Array 1 3568888-3562502 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP045541.1 Acinetobacter baumannii strain 5457 chromosome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 3568887 30 100.0 30 .............................. GTGAATAAGATATAGACTTATCTTTATCCA 3568827 30 96.7 30 ............................A. TAAGGGATAGTTTGCTCATGCATGACAGTA 3568767 30 93.3 30 ............................GC TTTTTGCTCTCTTACAGTGGTTCTTATAAA 3568707 30 93.3 30 ............................AA CACCCACCATTGTTTCGGCTTAAAGAAGTC 3568647 30 93.3 30 ............................CA ATTGAGCCATGCTTAGCAATTGATTTTTTA 3568587 30 93.3 30 ............................AG ACAAATCTTGAACGGCAAAACCTTCCGGAA 3568527 30 96.7 30 .............................A GACATGACCACGTAAAAGCAAACGGAACCA 3568467 30 93.3 30 ............................AC AAAATGCAACTATGCAAGCTGGATTTCCGC 3568407 30 93.3 30 ............................GG CCAAAAGAAGGGGAAGAGTGTTGTTACATA 3568347 30 96.7 30 .............................C TTTGCTCTCAGCCTCATTATTTACACGAAT 3568287 30 93.3 30 ............................AA ATTGATTGACAATGCCCCATGTTTTGCCAA 3568227 30 93.3 30 ............................AG ACGGCACCAGCGTTGCTACTGTGGCTTATA 3568167 30 96.7 30 .............................A AAAAGCCTAGTGATTTTAGAAATTTTTCAA 3568107 30 96.7 30 .............................A ATGGTTTTTGCATCATATGGAACTGGTACG 3568047 30 93.3 30 ............................AC TAAAGAAGTTAGAGTCAAAAACCAAACCAC 3567987 30 93.3 30 ............................GC CACAGCATAAGCAATACTTCGCGCTGAATG 3567927 30 96.7 30 ............................A. CCATAGCAATTTCAGACCGCATAGGCTTAA 3567867 30 96.7 30 ............................A. GACAGGACATGACAAGGAGGCGGTATGAAA 3567807 30 93.3 30 ............................AA TTAAATCCAATTTCCCTAAATCCTTGAACA 3567747 30 100.0 30 .............................. ACTACCGAATACAAGGTGGAAAGAATGCAG 3567687 30 93.3 30 ............................AA GTAAGCTGAACGTAGCCGCGACCATAATAT 3567627 30 93.3 30 ............................AG ATCAATACACCATTGTCAGGTCTTGATACA 3567567 30 100.0 30 .............................. GTTGAGCACCAAACCACGAAATATCAACAT 3567507 30 93.3 30 ............................AA CCGCGCCAGATTTAGCAACAGTAAAGTTTG 3567447 30 96.7 30 ............................G. TCAGGGTTGTATCTGTTAGGATATGAGTAA 3567387 30 96.7 30 .............................A AGCTTTTTTTTGATTACTGGTAGTTTAATG 3567327 30 100.0 30 .............................. TTGGAGCCTTGCCGCCATCTTCGATTTTTG 3567267 30 93.3 30 ............................GC AACCGTTGGTTTTAAGTTAGACCTAATGGT 3567207 30 93.3 30 ............................AC AAATGCATAACAGTATCGGTAGCTAATTGA 3567147 30 100.0 30 .............................. GACTGTAAATTGCCCTGCTGGAGCAGTATT 3567087 30 96.7 31 .............................C ATGTTCTTGAATTGGAGCGCAGACGAGATCA 3567026 30 96.7 30 ............................A. TAATGGTCTTGACCGTGTTTACAACGAAGA 3566966 30 96.7 30 ............................A. ATACACGCCAATCTTGATTGACAACATCAC 3566906 30 93.3 30 ............................CC GTACATGTTGACGTAATCATGTTCATCCTT 3566846 30 93.3 30 ............................AC GAATTCCTTTTGCGCATGGCGCATACCAAG 3566786 30 100.0 30 .............................. GTGCCTCTTTGGTCAACTGTGACAAGCCAA 3566726 30 100.0 30 .............................. AAACCCATACGCTCCAGACAACATTACAAG 3566666 30 93.3 30 ............................GA CATGAGTGGGAATATGAGGAAGGTAATTTA 3566606 30 100.0 30 .............................. TTAGCTCATTGCTGCGTTGCTCCAATTTAA 3566546 30 100.0 30 .............................. CAGAAATCTTTTGTTGAGTGATTGGCGGAA 3566486 30 93.3 30 ............................AG AGTCACAAATTTATTTAGGCAAGAAAAATA 3566426 30 93.3 30 ............................AC CAAGCCCATTATTCGGGTTTACCGTATTGT 3566366 30 96.7 30 ............................A. GCAGAATTAACCCACACAAATCAGCAATAA 3566306 30 93.3 30 ............................CC AAAAGGGATTAAGTTCACAAAAGATTTGGC 3566246 30 100.0 30 .............................. TTTCAGCCGCCTTCAACATGGCTTCAGCTT 3566186 30 96.7 30 ............................A. GCCAAGCGAGATAAGGAAAAGCAAGATAAA 3566126 30 93.3 30 ............................CA TCCTTAAATACTGAGATCTTTTTTGATCTT 3566066 30 96.7 30 .............................C TGCACGTAGCCTTGCAACGCCCGATTCAAC 3566006 30 96.7 30 ............................A. TGTGTTGTCTAAAACAGTCTCACCCTCATT 3565946 30 93.3 30 ............................AA TGACATTTATTGAGTGGTGTTCTAGTGGCG 3565886 30 96.7 30 .............................C TCGGCACAGGAGTGCATTCGAAGTTGATGA 3565826 30 96.7 30 .............................G AATGGGTATTAGAACTCAGTGAAGATATGT 3565766 30 93.3 30 ............................CA CTTGGGCATGTTCTTAGATCCAGACACAAA 3565706 30 96.7 30 .............................C TACCTGCTAATAGCTTCTTTGCCCTAGTTC 3565646 30 100.0 30 .............................. GCTTAACCTTCACGCCATTTGGATAAACTG 3565586 30 96.7 30 .............................G TTGCGCTGTTTTTGAACGTGTAATTGGATA 3565526 30 93.3 30 ............................CC AAAGCGGTTAAGCCTCCAAGATTTGCATAC 3565466 30 96.7 30 ............................A. GGTAATACAATTCAATCTCACTACAAGAAT 3565406 30 96.7 30 ............................A. ATATTTTACGTGTTGATTCAACTACGGGTG 3565346 30 100.0 30 .............................. TGGGGTAACTGGTGCCTTTAAGTTGTTTTG 3565286 30 100.0 30 .............................. CCAAAGTCTTGTTCAATATCTTGTTGTTGA 3565226 30 100.0 30 .............................. GCTCATCAATACAGCTACAAGAAAATTTGT 3565166 30 93.3 30 ............................AG CATAAGCATAAAAATTATGTGTGAATATCA 3565106 30 93.3 30 ............................AA TATGCAACAATAGGAAATTGCTCAGCATCT 3565046 30 93.3 30 ............................AG TTACATCATTGCTTTTAGTCTTTTCTATCT 3564986 30 96.7 30 ............................A. GGGCCGCAACCATACGGTCTATGACTTCCA 3564926 30 96.7 30 .............................C ATGATCATAGCCCTTATAGATATCGTATTT 3564866 30 96.7 30 ............................C. GCGAAAGCGGGGTTTTTTATTGCCTGAAAT 3564806 30 93.3 30 ............................GC ATAGGCATTTACTCCCGCTGTGAGTGAAGG 3564746 30 96.7 30 ............................A. CTGCAAGACCACTGATAGTTGTTGAGAATC 3564686 30 96.7 30 .............................G TGGCGTAGCGTTTCCAAAGTTGCCCATTGG 3564626 30 93.3 30 ............................CC AAGCGTGACCAACTCACCAGTTGTCACAGG 3564566 30 100.0 30 .............................. TTGAAACTTATAGGCTTGGCTTGGGTTATC 3564506 30 96.7 30 .............................G AAAGGGATTTAAAAGCAGTTACATAAAATT 3564446 30 96.7 30 .............................G AATTGGATTTCGTAAATCATTGAGCAAGTT 3564386 30 93.3 30 ............................AG CATCAAGTAGATCAGCAGTTACCTGTTCAG 3564326 30 100.0 30 .............................. CTGTATTAGTGGCCTTCATGTGCATTAAAA 3564266 30 96.7 30 ............................A. ACATGCCCACGTTGAAAATCGGGTACCAGT 3564206 30 96.7 30 ............................G. ATTAAAACTGCTTATAAACTTTCTTAAATC 3564146 30 100.0 30 .............................. GAAAAAAAGCATCATATTGTTCGGGGCAGG 3564086 30 96.7 30 ............................A. TTTTTCTGTTAACTCTAAAATACCCTTCCG 3564026 30 96.7 30 .............................A AAAGTAGAGAGTGGCGGTGATTCACTAAGA 3563966 30 96.7 30 ............................G. TGTCTGATCCGACAATTTGGCTGAGTACGT 3563906 30 100.0 30 .............................. GTACAACAATATGACCCGTATCGATGTAAC 3563846 30 93.3 23 ............................AA CAATTGCCTGAGAGCCACCAGTA Deletion [3563794] 3563793 30 100.0 30 .............................. TGATAGCTAAAGTAGAAATCAAAGTCGCAA 3563733 30 100.0 30 .............................. TTATTGCTGGGAATGAAACATCAAAGCAAA 3563673 30 96.7 30 .............................G TCCGAAATTCAGATGGTGAAGTGACATATG 3563613 30 100.0 30 .............................. CAACCTACGCAAGTATTATGGGAACTATTT 3563553 30 96.7 31 ............................G. CTTTATCAGTTACGATGGCATGAGTTTTTGT 3563492 30 96.7 30 ............................A. AGCACGAGCAAGTTCTTGAGATGCCAAAAA 3563432 30 96.7 30 ............................A. ATCTCGCAGATTTGGACAAGGTCACGAATA 3563372 30 100.0 30 .............................. GGACAAAGATTATGACTGAGAAAGACGAGA 3563312 30 100.0 30 .............................. GGATGTGCAATTTGGTCAAGATGTGGGGAG 3563252 30 93.3 30 ............................CG AACACGACTTGAACCAAAGTTAGAAAAATA 3563192 30 93.3 30 ............................CA ACTAAAAGCTATTTATGGGGGTAAAAATTT 3563132 30 96.7 30 .............................G TCATTGGCCGGCCATTCACAACCCCGATAA 3563072 30 93.3 31 ............................CC AAAAAATGAGGAAATTGGACAATATCCAACA 3563011 30 96.7 30 .............................G TTGAACGAGTTATTCATAAGTGCCCGAAAT 3562951 30 93.3 30 ............................AG CGGAAATCTTTTCAAGTGCGTAGGGGATAA 3562891 30 100.0 30 .............................. CTCCAAGTAAAGAATAAAACAATATACCGC 3562831 30 96.7 30 .............................C AAGGCGATCCACCTCCCGTCACAGTCATTT 3562771 30 93.3 30 ...........T.C................ TGCTAAAAGGATTTATGCTTTAAAATACTT 3562711 30 86.7 30 .......A.....C...T..........G. TGGCGTACGGATAACGGAAGAAAGCATAAG 3562651 30 86.7 30 .......A.........T..........AA ATAACCACGGTTGTGGTAAGTCACTTTTAC 3562591 30 80.0 30 .......A.A.....T.T..........GC GTTCAGGTTGAGGAGATGAAGTGATGTGAT 3562531 30 70.0 0 ...T...A...T.....T..C...AGCG.. | ========== ====== ====== ====== ============================== =============================== ================== 107 30 95.6 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GGCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCATAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : AAGATAAAAAAACAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTTAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGCAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCGACCAACCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGTCAAAGCGATGGCGAAATCACCGATGCAAAATCGCAGTTACCAGAAGGTGTTATTATTGGCCGTACTTGCTTAAACTCATTAGAACTTGCCCAAAAAGCTATTGCCGATGGTGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAAC # Questionable array : NO Score: 5.31 # Score Detail : 1:0, 2:3, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.27, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.60,-8.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [20-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //