Array 1 202057-198678 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAIMIW010000002.1 Klebsiella pneumoniae strain WHC160 Contig_2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 202056 29 100.0 30 ............................. CTCACGCTGATACCTCGGAAAAAGACGGGC 201997 29 96.6 32 .G........................... GCGGGCTGGGTTTTGTCGACTCTGCCGATCCG 201936 29 100.0 32 ............................. TAATATTGATAAATTCGATGAAGTAACCGGAA 201875 29 96.6 32 ............................A TCGAAGTACCAGCGCCGCACCGTGTTTTTTGC 201814 29 100.0 32 ............................. TACAGGACGACAGCATCCTGGAACATTTCGAC 201753 29 100.0 32 ............................. CTCTGCGTGTGCGCCTCCGCTACGAGGTGACG 201692 29 100.0 32 ............................. TGAATATTCATTTACTAAATTAGAGACAATTC 201631 29 100.0 32 ............................. CGGATTAAACGTAAGGCCGCGCGCTGGCGTAA 201570 29 100.0 32 ............................. GTGGTTTGTTACCGTGTTGTGTGGCAAAAAGC 201509 29 96.6 32 A............................ GAACGGAGGAATATAAGAACAAAAGCCCGCAG 201448 29 100.0 32 ............................. TAAACCGCTGGCGTGGTCAGTTGCGTGGCGGT 201387 29 100.0 32 ............................. GGCGCCGGCCTGATCACTATCGGGTAACGGTG 201326 29 100.0 32 ............................. GGCCTGAACCAGAGCATGATCTACACCTGGAA 201265 29 100.0 32 ............................. ATTGGGTAGAGCAGGCGAACGGATGTCTTTTT 201204 29 100.0 32 ............................. TTTTCACGGTCGAAGTTGTGCATGCTTTCTGC 201143 29 100.0 32 ............................. GACCTGTCATGACGGAAATAGCGGTTATAAAC 201082 29 100.0 32 ............................. TCGACGCCCCGGTGTGGGAAGACTTTGGCACC 201021 29 100.0 32 ............................. CAGCGCATACGGGTTAAACCGGATCACCTCTT 200960 29 100.0 32 ............................. ACATAGCGCCCGATACGCAGCGCCAGCGGGTA 200899 29 100.0 32 ............................. GATCGATCGTTATTGTTGAACCGCACTATGGT 200838 29 100.0 32 ............................. CCGAGGTTTTTCATACCTTCGGCAGTCGTAGA 200777 29 100.0 32 ............................. CGGAAATTTTGATTAGTTGAATCTGTGCCATT 200716 29 100.0 32 ............................. CCGACTTGGGACGAGGATCCGGCGGAATGTCG 200655 29 100.0 32 ............................. TAATGGCAAAACCATGACCTGATCCGGGCGTC 200594 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 200533 29 100.0 32 ............................. GTAACGCAGACGGCGAACGTCGGATCCATTGG 200472 29 100.0 32 ............................. GACCAGAAAGCCTGGGCATTGTTCCGCTCATT 200411 29 100.0 32 ............................. CCCCCGGCCGCGTGGCCGATTGCCATTACCGC 200350 29 100.0 32 ............................. TATACAGTATTATCATAGCGAATTCCCATCGG 200289 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 200228 29 100.0 32 ............................. GCACCAACGTTTACGGTGCGGTGGTGAAACAA 200167 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 200106 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 200045 29 100.0 32 ............................. TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 199984 29 96.6 32 ........T.................... ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 199923 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 199862 29 100.0 32 ............................. CTGCAGGTAAATGACTGGATGGGGGAAGAGGT 199801 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 199740 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 199679 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 199618 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 199557 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 199496 29 100.0 32 ............................. TCCCCTACCACCCACTGAGCAAACTGGTAGCA 199435 29 100.0 32 ............................. CAGATACCAACGGTTACTACGGCAATCAGCAC 199374 29 100.0 32 ............................. AAGGTTGACCTGTTGTCGGCAACCATCGAGCC 199313 29 96.6 32 .........A................... GAGGCGCGCGTTGTCGTCGGTGAGATGCGCGA 199252 29 96.6 32 .....A....................... GCCATTCGTGCTTCTTCGCTTTGCTGCATCCA 199191 29 100.0 32 ............................. GAATATAAAACCAGATTCCATATAGCCCTGTG 199130 29 100.0 32 ............................. CCGGTTACGGGGATGACTGCAATTCGCTCCTG 199069 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 199008 29 100.0 32 ............................. GCGGCGTCAGGTGTGTGGCAGAAAATTATTGC 198947 29 100.0 32 ............................. TCGTCTGAGTTCCGGCTTACGCCGTGCCGACA 198886 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 198825 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 198764 29 96.6 29 ............T................ GGGTTCACTTGGGTGAAACTGAACTAACT 198706 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 56 29 99.1 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : AGGTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTA # Right flank : GTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGATTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATTC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [10-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //