Array 1 1589785-1591828 **** Predicted by CRISPRDetect 2.4 *** >NC_012796.1 Desulfovibrio magneticus RS-1, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ======================================= ================== 1589785 32 100.0 36 ................................ GTCTTGCCCACCCACACGCCATTGATCCAGACATCG 1589853 32 100.0 34 ................................ CGGGAACTCCAGCAGCACCGACGGGCAATCCGCG 1589919 32 100.0 34 ................................ GACGACTGGGCCAAGCAGGTCGCCGCCGGCACCA 1589985 32 100.0 35 ................................ CAGGCGGCCACGGAGGTGGTGGCGTAAATGGACAT 1590052 32 100.0 37 ................................ GACCTGGACGAGTACCAGGATTACGAAATGATCGGGG 1590121 32 100.0 34 ................................ CCCCCATGCCGCCGCGCCTCCTTGACCAGATCAC 1590187 32 100.0 34 ................................ CACGAACGGTAATTCCGGTCTCCAGACCATGCCA 1590253 32 100.0 35 ................................ CATGAGCTGGCCGGCCCCCAGCGGCGTGGACCCCT 1590320 32 100.0 35 ................................ CAAGGGCAGCTCGCCGGAACCGACCGAGCCGGCGG 1590387 32 100.0 34 ................................ CGGCCGTGCCCGGCAGCGTCCCGGGGCAGGATTC 1590453 32 100.0 39 ................................ CGGCTTTTGACGTTTGGAACTGTAGCCCCCTTGGCTTTA 1590524 32 100.0 35 ................................ CGGCTCCCCGGCCGGATCGGGCGAGGCCAGGAGTT 1590591 32 100.0 36 ................................ TGGGCCAACCCAAGCCAATGAAGAGTCTGACTTTCC 1590659 32 100.0 35 ................................ TTTCCCCTGCCCTGGTACTTGTAGACCCAGCCGCC 1590726 32 100.0 34 ................................ TTGCCCTTGAGCAGCAGCCGACCCTTGATGACCG 1590792 32 100.0 36 ................................ CTGGATGCCGGTGACCACGCCGCCGGGGCTGTCGCA 1590860 32 96.9 36 ...............................T CAGTCGCACAGTGCCGCCGCCGGGGCCAATACGCCC 1590928 32 100.0 35 ................................ GATATGACCCCCGTCAAGGCCGCCCTGGCCCCGTA 1590995 32 100.0 35 ................................ ATCCTGACGATGGCCCACAATGACCATCTCCAGGA 1591062 32 100.0 35 ................................ CAAACGATTTGCTTGGTGCCGGAAAAATTGTGCGT 1591129 32 100.0 36 ................................ CTTAAAGTCGTTGACGCTGGTGGTGGCGCACCACAT 1591197 32 100.0 35 ................................ CTCCGACGCAATCTCTGTCACCTACCGAAGCTCGT 1591264 32 100.0 35 ................................ ATCAGGATGTACAACAGGTCGGCAAACGCTTTTGG 1591331 32 100.0 34 ................................ GCGGCCAGGGTTGTGTCCACGCCAACAAACTCGC 1591397 32 100.0 34 ................................ CTATCCAACTCGTCCAGGAGGCTGTCGGCCGCAA 1591463 32 100.0 36 ................................ AAACGTGTCCACGGCCTCGTCGTCGAAATTGCAGGC 1591531 32 100.0 34 ................................ CCGGGATGCGCCACTCTCGTGGTCCCCGTCCACC 1591597 32 100.0 34 ................................ TGCGTATTTACGTTGCCTGTTGAGGTGGAGGGCG 1591663 32 100.0 35 ................................ TACGTCAAAGACGCGTCCACGTCCTGGTTGGTGGC 1591730 32 100.0 35 ................................ GAGAACCAGCACGTCGGCAAGCCTTTCGTGAGCCG 1591797 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ======================================= ================== 31 32 99.9 35 GTCGCCCCCTGCGCGGGGGCGTGGATTGAAAC # Left flank : CGGCTATCCGCCGCTTTTGTGGAAGTAGGCCATGTTGGTGCTGGTGAGCTACGACGTGGCGACGGCTGATGACGGAGGATCTGGTCGGCTGCGCCGTGTGGCCAAGGCGTGCAAGGATTATGGCCAGCGCGTGCAGTACTCGGTGTTCGAGTGCCTGGTTGATCCTGGCCAATGGGAGCGTTTGAAGCATCGTCTGCTTGGTTTGATTGACCCGGACAAGGACAGTCTGCGTTTTTATTACCTTGGGTCGAACTGGCGGGGGAGGGTAGAGCATGTCGGCGTCAAGCCCGGCGTGGACCAGGAAGGGCCGCTTATCATCTGAATCGCGAACCGCCAGCGCCCGGCAAAACCCCGGCCGGATCGCGATGGTGCTAATTGTAGTGATAACAGTCGGATAGCTTGTCAGGCTCTTTGACAACAGAGCACGTGTTGGTAAGAGTCGGAAGGTTCGCGGCAGCGTGGTTCTCAGGCCGCGCAACCGCTAGGTCGCGTAAGCGACA # Right flank : CGACAAGGCGTATAACAGCGTGTTGAAAAACTCCGCCAAGTGACCGAGAATCCAGCCATCGGGGTTCCGGAGGTGATCTGATGGGGCTTGGCCGTCAGGGTGATCAGCAGGGGACGATGTATCTGGCCTGGGATGAGATCCCTCGGTCTCGTGGGCACGCTTTTTACGATCGTCTCCAGCAGATTCTCCGGAAAGCCGGCTTCGATGGTTTCGCCGAGAAGCTGTGCAAGCCCTTCTATTCCGACAAGGGGCGTCCCTCCATTCCGCCTGGCCGGTATTTTCGGATGCACCTCGTGGGGTATTTCGAGGGCATCGACAGCGAGCGCGGCATTGAGTGGCGCTGCGCTGATTCGCTTTCCCTCCGGAATTTTCTCCAGCTTTCGCCCAAGGAGTCTGTGCCGGATCATTCCTCGCTCAGCCGGACACGGTCCCGTCTGCCACTGGCGACCCACCAAGAGGTTTTCACCTGGGTTCTCAAGCTGCTCAGCAAGGATGGCTTG # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCCCCTGCGCGGGGGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCCCCCTTCGCGGGGGCGTGGATCGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.40,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [33.3-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.37,0.64 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 4726586-4725356 **** Predicted by CRISPRDetect 2.4 *** >NC_012796.1 Desulfovibrio magneticus RS-1, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 4726585 28 100.0 32 ............................ GACACTGCATCTGCGGCGGCCTGGGCGGTAGC 4726525 28 100.0 32 ............................ TGCTGCACGTTGACGATGGTCAACGCCTTGCC 4726465 28 100.0 32 ............................ TGTTCGCCGTCCTGCTGGTCGAAGAACTTGGC 4726405 28 100.0 32 ............................ ATGATGAGTTCCACGGTTTCCTCAAGGGCGTT 4726345 28 100.0 32 ............................ ACCCTCACCACCTACCGCGCCGCGCTGGAGGC 4726285 28 100.0 32 ............................ ATGCCGTCGCTTGACCTTATCGTAATCGACGA 4726225 28 100.0 33 ............................ TACAAAGTGAGGACCGGCGCGCTTTTGGATGAA 4726164 28 100.0 32 ............................ TGTGGCGGCAGCACCAGTTCCGGGTTTGCTAC 4726104 28 100.0 32 ............................ ACCAGTGCCACAAGGAATAGACCGAAAAAGAC 4726044 28 100.0 32 ............................ AACGAGCGCCGCAACGAGGTGCGCCGCCTCAA 4725984 28 100.0 32 ............................ ATTGAGAGCGCCCAGGACTGCCCGCATTTCGA 4725924 28 100.0 32 ............................ ATCAAGCAAAACCCCAGGAGGACCCCGTGGCA 4725864 28 100.0 32 ............................ AGTGCGACGACTGCCCGGCCGGGTAGCCGGAT 4725804 28 100.0 32 ............................ ACAATGCAGGCCGCCAGGGGATGGCCATCAAG 4725744 28 100.0 32 ............................ AATTGAAAACCAGATGCTACCGTCTTTACGGA 4725684 28 100.0 32 ............................ ACTTCAGCCCGCGCCGGGTTCTTGGCCCTGCC 4725624 28 100.0 32 ............................ ACCATCGGCGTGTAGTGTCAGCAGGTTTTCGG 4725564 28 100.0 32 ............................ TTTACGACGCCGGCAAGCCGGTCGCGGTCGGA 4725504 28 100.0 32 ............................ AAGACGGGACGCCGAAATGGACGACGAAGTAT 4725444 28 100.0 32 ............................ AACGCGCCCGAGTGGCTACGGCTGCTGGTGGA 4725384 28 100.0 0 ............................ | C [4725358] ========== ====== ====== ====== ============================ ================================= ================== 21 28 100.0 32 GTTCACTGCCGCATAGGCAGCTCAGAAA # Left flank : GCACGAGTTGGTGACGCTTATGGCGACGAATTGGATGATGCGGTTACATGATTATGCCGTGGCAAGCCCCATTTTGTGCACTCCAAGCAAGGTAAACTATCGAATAGTCCATCGTGTACAGGTGAAAAGCAATCCGGAGAGGCTTCAACGGAGATTGATGAAACGTCATGGGGTAGGTGAGGATGAAGCCAAACAGCGAATTCCAAACAGTATTGCGCAAAGGACAAAACTGCCTTTCATCAATGTCAAAAGCATCAGTACGGGGCAGGACTTCAAGTTGTTCGTCAGCCACGGTCCGCTTCAGTCTGTTGCGTCCTCGGGAACATTTTCATCCTACGGGTTGAGTCAGACAGCTTCCATCCCGTGGTTTTGACCTTTTTTTTGTTTCGTTTAAAAAACTATTTAATTACAACCCATTGCTTGTCGGCCAGGAAAAAGGTATTTGGGTTAAATAGTCCAAAACTCGTTATGATTGCTGTATTTTCAGCAAATTGTGTCCA # Right flank : TGGAGGCGAAGCAACCCCTCAACGGCGATTACGCCCCGCTTGAAGTCGCGTCCTTGCGGGGCGTATGTAATATTGCTTATGCCTTCTTGCCTTGCTCTCTCTTTTTCCGCAAGTACATTGGCCGGGCAATTTCCAGCCCATTGTCTTTGGTCTCATCTAGACTTGCAAGTCTCGTCCGCATAAACTTCATTTGGTAGCTTGTTTCTTTGACAATGGACGCTTCGTCTTCACTGTCTGCCAATTTTTCAAGGTTGATGCATACTTCTGTAAGCCACTTGTCATCCTTGGCGCGGTTTTTGGCATTTTTGAGAAGTCTTTTGACTTCTGGCCAGTCTCCGCGTTTGGCCGCCTGCTGCGCTTTTTCTTGAATATCAGCTGCTTCTAGCTCATTGGCCCGGCGCACGGTCAAAGAGTCTTCTGTGACGGATTCCCAAGCTTTCGCAGGGAGTGAAGGTAAGGCCAACTTGATCGGAGGAATGTTAAAAGATTCGCCATTGAGA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCATAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCATAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [35.0-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //