Array 1 194327-191639 **** Predicted by CRISPRDetect 2.4 *** >NZ_LR734824.1 Planktothrix serta PCC 8927 isolate BBR_PRJEB10992, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================================= ================== 194326 37 100.0 45 ..................................... GCCTAATGTGAATTGTTGTAATAGTTGTGATAACGATTATCAATC 194244 37 100.0 42 ..................................... CAGTCTGAAATCTCGCACGATGGTGATTTAGATAAATTTCAA 194165 37 100.0 33 ..................................... AAAAATATTCTGGATTTATGCCATTAGTCCAAC 194095 37 100.0 38 ..................................... TTCTATTCGATGCCAAAATGATTAGAGCTAAAAAATCA 194020 37 100.0 39 ..................................... CCAAACGAAATTTTTCCCACAATTTACTGGGGGTGTTTC 193944 37 100.0 38 ..................................... ATCGAAGAAAAACCTAAGAAGAATCTGGGCGGAAAACG 193869 37 100.0 40 ..................................... CTTTTTAACATTTTCACTGCACAATTCTTAATCGTTAAAG 193792 37 100.0 32 ..................................... TTAAAGAAGTTTTAAACAGTTCAAAATCATGA 193723 37 100.0 34 ..................................... CTCGAAGGCTCGACCGCTTATTTCATTAAAGGAG 193652 37 100.0 34 ..................................... TATATAAAAACTAAGTAAGTATCAATTAATTCGG 193581 37 100.0 38 ..................................... ACTAATTCCTAACGTTAAGGGTAAACAAGGATTATGGA 193506 37 100.0 38 ..................................... AATTTCAACCCCTAGACCTGGAATTTTCAGTCCTACTC 193431 37 100.0 34 ..................................... CAGTAACTTGAACAATCTGGCTTGGCTTCCAACC 193360 37 100.0 33 ..................................... GTAAAAATGATATTGCTACCGCTATTAAAGGGG 193290 37 100.0 36 ..................................... CCCTTCTTGCTTTAATTCGGGCGAATCTATTCCGCA 193217 37 100.0 41 ..................................... ATCTAAAGAATTTCGTAATTTTGATAAATTGTCTCAATCTG 193139 37 100.0 35 ..................................... TTATAGCTGCGATACTCTCTGGATTTCCCTTCTAA 193067 37 100.0 36 ..................................... ATTTTGATGCTGTACAAGCAATCCGATTATTTTATC 192994 37 100.0 37 ..................................... AAGATTTTGAATTTAACTTCATCAGAAATTTTTGCAT 192920 37 100.0 34 ..................................... GAGAGATATTTTCCCAACATTAGAGGTAACGGTT 192849 37 100.0 35 ..................................... CTGCTATCCTTCTGGCTTATGCTGAATTTGTATGC 192777 37 100.0 33 ..................................... TCCTCTTTAAATGTCTTAGGGTTAACTCCCTCT 192707 37 100.0 37 ..................................... ATGCCAGTGAGGAACATCCTTAGATCTATTTGTGAAG 192633 37 100.0 40 ..................................... ACAAAAATAGTTTTCACCTGAGAGAATTTTAAAAAAGCTA 192556 37 100.0 36 ..................................... CCTCTAACTCTGGGGGATTGCACGCTTATATCCCAT 192483 37 100.0 38 ..................................... ATTTTTATGGCTCCAACACTTATTTTAAAAGCCCCCAG 192408 37 100.0 38 ..................................... TTTCGGATAAGATTTTTAGAATCTTATCGAAATTTCTT 192333 37 100.0 40 ..................................... AGATGAATTTCAACAAAAATACATCATCCTTAAGAATTCA 192256 37 100.0 37 ..................................... CACACGCCACAAAAACCTAACAAAAAACCTAAAAAAA 192182 37 100.0 35 ..................................... TACTACAAAATTACTAACCATGAGAAAAAAAGAAA 192110 37 100.0 35 ..................................... CAAAAAATTCGGAGTTCGTTTTTTCATCGGTAAAA 192038 37 100.0 35 ..................................... GATCGCATCCTTTCCAGCGAGGCAAAAATTCCCGG 191966 37 100.0 38 ..................................... CCTGATGGTTTAAGGCATAAATATGAGAGGAATTAAAG 191891 37 100.0 34 ..................................... TCCTACCCCTCTCTGGTTTGGCAAATCCAAATTC 191820 37 100.0 35 ..................................... TTCTGAAAATTCGTCACACATTAAACAACGGTGGG 191748 37 97.3 36 ....................................T GGAAGAAGGGAGTCCTAAAGAACTCACTACAAAATA 191675 37 89.2 0 .....G.............T......A.A........ | ========== ====== ====== ====== ===================================== ============================================= ================== 37 37 99.6 37 GTTGAAATCAGCTATAATCCCTATCAGGGATTGAAAC # Left flank : GGTTATTTGTTATTATTTTCAGAACAATTTGATGCTCTCGGTTATTTAAACAAACACGCTGGGGATTTGAAAGATCGGTTTGCGGTAGAATCGATTACGGGTTCGCAAATTAAACCGATTTTACAGCGCTGGGGTTTTGTGGGTATTGGTAAGGTTAAGGATGTCCTCTTACCTGAAGTGGATTTTATTCTCGTCAGTCCCCATTCATAATTTGAGGGGAAGTTCTAAATTTGGCCCTATCCCCTGAATTGCGCTAACCTATAGCTGTTTGAATTCCCAGGGGTGAAATTCGGGTCTGAAACCTTTATCTATTCTGGGTTTGAAGCCCCTCAGTATGATTAAGAGGTTAGCGCAACTCTTGAAAACCTTATCTGAATAGGGTTTTAGCGTTTTTTTATTTTTACCCCTTGCTAAGTTGATGGCTGAAATGGTATTCTTAGATCAGGTTAGCGCGATCGCACCTTGAAAACTAAATATATCAAGGGTTCCAGAAGCCTGCG # Right flank : CGGAATCAATTTCGTAATTCGTAATTCGTAATTCGTAATTCGTAATTCGCAATTCGTAATTCGTAATTCGTAATTCGTAATTAATTACAATCTAGGGAGAGTATTGAACCCGATAAATACGGCCATTACTTTCCTCAGTAAAAATCAAACTCCCATCGGGTAAAACCAACAACCCCACCGGACGACCCCAAGTTTCAGGGATAGAAGCATCCACTAAAAAACCCGTTAAAAAATCTTGATAATAGCCTTGAGGACGACCTTGATTAAAAGGAATAAAAATTAATTTATAACCCGTCCCTTGGTTGCGGTTCCAACTTCCTCGAAAAGCAGCAAACGCCCCATTTTTATAGTTGTCAGGAAAAGTATTTCCATCATAAAATTGTAACCCTAAAGCCGCCGAATGGGCTTGAAACAAAACATCAGGTTTTAAGGTTTTCTGGACTAAATCAGGACGAACACTCTCACCATTTTTAACATGACGCGGATCAAGATTATTCGGT # Questionable array : NO Score: 9.24 # Score Detail : 1:0, 2:3, 3:3, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAAATCAGCTATAATCCCTATCAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.16%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.50,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [68.3-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,4.91 Confidence: HIGH] # Array family : NA // Array 1 34530-35522 **** Predicted by CRISPRDetect 2.4 *** >NZ_LR734832.1 Planktothrix serta PCC 8927 isolate BBR_PRJEB10992, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== =============================================== ================== 34530 37 100.0 40 ..................................... GTACAATCCCTTAAACTTCTTGGTTAGGGGAATTGACCCT 34607 37 100.0 41 ..................................... CTAAAGCAATAGAACCAACACCGATGATTAAGGTAGAAGCT 34685 37 100.0 43 ..................................... AACAAGTGGTGTTGCTCTTCAATTCCCCACTGTCGAAAGTAAG 34765 37 100.0 41 ..................................... CGAGCGGGTGTCAGGTTGGAGGTTGATCTGAATTTCGTTTG 34843 37 100.0 43 ..................................... GACGTAACAGGAGTAGATGTCGATGCTTTCCCAAACTTCAGGG 34923 37 100.0 43 ..................................... CCCAAAGCCTTGACTTTTCAGACCCTTCATAACTTCTTGAGCA 35003 37 100.0 42 ..................................... TTGGGAGTGACTCAAGAGTTTCATCAAGAATTTCAATAAGCT 35082 37 100.0 43 ..................................... TCCTGAAGAACCTTGTTAGGATTCTTCATTTCTGTCCAAGCAA 35162 37 100.0 41 ..................................... AGTGGAAGAATTGCCGGGCTATAGAAACCTAAGGCATCACA 35240 37 100.0 42 ..................................... TATTACTCATGAACATAAGGAAAGGCATAGAGGTATGCACAG 35319 37 100.0 47 ..................................... TTAAAGTAGCAAGGAAGTAACACTGATCTTCATTAAGGTTACAGTAT 35403 37 100.0 46 ..................................... CATACACAAAGCGAAACTCGGGCTCATACCCGAACAGAGAAACAGA 35486 37 97.3 0 ......................T.............. | ========== ====== ====== ====== ===================================== =============================================== ================== 13 37 99.8 43 GTTAGCTTCTACCTTTTCCCCGCAAGGGGACGGAAAC # Left flank : TCCAAGTCTTAGGTCGCTTTGGGATTCGGGAAATTGCTCGCACGGGTAAAATTGTCTTGGTGCGGGAGTCGGGTGTTAATACGGAATTCCTCAAAAGTCAAGCTTCTGTTGAAGCTCGATTTTAACCTATTATTAATTAAGCAATATTACGGTTTCTCAGATTTATAGGACGTTTTAACCTGTATTTAGACGATAAGTTAGGGTTAAACGTCCTATTTGATTAGGTTTGATAGATTTGTAATGTTTTGTAAAATTTTCTCATTCGGTGTCGCAGGAAGCTAGAAAGCGTGATTCCATCAGGGATAAAGCTTTTTTGAGATTTTTTGGGATTGGGCGCTTGACTCGTTAGAGAAATTCCGTTATAGTCTTAAATATGGAGGATTTTACGAGTTGAGGTAGCTTAAAATAGCCTAATTAACTTTTTATACAACCCCTACATCCGTACTCCCTCGCAAACGCACTTTGAAAACTTCATAGCGTCAGGTTTCTATAAGGGTAGG # Right flank : CTCATCTTCGTAAGTATAGGGTCTATGCTTGTTTTTGAAGAAATGTTGATTTTTAAGTCATTTTTAAAAAAAATTGTTAGAATGGAAGCAGGTGAGCGATCGCATAGTGTTGAGGCTCATCGGTTAAAGTTATGAACATAAACGTGATGAATGAACAGGATTGTTCAGCCGTTTATAACGCGCTGATAGAGATGCTGAGTTCTATAAAATTGGGGTGGGTAACTGAACAAGTTGCTGAGGTGATTAGCGCGGGAAAAACCATTGAAGAATTGGTATCCGGTCGGAAATCTCCTGATTTAAAATTAAATTATTATACACCCCAAGAACAACTTTTAATTTTAATTAATGCTATTGAGAAATCGGTCATTAATACCGCAGAAATAGAAACAGAAATCATGGATATTTTCAGCCATGAAGCTCCAAATTCTGACTTAAAACCGGAGTTGAGATTTACCTCGTCGGTGGAGGGGAAAGGCAAACTGTTTAAATATAGTGTTGAA # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAGCTTCTACCTTTTCCCCGCAAGGGGACGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [8,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-9.20,-8.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.64 Confidence: LOW] # Array family : NA // Array 1 135435-136851 **** Predicted by CRISPRDetect 2.4 *** >NZ_LR734879.1 Planktothrix serta PCC 8927 isolate BBR_PRJEB10992, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================= ================== 135435 37 100.0 36 ..................................... GCAACGACTCCGAAAAGTAACAAAGATGGGGGCGGC 135508 37 100.0 33 ..................................... TGGACTGGCCGCAGAAAAACTAATGTATTGATT 135578 37 100.0 35 ..................................... AAGAATTTCTCTTGCACACAGAGCCAACTCCTACC 135650 37 100.0 32 ..................................... CTTCCAACGAAGGCGGAGCCATTTTTTATCGG 135719 37 100.0 41 ..................................... CAGTAGAACACTGGACTGCTTATTTATCAAATTTTCTAGGT 135797 37 100.0 37 ..................................... CTGACTCTGTGAAGTACAGTGTTTTGATCGTATAGAA 135871 37 100.0 35 ..................................... AAACACGACCTGCTAAAGGCTGCGGTACGGGGTAT 135943 37 100.0 34 ..................................... TTATTATGTAAACACAAGCCCATTACAAGTGTTG 136014 37 100.0 36 ..................................... TCCTTAACCGTATTTTTGTAATCCTGCGAAATATCC 136087 37 100.0 36 ..................................... GTAATTCTGTTGTTGCCATATAATTAAGATATTGCG 136160 37 100.0 35 ..................................... TTGATTTTGTTGATGTTTAGGGCTATAAAAAGAAA 136232 37 100.0 34 ..................................... AAAACATTAGCCCTGATTCCACTCCACAGAATCA 136303 37 100.0 34 ..................................... CTATCTGCCGCTTCCCCGATTGAATGAGAGTTTT 136374 37 100.0 37 ..................................... GGAATTGTGGCAACCGGAGTAGGTATCAGCAAATGGG 136448 37 100.0 38 ..................................... AGACAAATCAGCTTCGGCAAACCAAGTACCTTTAGTAA 136523 37 100.0 35 ..................................... TAAAGCTATTCTAGCCGACGCTTGCGGGGTCATTT 136595 37 100.0 34 ..................................... TCTGATGAATTTTGAGAGACTTCTGACGAGATTA 136666 37 100.0 34 ..................................... AAAATCCGTTTGCAGTCGCGGGGGTCATCCCCTA 136737 37 100.0 41 ..................................... TTATTACAACCGACTTGCTTTATTCAATAAAAATTGAGGTT 136815 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ========================================= ================== 20 37 100.0 36 GTTGCAATAACCAATAATCCCTATCAGGGATTGAAAC # Left flank : GATTTATCAAAACACCAATCATGCTGAATCTTGGTATAGTCGGGGGAATGCTTTTGTAAACTTAAACCAATATCCAGAGGCGATTTCTTCCTATCAAAAAGCGTTACAATATCGTCCTGATTATCGGGAAGCAACTCAAGCCAAACAACAAGCTGAAAAACAACTTCAAGAGCTTAATACAAGTCCCAATTCAACGAGTGAGACAGGCGGTTAAGTTAGGGTCTGGAGTTTACCCAGATATCCTGTTGTTGGCGACAACCTGTAGCTGTTCAAAACTGATGGAGGAATTTTGGGGCTGAAACCGTTGTCTGTTGAGGGTTTGAACTGTGTTGATTGTCTTTGGAGGTTGTCGTAACTCTTGAAAACCATACCATCCAAGAGTTTCAGCGTTTTTTTGTTTTTGCCTCTTGTCAAGTCGAGGGCTGAAATGATATATTTAGATCAGGTTGCCGCGATCGCACCTTGAAAACTTCATAAATTAAGGGTTTCAGGAGCCTGCG # Right flank : CTCTATTATTAAAATCCATTTAATCCGTGTTCTAAAAGGGGGAATTGAAGCCCTGAAGGGCTTACTACTGTTGGGGTTGAGGAATCAAATAAATTAAACCAGAAATTAGAGTGAATCCGACAGAAATCCAGAATAAAATTAAAGTATAAAATTGCCAAACTTCAGGTAAAGGAGCAATTAAAAAAGCGATCGCTAAAATTTGACTCACTGTTTTTAATTTACCCCAAATATTCGCCCCAGAAATTTGAGTTTGATTCACCCGCCATCCCGCAATTGTAAGTTCCCGTGCTAAAATTAAAAAGACTCCCCAAGCGGGAATTTGTCCTAATTCTATAAAGGCTAATAAAGGCGCGAAAACTAATAATTTATCAACCAAAGGATCAAGAAATTTTCCTAAATCTGTGACTTGATTGAGTTTTCTAGCTAAATATCCATCTAACCAATCTGTACTCGCGACAACCAAAAAAATTCCTAAACAAATCCAACGATTAGTAACCGTT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCAATAACCAATAATCCCTATCAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.16%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.20,-7.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [51.7-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.64 Confidence: HIGH] # Array family : NA // Array 2 194088-196490 **** Predicted by CRISPRDetect 2.4 *** >NZ_LR734879.1 Planktothrix serta PCC 8927 isolate BBR_PRJEB10992, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== =========================================== ================== 194088 37 100.0 39 ..................................... ACTCATCCACGCCGCCAAACGCCCCCTCGGTAAAGTTGA 194164 37 100.0 37 ..................................... TCATTTTTATATTTTTCCGTGCATAGGGGGGACGGAT 194238 37 100.0 33 ..................................... TAACTCCCGTCAATGCCAACAAAGCCCCCTACA 194308 37 100.0 40 ..................................... CAGAATTCCCCTGAAAAAGCACCCCATCCAACTACCCTGA 194385 37 100.0 42 ..................................... ATCATGATGTTCGTCAATTTGCCTTAGAAAATCAGTGTATGA 194464 37 100.0 33 ..................................... AAGTTAAGGTCACGACGTAAGAATTAGTCCCAC 194534 37 100.0 34 ..................................... CTCATAATGGATGAGTGTGGGCAACTTTTCCATA 194605 37 100.0 39 ..................................... TGTATGTACAGCAACATTGAAACACTTGCGTCCATTATT 194681 37 100.0 37 ..................................... AAAAAATTTGGGAAAAACGTCATGGATGGCGCTTTCG 194755 37 100.0 38 ..................................... CTAAATAGTCTGACCATTCCGGCTCACGACATTGAGTT 194830 37 100.0 34 ..................................... AGATTGGAGTTTGGATCAGGGATAGGATGTTCCA 194901 37 100.0 36 ..................................... GTTCTATCCCGTCCGAGTCTTCCCCGAACATCAAAA 194974 37 100.0 36 ..................................... CAAGCATTTTATCGTTAACAGGGATGTTAAAGCACC 195047 37 100.0 37 ..................................... AATCTGAAAAGATGATGAGAATCTATGATGCGGGCGT 195121 37 100.0 34 ..................................... TACCTATTCGGGTGCACAACACTACACAGACAAC 195192 37 100.0 40 ..................................... GTACCCGGATACAGATGATATCGGAAAAGCAGTAAATGAA 195269 37 100.0 35 ..................................... ATCTAACCTAACTACACCTGTAGACAGTCCAGTAG 195341 37 100.0 43 ..................................... AACCCAACTGTTAAGAGTCGCTTCTTTAATACCCGTCCTTCTG 195421 37 100.0 34 ..................................... CAGAAAAATCCGCTTTACAACTCCGGGGTTCAAG 195492 37 100.0 34 ..................................... CCTTTCACAGTGCAGCGAGCGCCCGAAAGGCAAA 195563 37 100.0 34 ..................................... CAGAAACAATTGATTTCATCGGGCCGTAATTGGA 195634 37 100.0 34 ..................................... GCGACACTTCCGGCTAACCAAGCTGCGGGATCTT 195705 37 100.0 40 ..................................... ATGGGAATAACAAATTCTGCTACAGGAATATTAAGCGGGT 195782 37 100.0 41 ..................................... GAGGATAAAAAGTTAAAAGGATTCTTAGAGGGATTTTTTGA 195860 37 100.0 35 ..................................... GTCCTTATAGCTATCGCAAAAAAAATTCTGTTAGT 195932 37 100.0 36 ..................................... TACAACACTGAAGGCAAAAGCCATCATATTTATGTA 196005 37 100.0 43 ..................................... GGAAAGCAGCTGCTTCTAGTAAATTTGCTAACGGCTCTAAATC 196085 37 100.0 34 ..................................... GGAAATGCAAAATTAAACCCGCACAAATTCGGGG 196156 37 100.0 35 ..................................... AATAGAAAGGATGCGATCGCGATAATTCTTTTATT 196228 37 100.0 36 ..................................... TTCCGTATTAATTGATGATACAGCAACCAATAATTA 196301 37 100.0 39 ..................................... TACGATTCCTCTTACAATATTGACACAGATTTGTCAATC 196377 37 100.0 40 ..................................... CCGATATTGCAAAAGAAAGTATTTCCCGTAAAAATACCAA 196454 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== =========================================== ================== 33 37 100.0 37 GTTGAAATCAGCTATAATCCCTATCAGGGATTGAAAC # Left flank : GGTGGCGATATTCCCCTGAGTCCGACGGCTTTGGGATTACGCTATCGGGTTGTGGTGGAAAGTAGTAATGATACTGAATTGCGTCGGATTCGGTCAATTGTCCCAGAAGCGTTTCAAACGGTGGTACAAGGGCGACAGGTGATTCAAGCGGGAGCTTTTCGAGATCAATATCGGGCCAATTCGCTATTACAACAGTTAACCAGTAATGGATTAAGGGCCAGGATTGAATTGATGAATTAGTCTCGTTTGTGGCGACAACCTATAGGTGTTCAAAATAGATCGGCAAAATTAAGGGCTGAAACCTTTGTCTATTCTGGGTTTGAACTCTCTCTTTGTTTCAATGAGGTTGTCGTAACTGCTGAAAGCTTGATTATAAGCGGGTTTTAGCCTTTTTTTATTTTTACCCCTTGCTAAGTCGATGGCTGAAATGGTATATTTAGATCAGGTTGTCAGAATCGTACCTCGAAAACTAAATATATCAAGGGTTTCAGAAGCCTGCG # Right flank : CGGGAGCTAAAATTCATAATTCGTAATTCGTAATTCGTAATTCGTAATTCATAATTCGTAATTCGTAATTCCTTTACTGGGATGGGTGAAGAAGCCCTGAAGGGCTTACTACGGGGAAGAAATTTTATCCTTCGGAACGTTTATTCATCTCAAATTCTTCTAAAGCGGCTTCAGAATTGGGTGCTGAACTTAACCAAAATTGAAACTCATCCGCAAACCGATGATTTAAAATAGCATCTCGAATGCGTTGGGTAAAACGAATTAATTCGGTAACATTATGAATCGAGATTAATGTATAGCCTAATAGTTCCTTCGCCCGGATTAAATGACTAATATAAGCCCGACTAAAATTTTGACAGGTATAACAGGGACAGGTTTCATCTAAGGGTTGAAAATCTTCTCGAAATTGAGCATTTTTTAAATTCAATCGTTCTCCCTTAATTAACGCCGCTCCATGACGGGCTAAACGAGTGGGAATCACACAATCAAATAAATCCACC # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAAATCAGCTATAATCCCTATCAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.16%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.20,-7.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [58.3-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.64 Confidence: HIGH] # Array family : NA // Array 1 99645-101495 **** Predicted by CRISPRDetect 2.4 *** >NZ_LR734880.1 Planktothrix serta PCC 8927 isolate BBR_PRJEB10992, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================================= ================== 99645 37 100.0 37 ..................................... ATCAGCCACTCTCTATTCAATTCCCGAACGGAACGGC 99719 37 100.0 35 ..................................... TTTTTCAACCATGATTTACCCCCAATCCGGGTATT 99791 37 100.0 36 ..................................... CTGTGAGAAATGTCGCCGCCCTTGCCGTAAACCCAA 99864 37 100.0 34 ..................................... AGGGGGATGAGTATTTAACCCTTCTAACCCTAGT 99935 37 100.0 40 ..................................... ATAATGAGAAAGGTACAAAATTTCTTAATGTAAAACTATG 100012 37 100.0 35 ..................................... CCTATTTTAATCAACCTTTATCAATAATCCCATTA 100084 37 100.0 35 ..................................... TATGATTCTTCTTATAATATTGACACAGACTTATC 100156 37 100.0 45 ..................................... CGGCCAGGGATAACGCGATCGCACCCCTTCTTATCCCCATTCCCT 100238 37 100.0 35 ..................................... TACACCCCGTCAAACTACAGAATTGTACAAAGCTT 100310 37 100.0 34 ..................................... ATCCCTATTAGTCAAACTGTAGAGATCGCTGTTA 100381 37 100.0 33 ..................................... TACAATATTATTATTAATATTAATAGACTGAAT 100451 37 100.0 33 ..................................... TCCCCATATTCCAGGGAGCTTGCCCCCCACCAA 100521 37 100.0 34 ..................................... ATAACAAGGGAGATATTTCTCTATTAAGTCATCT 100592 37 100.0 34 ..................................... CAGGGATATCCTCAACAATTTGGGTTATAACCAA 100663 37 100.0 35 ..................................... GGAAAGGCGATATCAGCCACGCCATCAGCATTAGT 100735 37 100.0 39 ..................................... TATCTTTTAGCCGCCCAACTCCATCAATAACTAAAGATT 100811 37 100.0 33 ..................................... TTCCTATTTCTTTAACCTTTTTGCCCTTGATTT 100881 37 100.0 39 ..................................... ACTTACTGCTGAACAAACTGATAGGCCTCTAGGTTGAAA 100957 37 100.0 33 ..................................... ACTTCCAAAGTTTCGATTCCCGCTCCTTCCATC 101027 37 100.0 33 ..................................... GCCTAAAGTTTGGGAGGAATATTATAATATTTG 101097 37 100.0 33 ..................................... CAATATGCAACGAACCACTAGACGTTGATTTTT 101167 37 100.0 36 ..................................... TGCCTAAGTGCTTTTTATAATAGAGGATAAATTCAA 101240 37 100.0 33 ..................................... ATCATTATTGCCATCTAATTCGACAATAATATG 101310 37 100.0 34 ..................................... GGGTTAGTCAAAGCGGCACCGAGTCCATTCATTT 101381 37 100.0 41 ..................................... ATTTGCAAGTCTTTTCCTGTAAAACGAAACCCGTCTTTCCA 101459 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ============================================= ================== 26 37 100.0 36 GTTGAAATCAGCTATAATCCCTATCAGGGATTGAAAC # Left flank : TAACGGTTGAAGAACTGCCAAAACTCAAACGATATCAAGAGAATGAATTTATTTTTCCCTATCCTTTGAATCCTCTGGATGTGATGTTTACCCATCAAGTTTTGAGTTATGACACGATTAATATGCCTCCAGTTAGTTTAATTCGTAATGTCAGAATGCGAGGGGAATATTACACCGTTGAAGGTCTAAAATTGCAAATTCCAGCCCAAATGCAATACCGTTTTAACTAATCCATATCTATCTACCCGTAGGGGCGAGGTCTCCTCGCCCAGTGAGTTACGATTTGGGCAGGGTTTGGGCGGGAAAACCTCGCCCCTACAAAATCTTGAAAATCAGATAGGGGTTTGTGTTTTAAGCAAGGGTTTGGGCGGGAAAACCCATCGGTGTCAACTTAAGTCTAAAAGCCTTGAAATAAATTTCAGGCTCAAAGCTAAAACCCGTTAAAACGGGTTAATGAAGAATNGCGATAACATCCTTCTCAAACCATTTAAAATTCTGCT # Right flank : CTATCGGACTTTTTGGGTTTTTGGAGCCAACTAATTAACTAAATTGCAGTAAAGCGAGAATTGGTTTCACACTTTCGGGGAAAATAACGACGAGACTCCCTGGGGTAGCTTCAGCAAAGGCGGTTTCAATGGCTTTCATTTCTTTGAGAATAATCTCACAGTCAAAATCAGGATTTTCCTGCTGAACTCCAATCTGAATATATTTAGCCACATCTCCCCGTTGGCTTCCGCGATTATCATCATCTTCCTTAATAATAATCCGCTCGAACATCTGCGCCGCTAACCGTCCTAATTCAATAAAATCTTCGGGACGGCGATCGCCCGGTGCACCAACAACCCCAATGCGTTTACCATCGGGCCAATTGCGAACAAACTCCAGAATCGCTTGAAAACTAGCTCGATTATGGGCATAATCTAATAAAACATGGAAAGAGTGGTAAGGAATTAAATTCATCCGTCCAGGGGTTTGTTCCACCGACATCTCAAACGTCCGCAACGCC # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAAATCAGCTATAATCCCTATCAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.16%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.20,-7.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [66.7-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.37 Confidence: HIGH] # Array family : NA // Array 1 535558-534422 **** Predicted by CRISPRDetect 2.4 *** >NZ_LR734877.1 Planktothrix serta PCC 8927 isolate BBR_PRJEB10992, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================================================================= ================== 535557 37 100.0 35 ..................................... GCTGAATTTGACGAACCGACAACCCCCGACGCTCG 535485 37 100.0 37 ..................................... TCTGACTCGATGAAACCTTGTTTAATGGAACTACCGT 535411 37 100.0 37 ..................................... AGCATATAAAGCCTTTCCACCGTCGAGGGCGACAAAA 535337 37 100.0 41 ..................................... TTTCTGGGATGATGCAATTCAATCTTTAAAACTAATCACTT 535259 37 100.0 39 ..................................... AATGTTGAAAAAACTGCGGGGGGTATTTTTGGATGGAAA 535183 37 100.0 36 ..................................... TAATCCCTCATCGGTAGCGAAAGGATTTACCAGTGA 535110 37 100.0 43 ..................................... AACAGTGATTTTAAAACCCATTGGGTTCCGCCCACAATTAAAT 535030 37 100.0 41 ..................................... ATTTCAATTCGCATTCCCAAGGGAGAATGTTTCAATGTTTA 534952 37 100.0 38 ..................................... ATCAATGGCGGTCAATGGGGCGATTATTATGCAGACAA 534877 37 100.0 35 ..................................... TATCTATTTTAGGAGCAGGTGCGATCGCACAAGTT 534805 37 100.0 37 ..................................... ACGCCCAAAATACCAGCAAAAACTGAGATTAAATCAC 534731 37 100.0 36 ..................................... ATATATATATCCTTCAGCAACGCCTAAGACTTTCAT 534658 37 100.0 37 ..................................... GGCTGAAGAGAGTCCTAAAGAACTCACTACAAATATA 534584 37 89.2 89 ...A..............T.....T.A.......... CGGAATCAATTTCGTAATTAGTAATTCGTAATTAGTAATTCGTAATTAGTAATTCGCAATTCGTAATTCGTAATTCGTAATTCGTAATT 534458 37 86.5 0 A.......A.AT.....C................... | ========== ====== ====== ====== ===================================== ========================================================================================= ================== 15 37 98.4 42 GTTGAAATCAGCTATAATCCCTATCAGGGATTGAAAC # Left flank : CATTACAGGGTAGGCTTTTCCAGATTTAGGGTTCATAATAAATAGAGGCAACACAAAAACTATCCTTTCTGGAGACTCAGTAACAATGAATACCGACTTGACTTATGGATTATTACTGGCTTTGATTAATGGCATGATTTGTCTGTCTTTACCTGCGATCGTGTCCTATATTCAGGGTCAACGCCGGGATCATGATCAGTCATCCGTGATCACTCAGCAACAAATCTAATGAGACTCAACAATTCTGAGTTGCGCTAACCTGTAGGTGTTCAAAATAGAAGCAGATTTTTAGGGTCTGAAACCTTTGTCTGTTCTGGGTTTGAAGTCTGTTTTGGCGGAAATGAGGTTGGCGCAATTCTTGAATCCCTTATCTGAAAGGGCTTTTAGCGTTTTTTTATTTTTACCCCTTGCTAAGTCGATGGCTGGAATGCTATATTATGATCAGGTTGTCGGAATCGCACCTCGAAAACTAAATATATCAAGGGTTCCAGAAGCCTACG # Right flank : AAAGAAGTTCCTAGAGTTCCCTGATAGAGATTATCAGTTAGTAGGTTTTTTGAAATACCTGTATTGCAACTATTTCCAACCTGCTCGATCCATAATTTGAATCGCCTGGGAATTAAATTTCCCGTAGGCTGCAACATTCATCGGATCACTCTTAAACGTGCCAAAACTCGCTAAAACTGGAGACACAGAAACACCCGCAACAGCCGGATATTCAAAAGCACTTTGAGCAAAAATCTTTTGCGCTTCAGGACTCGCTAAATACTCTAAAAATTTAATCGCTCCCGCTTTATTTTTAGCTGTTTTAATCACTCCTGCACCACTAATATTCGTGTGGGTTCCCTGGGCTCGTTGGTTAGGGAAAAATAACCCAACTTTACTCGCAACGGCTTTATCTTCAGGTTTCTGAGAAGCGACTAAACGCGCTAAATAATAAGTATTGGCTAGGGTTAACTGTCCAGCACCCGCCGCCACCGCTTTAATTTGAGAAACATCATTTCCTT # Questionable array : NO Score: 8.86 # Score Detail : 1:0, 2:3, 3:3, 4:0.92, 5:0, 6:0.25, 7:-0.31, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAAATCAGCTATAATCCCTATCAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.16%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.50,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [66.7-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,4.91 Confidence: HIGH] # Array family : NA // Array 1 212102-213728 **** Predicted by CRISPRDetect 2.4 *** >NZ_LR734878.1 Planktothrix serta PCC 8927 isolate BBR_PRJEB10992, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================================================================================================================================================================================================================= ================== 212102 37 97.3 32 ..........................C.......... CCACACTGCGAAGCATTAACAATTACGAGATT 212171 37 94.6 231 .........T.................A......... AACCCTTAGCTGTTTTTGGGTGTTTATGCCAGAACCCTTATTCTGTAGGAGTTCTGGTATTTTTTTAAAAAATAGGTTGGCGCAATTTGTGTAAGGCTTAATCTGAAAGGGATTCAAGGATTTTTTTTGAATACAAACTTGACAAATAATGGGGAGATTTGCTATTATTAACTTAGGTTGGCGGAATTGCACCTTGAAAATTAAATATCACAGGGGTTCCAGCAGCCTGCT 212439 37 100.0 35 ..................................... TTGATCTCTCTGTACCCGTTATCTTCAGCTATAAG 212511 37 100.0 35 ..................................... AGGATATTATGATGCTTTAGAGGCTCTACTGGAAG 212583 37 100.0 34 ..................................... TGCCTTTAGCCAATGACCGCTTTACTGGGAAAAG 212654 37 100.0 35 ..................................... TCATATTGCCTCACGCCCGTAACTAGCGGCGACCC 212726 37 100.0 41 ..................................... TTTACCGAGCCCGACGTAAAGGGTATTAGGGGGTGTGTTGA 212804 37 100.0 34 ..................................... AACATAGTTAGAAACTCCCTCTACAACTTGTTTA 212875 37 100.0 35 ..................................... AAGTTCGACTCTATTGAACAGAAATATCAGTGGCA 212947 37 100.0 39 ..................................... AACTTAGGATTCAATCTAGCCTGAGTTGCCAGATTAGAA 213023 37 100.0 36 ..................................... GAATTTTATCTCAAAGATAGATGTGATCAAAAGATA 213096 37 100.0 34 ..................................... CAATATCAACAGGAAGAACGTCAACAGAAACAGA 213167 37 100.0 34 ..................................... CCTCTAAACGCCCTAACCCAACAACTCCCATGAT 213238 37 100.0 37 ..................................... ACCAAGTACAATTGATTAGCTTACGGGAGGCTTTAAA 213312 37 100.0 35 ..................................... CAGGTGCTTTGATGTCCTTTCGTGGAGGGTGTCAG 213384 37 100.0 35 ..................................... AAGTTTTTAACAGGAAGATCTAACTCCTTAATCCG 213456 37 100.0 55 ..................................... GATTGAGAATTAAAATAATTCGGTTGACCCCATCATCCTCTAAAATAGTAGGGGT 213548 37 94.6 35 A.........................C.......... CAGTTTACGTCAACAACCCCGTCAACTTCTACAAC 213620 37 94.6 35 ..............T...........C.......... CAGTTTACGTCAACAACCCCGTCAACTTCTACAAC 213692 37 91.9 0 ..............T...........C.........T | ========== ====== ====== ====== ===================================== ======================================================================================================================================================================================================================================= ================== 20 37 98.7 47 CTAACAATCCTCAGCAATGGGGATTGAGAATTGAAAC # Left flank : TTCGGATGTTTGGGGCGGTGCTTAATACAGGTTTAAATGCGGGTCAAGTTTGGGGGCCATTACAAATTTCTTGGGGGCGCTCTTATGATCCAGTTTTGCCTATTTCTGCTACTATTACCCGGTGTGCGGCGACGGAAGCTAAGGAAGGAAAGGATAACAAAACTATGGGACGGAAAGAGTTAATTCCCTATGGATTGTTTAAGATTGAAATTCATTATAACCCTGGTTTGGGTGATAAGGTTTCCAGTGATGATCTCAAATTGTTCTGGGAATCATTATTAAATTGTTGGGAATTTGATCGCAGTTCCTCCCGTTCTTCAATGAATTGTCGTGGCTTGTTTATATTCACCCACGATAGCAAATGGGGAAATGTTGCTTCTCATAAGTTGTTTGATTTGCTGTCGGTTAAATCCATTGCTCCCACACCTCGAAGTATTAATGATTACGAGATTAATATTGATGGGGATGTGCCGGACGGTGTAACTTTGTGGAATAATTAG # Right flank : TAAACAAATAAACAAACAAACAAACACTGAAAACGATATAGTAAGAGATTGAAATTCTTAACGGTTTTTGAGATCCTATGTTCACCGTAGACATTATTGTTAAATCCGTTGCCGTCCCGTTGTCCATTCAAAAAAAATCTGCCGAGGATGCAGAAGCGGTTTACAATCACATTTTAGAAGTGCTGCGGGGAGGAACAGCGCAGATCTTAGAATTTAGTTGCGATAAAATGACCGAGAAAAAACTGGCAATTCTCAGCAGTGAAATTTCTGCGGTACAAATTTCTGACAAAATGGGGGGAAATGCGGCCGGAAGAGCCCCTGGTTTTGTCGGTGTAAAGGCAGAATAGAGGAAACTACAAGGAGCATGGAATCTTCCAGTCCAGCGATACGGGTACAAGAACTATGCTTTAGTTGGCCAAGCGGGGCACAGGTGTTAAAATCCTGTTCCCTGGATGTTCCTAAAGGAGAGTTTTGGATGCTTTTGGGAACTAATGGCAGTG # Questionable array : NO Score: 5.14 # Score Detail : 1:0, 2:0, 3:3, 4:0.94, 5:0, 6:0.25, 7:-1.05, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTAACAATCCTCAGCAATGGGGATTGAGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:59.46%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-9.30,-5.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [3-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [60.0-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.27 Confidence: HIGH] # Array family : NA // Array 1 25814-25089 **** Predicted by CRISPRDetect 2.4 *** >NZ_LR734869.1 Planktothrix serta PCC 8927 isolate BBR_PRJEB10992, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== =========================================== ================== 25813 37 100.0 41 ..................................... TCCAGTTTAGCAGCAGATTCAACCGCTTCGTTCCACATGTC 25735 37 100.0 43 ..................................... CAGATTGGAGAACGTAACACGTGCCAACGAGGTGGCAAAGTTG 25655 37 100.0 41 ..................................... GGTGTTCCCCACACACCTTCAGCTTTGTCCACAGATTGGAC 25577 37 100.0 40 ..................................... TCTTGACTGAACATAGCACTCAGTTGCTGATGCAGTGCAG 25500 37 100.0 43 ..................................... CATGCAAACATGGGACAGTGACCGATTGGTTTAAGTACCTGAC 25420 37 100.0 31 ..................................... TTATATACTATCCTTTTGTCTTTCTCTTGTA Deletion [25353] 25352 37 100.0 38 ..................................... GGTAGTCTTTGAAGTGGTATAGATTTATACTTACTTAA 25277 37 100.0 35 ..................................... CCCTCAAAATCTACATATTCAACCTTTACGTTGAA 25205 37 100.0 43 ..................................... ACATCTCCCACCTCTAGGTGGGGATCGAAATAATCCTGTGCTA 25125 37 94.6 0 ................................A...G | ========== ====== ====== ====== ===================================== =========================================== ================== 10 37 99.5 40 GTTATTTCCTATCTTTTCCCCGCAAGGGGACGGAAAC # Left flank : CTAGAACAGCGTTGGTTGAAGGTGTTGAATTTGGCGGAGGATAGTTTGCGGGTGTATCCCCTTGATGCGATCGCCAAGCAACAAACCAAGGTGTTTGGGAGTGATCCGCCCTATGAACCGCCGGATTTTCTGATTTTGTAAAGAAAAGTTGAGTTTTCTCAGGTTTTTGGGGTTGGTTTTTGCGGTTTTGGGCAGGAATTAACCTCAAATCCTGATGGAGATGGAGTTAACAAGTTTGTAACGTAAAATTACGGTTTTTAAGGTGATGTCGCAGAGAGCTAGAAGAGGCTAGAAAAAATCTGGTGGAGATTTTTAAGGCTTTTTTGGGTTTTTAGGGTTGACTCGTTAGAGAATTTCCTCTATACTTTCAAATATCAACAAATTTGAGAGTTTTCCTATTGGAAAAACCACTGAGTTTGTTTTGATACAGGCTATTAATCCGTAGCCTCTCGCAACAGCACCTTGAAAATTCGATTGGCTATAGTTTCCAAAGCGATAGG # Right flank : CATCAAATCTAACAACCCACACTCTTAAACTAATCGCTATTCCTTGTAATTCAACAAGCGATCGCAAACCTAAAACCCTCACTCACTTTCCTCAACAGCCCCCAACTCCTTCAACGTGGCAATAACCTTTTCGAGAAGCATTTGTTAATATTAAATCTCCCTAAATTGCCCTACTCAATTGCTAGAACGATTTAAGTAAGCATAAGCCATTACCCGCCAGATCTCTAACTCTGGCCAAACCCAAGGTTCCTTATAGGTGCGACTTTGCTTTGAATCATAATTTAAACAATTCTGCCAAGCGGCTTTTGCCCCTAAATTATCCCCTTCCTCCTCTTGAATTTGAGCTAATAAACAATAAGGCGCAGCGCGATCATTTGATTCCTCAATAGAACACAATAAATACTGTTTTGCCCGTTCATTCTGATCAAGTTCAAAATACGCCCATCCTAAATTTTTATATAACGAAGCCTTAATTAATGGCTCCTTAACTCGATAATTTC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTATTTCCTATCTTTTCCCCGCAAGGGGACGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.35%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-8.40,-9.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [63.3-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.78 Confidence: MEDIUM] # Array family : NA // Array 2 45562-45229 **** Predicted by CRISPRDetect 2.4 *** >NZ_LR734869.1 Planktothrix serta PCC 8927 isolate BBR_PRJEB10992, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================== ================== 45561 36 100.0 33 .................................... GTTGAATATTGAAACCCTCCTCAACTAAAAAAT 45492 36 100.0 37 .................................... TGAAACAGTAATTGAAACAAACAACGCTTTTTTAAGC 45419 36 100.0 42 .................................... ATAAGGTAAATTGCTACCTGAATCCCAATTTTACGAAAGAAC 45341 36 100.0 41 .................................... TGTTTACTGAAAAACTAAAGCAGAGCTGGATTAACCAAACT 45264 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ========================================== ================== 5 36 100.0 38 CCCTTCCGAAGGGTTTAATTCGGATTAGTTGGAAAC # Left flank : AGTGTTTTATTAGCTTGGAGGAAATGCGACAATTGCATCAAAAGGTGAAAAAGTTGGTTTTACCCCAGGAGGATAATGTCCGTTTCTACTGGATTTCTAATGATGCTCTTTCGATTGTTTTAACCATTGGCAGTCAAAAGCCTGAACCTCCTCCTCAATATTATGTGATTTAGGGGAGTTCTGGTGATCCGATGTTCTGCCCTTGGGGATGGGAAGGTGCGTCGATAGGGTGATTTCAGGTATTGTTGAATCGTAGAATAGGCTTAAATTCCTTTCGGGTCAGGGTTTGAGCGGATTAGGAGGATAACGCTGGGCTAATCGACGCACCTCGCCCAACTCCTGAAACCCCTATGTTTTCGTTGAGGTGCGTCGAAGCTTTACACAGAGGGTGTTTGAGGGCTATGAATTCGCTGTTTTTGAGTCATGATCTATGGTATATTCAGGGGGTGCGTCGATTTGAAGGCTGTAGCTCCCTCTGGGTATACCCTCTGCGGCGAACT # Right flank : CAGCAATAGCTACTAGAAAACCGCCTACACTCAAAACTCTGTTTGTGTAGGTGGTTTTCATTAAAACCCAAAATAAATCATCGCTTAATCTTTATAAAAACTCCCTAACTTTTGAATATCCTCAGCCATTGTTTTTCTTAAATTCCAAGGTAACAATACCTCAACTTTCGGCCCCCAAGCCCTTAACCGCATAATCACATTATAATCATCAACCCGATAGTTAACTCGGCAATAAACATCATCAGGAGAACGAGAATTTAAAACCATAATTAACCGTTGTTTTTCTGAATCATTGAGATGAGACTGAGAAATTAAACTCCGGGCAGACTTATAGGGAATTTTCTTAAATAGTTCATCTCGTTCTGTTCCTTCAATATAACGGTTATGAAAATAACGATCAAAACGAACTAATAATAAATCATCGGGTTTATAGAAATCAAATCCCCAGGCTTGACTTCTTAAATCTTCTATCGTTTTAGGGGTTTTAGATTGGCAAATCT # Questionable array : NO Score: 3.06 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCCTTCCGAAGGGTTTAATTCGGATTAGTTGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.30,-5.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [58.3-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.37 Confidence: LOW] # Array family : NA //