >NZ_LUHI01000056.1 Anabaena sp. CA = ATCC 33047 contig110, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ==================================================== ================== 250109 37 100.0 37 ..................................... CGCGTTTATCAGGATGATAAATTTGTAAGTATTCGTT 250183 37 100.0 37 ..................................... TGCACTTTTAGATTTTGTGTTATCTGACGACATACTC 250257 37 100.0 32 ..................................... TTTGTGAATAGGAGTTCCCCAGGTGTAGTATC 250326 37 100.0 44 ..................................... ACAAACAAAGGGAACCTAACCGCAGTGGTATGAAGTTAAGTTTT 250407 37 100.0 41 ..................................... CAATACTTAGTGAGTGCATGACAGAACTCTATTCTGCTTGC 250485 37 100.0 41 ..................................... TTAGACCTATACCATCTGCATAGTCTAGTTTGAAAAACACA 250563 37 100.0 43 ..................................... TCCCACCATCATCATTTAAACCCGCCAAAGCGATTCCTGGGAG 250643 37 100.0 39 ..................................... CTACGTATTAATACATAGAAATCTTGTACATTTTCTGGA 250719 37 100.0 37 ..................................... AGAGAGATACTCATCTTTTGTTAACTTTGTTTGAAGA 250793 37 100.0 45 ..................................... TGGACAGTCAACGTCACTTATTACGGGAATACCTTGAACGGCATA 250875 37 100.0 34 ..................................... GTATTTCTACATAGCCCATACCATAATCAATGAA 250946 37 100.0 45 ..................................... TTATACCACTTTACATTAATGAATTTGACTGCAATCCATTTCCAG 251028 37 100.0 43 ..................................... TTCTACCCAATTAGCTGAACATATAAGTATTCTTTTTATAATT 251108 37 100.0 41 ..................................... TTGAGGTACTTAAACTCAATAGACACCTAGAGCCTATACTT 251186 37 100.0 45 ..................................... TTAATCAGCTACCCAACAATTTTCAGGTAAGTTATTTAGTAACCA 251268 37 100.0 36 ..................................... GTAAAGGTAGCTGCCCCGTCCGATGATGAATTATGA 251341 37 100.0 40 ..................................... GCTTATTGAAGCTAGCTTTGAAGTTGTCAACTCCTTGCAT 251418 37 100.0 36 ..................................... CTTGCTTGTTGTTGCATACTCTGGCTTCCATTCTTT 251491 37 100.0 36 ..................................... ATTAACACCCCAAGAGAATATCTCATAGCATTCCCA 251564 37 100.0 45 ..................................... GCAAAGCATGAGGACCATTGGCTTTATCTCCTAGACTTTCTACTA 251646 37 100.0 43 ..................................... GGAATTTTAAAATACCTTTTGAGTTTACTGTTAAACCAACTAA 251726 37 100.0 52 ..................................... TTAACCAAAGTAATCTTTAGTTGGTATACCTATAGGTATAGAATACCTACTA 251815 37 100.0 36 ..................................... CATTTTCTGTGAACCCTATAGAAGTAGACAATATAC 251888 37 100.0 35 ..................................... AAGTAGCAGCTTATAATCCACCTACTCTTTCTTAT 251960 37 100.0 39 ..................................... TTTCCAAACTACCATACTCATAGCTAGAGATAGAGTAAG 252036 37 100.0 43 ..................................... CTTCAACTACAATGTACTTGCCTCCTTTGTGCATGAAGACAGA 252116 37 100.0 39 ..................................... AAATTAACTTTCTCCACTCTTTTAAAGCCTTACCCAAAG 252192 37 100.0 39 ..................................... CCGCCATAAATGGATGGGCATCATAGCCCTCAATCCAAA 252268 37 100.0 38 ..................................... ACAGCTAACTTAGGTTCACTCAGCTTATTTTGTTCAGA 252343 37 97.3 0 ....................................A | ========== ====== ====== ====== ===================================== ==================================================== ================== 30 37 99.9 40 GTTAAACACCACCTATTCCCCGCAAGGGGACGGAAAC # Left flank : TGGATGAGTCTACTTTGAGTTCTCTGTTAGAGAAGCGTTGGCTACCCATATTGAAATTGAATGAAGACAGTTTGAGAATTTATCCCCTTGATGCAACAGCAAAACAGGAAACACGAGTTTATGGAAGTCAGCCTCCTTACGAACCGCCGGATTATTTAATTTTGTAAAGCTTAATGTCGCATTTCTAGTAGCAATTTACAGCCTGAAGTTGATGATTTTGCTTGTGTTTGGCTATTTGTAACGGAATGTAAACTTAGCCGCTAATTTGTCGCGGCGAGTTATGAAGATTATGGAAAAGTAAACTTGTGTTAATAAAAGAAAAGTTAGGTTTTTCACCTTGACTACTTCAGCTTTTTCGTTTATATTACCTATAAAGCTGAATTTTAACGAAAGCAGCTTAAAAATTTGAGTACGGATACTTTAAGTCACATTGTCTTATCCGTAGCTCGGCGCAACTGAACCTTGAAAACCAAATACATCAATAGTTTCCACAGGGTAGG # Right flank : AAATGGGTGACGGTAGTTACCGTCAAAGTTAGTTATTCCAGGGGAGGCGGATTTATGATGATGTCTGCTGCTGATAATGTTGTGAGATTAAATGCTCTCCATTGACGGGTGACATACTTGAATCGCCCAATACCAAAGTCTCTATTAGTAGTGAAATTATCCCATCGAGAACGCATGGACGACCAGTAGTCACCACCAATCGAGAGTAAATACCGAGCGCGATCGCGATCATCTGGTTTAGATAGGTCATCAATAATCAGTCTAGCTTGTGCTGTCGCTAGTAATCCAATTGTATTTTCTGGATCAAATTCCACTCTTTTGTGATTCCAAAAATGGAAGTTATATCCATTACCGGCTTTTGTGGAAATACTTCCATCAGGTTCAACTCGGATGTCTGCGGGGATGTTAATATCGCGTTTGAAGTCCTCTCGATATGCTCTTCCGCGAACTCTGAGAGAACTAACCAATAAATGCCATTTATAATCAGATTTACTCAAAGC # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:-0.00, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAAACACCACCTATTCCCCGCAAGGGGACGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [12,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-9.20,-8.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [53.3-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.15,0 Confidence: HIGH] # Array family : NA // Array 1 1094-45 **** Predicted by CRISPRDetect 2.4 *** >NZ_LUHI01000073.1 Anabaena sp. CA = ATCC 33047 contig155, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================= ================== 1093 37 100.0 35 ..................................... GGTACGAATTAGTTATTTCTTTACCCGATGAAGTC 1021 37 100.0 34 ..................................... TGGTTGACTTATCCGCACACGGCAACAGCAAAGA 950 37 100.0 36 ..................................... TGCATTGCTGCAAAATTATCTATTGCATCAACACAA 877 37 100.0 33 ..................................... CACATTGATTGAAGTACAAATTCACGAGATTTC 807 37 100.0 36 ..................................... AAGATACTCCCCGATTTTGAATTAAAAGTTAATCCC 734 37 100.0 38 ..................................... GCAAATCATTGAGCCACCATTTTGATTCATCCTCTATA 659 37 100.0 36 ..................................... ATTAGGTTTATTCAGGATGACATTTACACCTACCGG 586 37 100.0 34 ..................................... TTTTGGGTATGACAACAAAGTGGTAGTTTAGCAA 515 37 100.0 36 ..................................... TCCTCATAGTATGAGAATAAATCTAAATCATCTTCA 442 37 100.0 41 ..................................... GGAAATCTTGGGAATATTCAGATGAAATTGAGACTTTAAAA 364 37 100.0 32 ..................................... ATCAGTGGCGAAATTTATCCTTGCAGATTAAT 295 37 100.0 34 ..................................... ATTTCTACAGTAATTTGAGTGCCTTTGGCTGTGA 224 37 100.0 33 ..................................... TTACTACAACCCAACACTAGACAGTTATTACAG 154 37 100.0 36 ..................................... ACTATGGTAGTTAGCGGTGCAAAACTTTTGAGTAGT 81 37 75.7 0 ..........................ACCCAA.TTG. | ========== ====== ====== ====== ===================================== ========================================= ================== 15 37 98.4 35 GTTGAAACATTAACTAATCCCTATTAGGGATTGAAAC # Left flank : TAGCATTGGTGAACAACTGTGGTTATCCCTCACCCCAGACAAACTGCACTTTTTCGATCCAGACACCGAGTTAGCGATTTTTCCCTAGTTGGTATTGTTGACTGGAGACAAATAAATTCAACAGTCAACAGTCAACAGTCAACAGTCAACAGTCAACAGTCAACAATTTTGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCTCCCCGCGCGGATGGGTGGGTGTTAAAAATCGGCTTTGAGCAACAACGGCTGAAGTTTAGGCAGAGTCAGGCTTTTGGCGATTTTCTGTTTCAAGACACCCGCGCACCTTATCCCGCAAGGGTTTCAGGCATTTTGGTACTTCCCAATCAGAATTTTTCATGCTACAATTACACCATCCGCGCAACCGAACCTTGAAAACTAAATACAGACCGTGTTTCAGGTCGCCGCA # Right flank : CTAGTTAGTCTCAAAGAGAGATGACATAAAGGTAGAGAAACAAGA # Questionable array : NO Score: 9.18 # Score Detail : 1:0, 2:3, 3:3, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAAACATTAACTAATCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.50,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [48.3-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.91 Confidence: HIGH] # Array family : NA // Array 1 34461-35837 **** Predicted by CRISPRDetect 2.4 *** >NZ_LUHI01000068.1 Anabaena sp. CA = ATCC 33047 contig145, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================================ ================== 34461 37 100.0 40 ..................................... TAATGTGAGTACAGGTATATATACTGTACCAGTAGGCAAA 34538 37 100.0 41 ..................................... TCTGTATTCGATGCCATATCTGCGAGGGATAATACCCTGTA 34616 37 100.0 38 ..................................... TACTCGTAGCTGTAGTAGCTGTAGTTCCGGTGGTATTG 34691 37 100.0 34 ..................................... AGAAACGGATTAGAGCAACTAAGAAAACTGGGTG 34762 37 100.0 39 ..................................... GCTCCTTGGTGCGGGTATCGGGAAAAAGATCACCCTCAG 34838 37 100.0 43 ..................................... CTGTAATACTTGTTGTAAATATTGGTAAGCTTCGTTTACTAAC 34918 37 100.0 36 ..................................... GGCACATAAATAATAATACTCATCGCCCCAAACCCT 34991 37 100.0 33 ..................................... TTAGACTTTTTAAGTAGACGATCAACTAGCACC 35061 37 100.0 44 ..................................... AACTGAAAAATCACTTTGATATGGCTCGTATGTAGCCCCCAGCA 35142 37 100.0 42 ..................................... CACAAAATTAAGACAACTGCTGGTTGGTGTACGCAGTGTCGG 35221 37 100.0 39 ..................................... AGGTGTAACCCTGACAATTACTTCATGGCATCGAGGGTC 35297 37 100.0 34 ..................................... ATAGCTAACGCAGGAGTAGAGTAGGTAATGAGCA 35368 37 100.0 35 ..................................... ACAAACTTTTAGATAGATACATCAAAAGTGATCAT 35440 37 100.0 35 ..................................... TGCTTCTTTATTGGGATTGCCGCAGCGAAACCCTA 35512 37 100.0 34 ..................................... TGTAGAATTTAATGAGAGCAATAATCCCTAGATA 35583 37 100.0 34 ..................................... GGGGACAGACCGAATCTTAAATATCATTGCTGCT 35654 37 100.0 33 ..................................... GCTCACGCCGAGGGTATGGCTCTAGCTGGTGAC 35724 37 100.0 40 ..................................... AAAAAGGAACTTTTAGGGCGGAGGATATCGCCGACACCGT 35801 37 75.7 0 ..........................ACCCAA.TTG. | ========== ====== ====== ====== ===================================== ============================================ ================== 19 37 98.7 38 GTTGCAACATTAACTAATCCCTATTAGGGATTGAAAC # Left flank : TGCTCAGACCAGTTTTGCTAATGTATTCATGAGTGGAGATTGGATAGTTAACAGACATGGTTCTTGGTCACAGGAGAAAGCTTATGTTACAGGTTTAGAAGCGGCAAATTTAGTCATTTCTAATTTGGCAAGCGGTACACCTGCTGAGATTTTACCCGTTGAGCCAGACGAAGCCCATATACAAGTGGCTAGAAAAGTTAATCAAACAGTGCGAGAATTAGGTAAATCTATTCTGCCTGATTTTTGGTTGCCGTAGGGGCGGAAAGTATTCAATTGCGCGGATGGGTAGGTGTACAAATTTGGTGTTAAAGCAAAATGGCTGTATTCCTTGTGTCACAAGCTTTTGCAGAAAAATTTATTTAAAACCATCCGCGCACCTTATACAGCAAGGGTTTCAGCGATTTGTATAAATCAACTGACATTTTCCTCGTGTTATGATAGACCCATCCGCGAATCTGAACCTTGAAAACCTCATATACATTAGCTTTCCGGTTGCCGCA # Right flank : CTAGTTAGTCCAAAGAGAGATGACACAAAGGTAGAGAAACAAGAAAATCCCTCCAGACAAGACAAGAGGAGGGACAAATGTTAAATGAAATAGTTACGATCTATTCTGTCATAGATGACTTATTAAAGGCGATTGGACATAAAGATGATATTCGTTGCCAAATGAGTGATGCAGAAATTATCACAACTGCAATGATTGCAGCAATCTTCTTTGGTGGGAATCATAGTCAGGCTTGTAGCTATATGAAAGAGCATAATTTGATTCCAGAAATGTTAGAAAAATCACGATTTAATCGGCGATTACACAAAGTCTCAATGTTGATCAACGATTTATTTCATCAAGTAGGAATGGTACTCAAAGAAATTAGTGAAAATACGGAATATCTTTTAGACTCATTTCCTGTGCCGATATGTGATAACATTCGCATCTTTAATGCGAAATTGATTCAATCAGAAGAATATCGGGGTTATATTGCATCGAAGAAACGTTATTTTTATGGA # Questionable array : NO Score: 9.20 # Score Detail : 1:0, 2:3, 3:3, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCAACATTAACTAATCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.20,-7.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [51.7-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.37 Confidence: HIGH] # Array family : NA // Array 1 69-3148 **** Predicted by CRISPRDetect 2.4 *** >NZ_LUHI01000079.1 Anabaena sp. CA = ATCC 33047 contig183, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================================== ================== 69 37 100.0 39 ..................................... ACAAAGGGAGCGCAACCATCCCAAAGAAAATCTTTAATA 145 37 100.0 34 ..................................... CTTTTAGCTGTGCAATCTCTTGCTGTGCTTCCTG 216 37 100.0 41 ..................................... ATCCTTAGCAATCTCATTTAATTTAGCAGTAGAACCATAAG 294 37 100.0 35 ..................................... GATCAGTTATTTGAAGCGGTCAAAGACTTACAAAG 366 37 100.0 37 ..................................... GTTTCTATAATTACTATCGTTGGAGCAATTTATAAAA 440 37 100.0 37 ..................................... ATTTTTAATTTAAAAGACAGAAGTAAAATTGTTATCA 514 37 100.0 35 ..................................... AAAATACTTTTATTCCAGCCGAACTAATTGCTCAA 586 37 100.0 43 ..................................... ATTATTTAATCCTTGTTCGTCATCAACTCGGAAATATTGGCAG 666 37 100.0 32 ..................................... ATTCTTTTTCAAGTTTACCATCGACTAATATA 735 37 100.0 37 ..................................... TTAAAGCTTGGTCAGGATTGTCGTTGTAGAAGCCTAC 809 37 100.0 35 ..................................... TTGCCATTGCTAACTCTCCAGCAATGGCTAATGGA 881 37 100.0 37 ..................................... ACAAAAGAATCCAAACAATCTAAGATGGTATCTTTTG 955 37 100.0 39 ..................................... ATTTAGCTTGGCAACCAGTAGTAGGGTTTACAGATGAAA 1031 37 100.0 34 ..................................... ATTTCATAGACAAAAATGCTGGATTCATAAAATG 1102 37 100.0 37 ..................................... AATCACTGTAAAATTCTCCCGGCTTAGGGATAGACAA 1176 37 100.0 37 ..................................... GGGCTGGGTATCGTTGCCTCCCAACTTTTCTACGTTG 1250 37 100.0 35 ..................................... AAATCATCACAGGTCAGTTCATCTTCTGGTTCAGG 1322 37 100.0 37 ..................................... ATAAATGGACACAAATATCGGGAAGTAGAACCGCAAT 1396 37 100.0 38 ..................................... AATATTACTTATTCTATTCAGTTCTTAGATAATGTAGG 1471 37 100.0 37 ..................................... GCTAAATTAGAGCCTCCTTCCCCTCCTGCCCCTTCGG 1545 37 100.0 53 ..................................... NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCATC 1635 37 100.0 37 ..................................... TCTGTACACCGTCACTCTGTCCGGTCGCTCTCTTTCG 1709 37 100.0 36 ..................................... CCGCTATCGCTATCCTTTGCTAAAGCAAAGAAAAAT 1782 37 100.0 35 ..................................... ATATCTAGCCCCAGTACACCCCGGAACACGGGAAT 1854 37 100.0 41 ..................................... TAGGCTGAGGGTCAGGAATTCCATCGCCGTCATCGTCCAAG 1932 37 100.0 36 ..................................... TCATAAATTCCCGGTGTTTTGTATTGGCTAGCTAAA 2005 37 100.0 37 ..................................... AGAAATTACACATCTTTTTAGCTATCAATAATAGACT 2079 37 100.0 36 ..................................... AAGCTCCCCCCATCTAAAGCGAAAGCATCATTAAAT 2152 37 100.0 36 ..................................... ATCTTCTGACATCTGGAACAATCTATTTTGGTTCAA 2225 37 100.0 41 ..................................... GCTTAATTATTTAGGTAAACCTATGCCCACATGGGAATTGT 2303 37 100.0 37 ..................................... TCGAAAAGCCATCTGAGCTTGATAAACTGGGGCGTTA 2377 37 100.0 34 ..................................... TTTTCGTTGGCTTGGTTCTATTCTCTCTTTTAAA 2448 37 100.0 37 ..................................... ATAACCCACTACCACCCAAGATGTACGCTGTCATATA 2522 37 100.0 38 ..................................... AGAAATTATTCACAATCACTCAGGGGGCGAGCGACCGA 2597 37 100.0 37 ..................................... AAGTTGTACAGGTACGTCGTCAGAAAGGTACAGGTTA 2671 37 100.0 37 ..................................... ACACCAGTTTTTGGATGACTCCAGTTGTTCGCTTTAG 2745 37 100.0 36 ..................................... ACCAGCATCAATAACTAAGTCTTCAGGTAGACCATT 2818 37 100.0 34 ..................................... CTATACCTGACTTAGTAATGGGTTCTCTGTTAGC 2889 37 100.0 36 ..................................... ATTGTTTCCCCAGATAACAGAGTCATCATCAACCAC 2962 37 100.0 37 ..................................... GCTATAAGCACAAGTACAAATATTAATAACTATGCTG 3036 37 100.0 39 ..................................... AAGGAATCAAAAGCTTCTACAGCAAGAATCATTTTTCGC 3112 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ===================================================== ================== 42 37 100.0 37 GTTTCCACCAACTATTACCCCGCAAGGGGACTGAAAC # Left flank : CACCAACTATTACCCCGCAAGGGGACTGAAACACAAAGGGAGCGCAACCATCCCAAAGAAAATCTTTAG # Right flank : CANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTCTCAGTTTCCACCAACTATTACCCCGCAAGGGGACTGAAACCACTCGATATAAAGCGGGTTAATTCGTAGGCGATCGCTTGTTTCCACCAACTATTACCCCGCAAGGGGACTGAAACTCTTCTCGTCCTTCTTTTGATTCTCTTGATCAAGAGAGTTTCCACCAACTATTACCCCGCAAGGGGACTGAAACATTTGGTAGAAGCCCTAATAAAAAAGGATGAATTTGTTTCCACCAACTATTACCCCGCAAGGGGACTGAAACCTTAAAATAAGTTCTATAAACTGATTTCGTTTAAAGTTTCCACCAACTATTACCCCGCAAGGGGACTGAAACCCGGCTACACCTGTGAGTTAGATTTTACCCCTGGGTTTCCACCAACTATTACCCCGCAAGGGGACTGAAACTTATCTAG # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:-0.00, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCCACCAACTATTACCCCGCAAGGGGACTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [11,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.70,-6.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [53.3-1.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.01,0 Confidence: HIGH] # Array family : NA // Array 2 3238-3788 **** Predicted by CRISPRDetect 2.4 *** >NZ_LUHI01000079.1 Anabaena sp. CA = ATCC 33047 contig183, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 3238 37 100.0 39 ..................................... CACTCGATATAAAGCGGGTTAATTCGTAGGCGATCGCTT 3314 37 100.0 37 ..................................... TCTTCTCGTCCTTCTTTTGATTCTCTTGATCAAGAGA 3388 37 100.0 35 ..................................... ATTTGGTAGAAGCCCTAATAAAAAAGGATGAATTT 3460 37 100.0 35 ..................................... CTTAAAATAAGTTCTATAAACTGATTTCGTTTAAA 3532 37 100.0 34 ..................................... CCGGCTACACCTGTGAGTTAGATTTTACCCCTGG 3603 37 100.0 37 ..................................... TTATCTAGATATAGATTTTTCGCCGGACTAACGATAT 3677 37 100.0 38 ..................................... TTACAGAGCTACCACGCTCTATTTATCCTGACTCTCGG 3752 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ======================================= ================== 8 37 100.0 37 GTTTCCACCAACTATTACCCCGCAAGGGGACTGAAAC # Left flank : GCTTTAGGTTTCCACCAACTATTACCCCGCAAGGGGACTGAAACACCAGCATCAATAACTAAGTCTTCAGGTAGACCATTGTTTCCACCAACTATTACCCCGCAAGGGGACTGAAACCTATACCTGACTTAGTAATGGGTTCTCTGTTAGCGTTTCCACCAACTATTACCCCGCAAGGGGACTGAAACATTGTTTCCCCAGATAACAGAGTCATCATCAACCACGTTTCCACCAACTATTACCCCGCAAGGGGACTGAAACGCTATAAGCACAAGTACAAATATTAATAACTATGCTGGTTTCCACCAACTATTACCCCGCAAGGGGACTGAAACAAGGAATCAAAAGCTTCTACAGCAAGAATCATTTTTCGCGTTTCCACCAACTATTACCCCGCAAGGGGACTGAAACANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTCTCA # Right flank : CNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGTGTTTCCACCAACTATTACCCCGCAAGGGGACTGAAACCACCTTGTTTTAGAGAGATGAAAAATCCTGAAAGAGTTTCCACCAACTATTACCCCGCAAGGGGACTGAAACAATAAAGTTCGGATACTCAAGAATAATTACGAGTTGTTTCCACCAACTATTACCCCGCAAGGGGACTGAAACTGTCAAGACTTTTGTGTGGCAATACTTCCAGCTATTTGTTTCCACCAACTATTACCCCGCAAGGGGACTGAAAC # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCCACCAACTATTACCCCGCAAGGGGACTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [11,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.70,-6.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [8.3-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.74,0 Confidence: HIGH] # Array family : NA // Array 3 3911-4166 **** Predicted by CRISPRDetect 2.4 *** >NZ_LUHI01000079.1 Anabaena sp. CA = ATCC 33047 contig183, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ====================================== ==================================== ================== 3911 38 100.0 34 ...................................... CACCTTGTTTTAGAGAGATGAAAAATCCTGAAAG 3983 38 97.4 34 A..................................... AATAAAGTTCGGATACTCAAGAATAATTACGAGT 4055 38 100.0 36 ...................................... TGTCAAGACTTTTGTGTGGCAATACTTCCAGCTATT 4129 38 100.0 0 ...................................... | ========== ====== ====== ====== ====================================== ==================================== ================== 4 38 99.3 35 TGTTTCCACCAACTATTACCCCGCAAGGGGACTGAAAC # Left flank : AAGGGGACTGAAACATTTGGTAGAAGCCCTAATAAAAAAGGATGAATTTGTTTCCACCAACTATTACCCCGCAAGGGGACTGAAACCTTAAAATAAGTTCTATAAACTGATTTCGTTTAAAGTTTCCACCAACTATTACCCCGCAAGGGGACTGAAACCCGGCTACACCTGTGAGTTAGATTTTACCCCTGGGTTTCCACCAACTATTACCCCGCAAGGGGACTGAAACTTATCTAGATATAGATTTTTCGCCGGACTAACGATATGTTTCCACCAACTATTACCCCGCAAGGGGACTGAAACTTACAGAGCTACCACGCTCTATTTATCCTGACTCTCGGGTTTCCACCAACTATTACCCCGCAAGGGGACTGAAACCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAG # Right flank : | # Questionable array : NO Score: 2.82 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TGTTTCCACCAACTATTACCCCGCAAGGGGACTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [11,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.70,-6.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [1.7-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.74,0.41 Confidence: LOW] # Array family : NA //