Array 1 414529-413305 **** Predicted by CRISPRDetect 2.4 *** >NZ_VTTO01000005.1 Azospirillum sp. B21 NODE_5_length_469631, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 414528 36 100.0 30 .................................... GGCGGCTGCCCCAGATCCAGCGGCAGCTGC 414462 36 100.0 30 .................................... CAGGGTCGTCATGTTGTCCTCTTGGTTGCT 414396 36 100.0 30 .................................... TGCGCCGTCACCCGGATAGACCCGCAGCTG 414330 36 100.0 30 .................................... GGGGCGGCGGATGAGGCGCAACCGGTGGTA 414264 36 100.0 30 .................................... CGCGCCGCGGTCGATCTCGTGAAGCACTTC 414198 36 100.0 30 .................................... GAGCCGCACGAGTTGGAGCGCCGCTATTTG 414132 36 100.0 30 .................................... TGACGTAGTCGGGTGCCCAGCCGTCTTCGC 414066 36 100.0 30 .................................... ACCCCAACTACAGCGCGTGCGGCGAGATCG 414000 36 100.0 30 .................................... AGGTCGCCCATGGTCAGAGCGCCACGCCCG 413934 36 100.0 30 .................................... GTGCCCTCGATCCGGACGCTGTCGGCGATG 413868 36 100.0 30 .................................... TCGAAGGCGCGCTCGCCCAGCCGGCCCAGC 413802 36 100.0 30 .................................... AGCGCGCACGGACTGGGTAACGGGCGCGGG 413736 36 100.0 30 .................................... CGCCCGGTTCTGGGTGCACGCGAGCGCCAG 413670 36 100.0 30 .................................... GATCGAGCCCTTCGCCGAAGAACTCGCCGC 413604 36 100.0 30 .................................... AGAGCTGGTTTTGACGCCATCCGGCGAAGT 413538 36 100.0 30 .................................... CGGCTGTCCCGCAAAAGCGCCCCCCTTCCG 413472 36 100.0 30 .................................... AAGGCCCTGGCCGTTACTCGGCGCAAGAGC 413406 36 100.0 30 .................................... TTTGAACGCCTCCATCGTGCCGACCGGGAA 413340 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 19 36 100.0 30 AGTGTAGCCGATGGGAAACCGTGGTCCAGCCGCAAC # Left flank : GGGGAAGGCAGCAAAGCCTGGGCGCCGAAGCCTTTGGAATGGCCTGCTCCCCCACCCGCGCGGTCGAACGTGCCGCAACCGGCCTGACGGACCGCGGCAATGTTGAGCGGATACCGGATCATGTGGATGATGGTGCTGTTCGACCTGCCGGTCCTGACCAAACGCGAACGCAAGGCCGCGACGACCTTCCGCAAGTTCCTGCTGGACCAAGGCTTCGAGATGTCGCAGTTCTCCGTTTATCTCCGCCATTGCATTGGCAAAGAGCAATCGGAAGCGCTGACGCGCCGAATCGAGAAGGCAGTTCCACCAACTGGCAAGGTGCACATCGTCTTCATCACGGAAAAGCAGTATGAAACCATCGTGTGCTTTGATGGGCGAGTCCGTCAGCCCTCTCGGAAAAATCCGGAGCAATACGTTCTTTTCTGACGGCCCGAGCGGCGGAATCGAGGCAGTGGAGCGGCGGGATAAGGCTGCTTTTTCAGAGCCTTATCCCGCCACGT # Right flank : CGGTAACCCCTCTACACCCGCGGCGGCGCTAGGGTCTGTTGACATTCGCCGCGTTGCCAAGACTGTAGCGACGAGGTTGATGGCCGCTGCGAAGCTTTTGTCTGCTTTGTCACATCGTGTGGCGATGCGGCGGATGTCAACAGACTCTAGGGAGCCCCCTCACACCAGCGGCAGATCGCTGCCGCCATTGACGATGTCCACCGTGCCGGAGATCAGGTTCTCCGCATACAGTGCCTCCAGATCGATGCCGCCGGCCGGACGCACCGGGCGGATGGCGCGGATCCAGCCGGATATCGCCTGTTCCTGTCGGCGGCGGATCGCTTCCGCCTCGTCCACCGTCACGGCCTGGAAGGACAGGCGGTCACCGGGACGCAGGCGGCCGGCGCGGGGCAGGTCGGCGGAGATCACGGTGGCGATCTTGGCATAGCCGCCGGCGGTCTGATGGTCGTTCAGCAGCAGGATCGGCTGCCCGTTGCCCGGAACCTGGATGGAGCCGGTGA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AGTGTAGCCGATGGGAAACCGTGGTCCAGCCGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.10,-7.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [35.0-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.74 Confidence: HIGH] # Array family : NA // Array 1 151135-151834 **** Predicted by CRISPRDetect 2.4 *** >NZ_VTTO01000009.1 Azospirillum sp. B21 NODE_9_length_252794, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 151135 29 100.0 32 ............................. AGAAGCGCATGATTAAGGACGCTATCCGGGCG 151196 29 100.0 33 ............................. CAGCCGTCATTCTCGACGCTGCGGTCTTCGCTG 151258 29 100.0 32 ............................. GCCCGCTCCTGAGCGTCAAGGCTTTGCCCTTC 151319 29 100.0 32 ............................. CTGGAACTGCTGACCGACTACGGCACCGGCTG 151380 29 100.0 32 ............................. GTCATAACGTTACGCTTGACGGTGCCGCGGTC 151441 29 96.6 32 ............................T GCCCGCCTGAAAATCTACGACGGCACCCCCCC 151502 29 100.0 32 ............................. CAGTGCAGGACATGCGCCTGCTCGGCCTCGCA 151563 29 100.0 32 ............................. GAGATCATCGCGCTGAAGCAGCGTGAGACCGT 151624 29 100.0 32 ............................. GATTACGAGCAGGCGCTGGCCCAGGTCGTCGC 151685 29 96.6 32 ......................C...... CTGCAGCGCGTCGACGTGGCACCGATAGACGA 151746 29 82.8 31 .T......T.....T...........G.G GTGTCGTAGAGCGAGATTACCAGCCCTTCGG 151806 29 82.8 0 ..............T.....T.ACC.... | ========== ====== ====== ====== ============================= ================================= ================== 12 29 96.6 32 GGCTCCCCCACGCCCGTGGGGATGGACCC # Left flank : CGGCCCCCTTCCCTGCGGGACGCCCTTCCTCATGGAGGCGCAGCGGGCGCTGCTGGCCCGGACGCCGCTCCCCCGGCCACGTTCGGAACGGACAGATTCGGTCGGCGGGTCCCATCCCGCCGACCGGGACTCCTGCCCCCACGGGGCCATTGAGTTGGATGGGACGCATACCCGGTAGCGGGTCCCATCTCTGTAGCTAACTCTCAAGACATGCTGACATCTTTTGACAGCATCAGGTCGCTCACTCGACCCTCTGGCCTAATGGGTCCGCGTTGTTGATGCGGCGCTTAACCTTCACCCCCCACAAGCATTTGAAATCCCTCAAGGTTCCGCTGCACCAGGGGATGACATAAGGGTGGTGGCCTACCAGCCCGCCATCATTTTGGAATGACATAGCGCGTCAACGAGGCCATCATACACGTACAGCGCGACAAATACAGCACCCAACACACGCGCGAATCTTGCACATAGTGAATGCTGTCAATAACTTAATGATTAGA # Right flank : CGCTACAGCCAAGAGTCTCAAAACACCTCATGTTCATTCGAAGGAGATCGCATGGCCAACATGTTTCCTGTGCCTCGCCCTTGGGGGAAGCTGCGGCGGGCGGAAGACGGAGGCGTCTTGTCGTCGCTGGGGCTGGCCGATCATTGCGCCGATGTCGGCGCTGTTTTTCTCGCCTTGCTGGAGGTTCCCAACATCCGCCTGGGGCTGGCGCGGCTCGGCGATTTGGAGACACTGGACGATGCCCAGGTGGCGCGACTGTGCGTACTGGCCGCCCTTCACGACCTGGGCAAGGTCAACCACGGTTTCCAGAACAAGGCGCTGCCGAAGGGAACCATACAGGTAGAGGGGCATATCGGCTGCGTGGTCGGCGCGCTGCATGACAGGATCATCCAGGGGGCTTTAGCCAATCTGTATGACGCCATGGACGGTTGGTGCGAAAACGACGGCAACGACGATCCGCTCCTCGCCATCCTGTCGCATCACGGCGGACCGCCGGAGAC # Questionable array : NO Score: 3.09 # Score Detail : 1:0, 2:0, 3:0, 4:0.83, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGCTCCCCCACGCCCGTGGGGATGGACCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [3,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-11.20,-10.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 2 161342-163505 **** Predicted by CRISPRDetect 2.4 *** >NZ_VTTO01000009.1 Azospirillum sp. B21 NODE_9_length_252794, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 161342 29 100.0 32 ............................. CGGATCTGATGCCGTCACCGTCAATGGTACCC 161403 29 100.0 32 ............................. GACCTCGCTCCCGACCTCCCATGCCTCAACCG 161464 29 100.0 32 ............................. GGTCGCTCGGTCGCTAAGCGATCTGGCGTCCG 161525 29 100.0 32 ............................. CGGTCCAAGGCGCTCGCCGACAACACCTCGAA 161586 29 100.0 32 ............................. TGAAGGCCGCCCACACCGCCATCGCCGAGATG 161647 29 100.0 32 ............................. CCGATGCGGCCGTTAACCGCACGCGGAAAGTG 161708 29 96.6 32 ............................T TGAAGTGCTGTACGCCGGCCAATACTTCCAAG 161769 29 100.0 32 ............................. GGCATCTGGGAAATCACCGCCGTCACCGATGC 161830 29 100.0 32 ............................. GGCTATCGCGGCCTGGGCGGCGGGGGCAATGG 161891 29 100.0 32 ............................. TCGCCGGCGGCCTCGCGCTCCTCGAAATCGCG 161952 29 100.0 32 ............................. AAGTGGCTCAGCCAGACCATGCACATCATCAA 162013 29 100.0 32 ............................. GTGTCAATCGAGGCCTTTTACCCGCAAGGCGC 162074 29 100.0 32 ............................. CCCTCGTAGGTCGTGACGTTCTCCTTGCGCCG 162135 29 100.0 32 ............................. TCCGAAATGGGGCGGCGCGGGGCCGCCCCGTC 162196 29 100.0 32 ............................. TGGTCCGCGAAGGATCTGGACGACGGGAACGA 162257 29 100.0 32 ............................. TCGCCGAGCTTCTCGCCGAGTTGGAAGCGGCT 162318 29 100.0 32 ............................. CCGGATCGGACGAACACGGCATCATCGTGGTC 162379 29 96.6 32 ............................T TTCAGACTGGCCTTGTGCGGGTCGTACGAGCA 162440 29 96.6 32 ............................T TTGAGGGCCGTCCCTACATCGACCAGCTTCGC 162501 29 100.0 32 ............................. TGGTTCAGCCGCTCGCCCCAGGTGTTGACGTT 162562 29 100.0 32 ............................. GGCTCCCACCGCGCCGCCTCCGCCTCAACCCG 162623 29 100.0 32 ............................. CACGGCCGGCCAGAAAGCCGCCGACCCGGTCG 162684 29 100.0 32 ............................. GTGACGGTGTAGGCGCTGGATTTGGCGAGTGT 162745 29 100.0 32 ............................. CTCGGGACAGCCGGCTCCTCGGCGTAGGTGAC 162806 29 100.0 32 ............................. GGAACCGGCGCATCGAACACAGCGACGGGCAC 162867 29 100.0 32 ............................. TGGAGGGATGGCGCCGGTGGTGTCGGCAAAAT 162928 29 100.0 32 ............................. GCAGATGGATACATAGAGTGCGGTCTTTTTGA 162989 29 100.0 32 ............................. AGCAGCACGGGCGCTTGGTGCCGCTTCACCGG 163050 29 100.0 32 ............................. TACAGCCAGGGCCGTGAGGACGGGTGGAACCC 163111 29 100.0 32 ............................. GCGCCGCCCAGGCGGAGCGCGACCGGCTGGCA 163172 29 100.0 32 ............................. AACTATGCGCTTCCACTGACCGTCGCCAGCAC 163233 29 100.0 33 ............................. TCGACGCCGGCCAGCGGCACCGCATTGAGGGCG 163295 29 100.0 32 ............................. ATCGCCTACGCTCCTGACGGGACAATTACTGC 163356 29 100.0 32 ............................. TACGGGACCATCTTCGACCTGGGCGGCGGCTC 163417 28 96.6 32 ............-................ ACGTTGATGGCCCACACCGTCGGCACCGGCAA 163477 29 72.4 0 .T.....T.G......C.A.....CT..A | ========== ====== ====== ====== ============================= ================================= ================== 36 29 98.9 32 GGCTCCCCTACGCCCGTAGGGATGGACCC # Left flank : ACCCGGCGTCTACACCTCTCCCAACCTGACCAAGCCGGTTCGCGAGCGCATCTGGGCTGTGCTGGTCGACTGGCATGGCGTGCTCGAACAGGGCAGTGTGGTGATGACGTGGCGTGACCGCGGAAGCGCCGGCAATCAGGTGATCCGGACCTTGGGCTGCCCGCCCGTGACCCTGGTCGAACATGACGGCATCGTGCTGGCCAAGCGTGGGTTGCATGGCGGAGAGGGGACAGACGCCTTCTGCACGATATGACCGTGATCGGCGTGCGTCCGGCGGCCATCTGGTTGATTGAGCGATCGGGGCGAAATACTGCCATCTTTTGGCAGCATTCCCTCCTCTTCCTGTGCAACTCGATCTGACGGAGAGCGTTCCATCCCGTATCCGAGATGACATGGGGAGTGATTGCTGCCATTATGCTCGTATAGCGTGATCTGATTGCAAGCCAGTGCACGCGAGATTCTTTTATGTTGTGAATGCTGTCAGTAGCTTAACAGGCAGA # Right flank : ATGTTTTCCCAACAATCCTAAACCGTAGTGACTGCATCAACGCTCAAAGATCGAAGATGTGCGACTCGCACACATATGCTTGAAACAGCCCTGATTAATCCCGCCTCGTCTTGGGATGGAGCACCACCTCGACAGGTTGCAAGAGCGAACAGGACGCAAGCCAGCGTCCTGCATCGGGGCTCCCCTGAAATCGGCCGCAGGGTTGCAGATCGTCGCACCGGGGAACCCTCGGCAGGCGGCGGCGGTTGGAGGAGGCGACAGAACGCCACTCACAGCTTGTGCGAAAGGCCGACCATGACCAAGCCCCAGCGTCCCGAGTCGGGCCGTGACACGCCCACCACGCCCAGCGCGGAGGCCAACCGGATGCGCGCGGACATCGACCGCGGGTTGACCGGCGACAAGGTCCCGGCCACCGACCCCGCCGCCGCACCGCTCGGCACCGACGACGAGGCCGCCGGCACCACCCCGCCGCACGGCATCTCACGCGATCCGGTGGTTCC # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGCTCCCCTACGCCCGTAGGGATGGACCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-9.20,-8.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [55.0-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA //