Array 1 20679-19369 **** Predicted by CRISPRDetect 2.4 *** >NZ_RXLG01000241.1 Escherichia coli strain 1CT 22A contig_220_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 20678 29 100.0 32 ............................. GTGACCATAAGGGCATTTCATACTGCCTTGCT 20617 29 100.0 32 ............................. GTGAACGTGACAACGCCCGCGACAGAAACGTC 20556 29 100.0 32 ............................. GGAAGAAGCGGTAAAGCGGGTTCCAGTTCAGC 20495 29 100.0 32 ............................. AAATTAATTTCGAAACGGGCGTTGATGGTGAA 20434 29 100.0 32 ............................. GCTGGCGCACCTTACGCAAAAATAGACGTAAA 20373 29 100.0 32 ............................. CCAGGGAGCGAAGCTGTGGCCATGCTGAAAGG 20312 29 100.0 32 ............................. GGGTTCTATTTCCTCGGGATTTGCCGACACGC 20251 29 100.0 32 ............................. GTCAACGCTGGTCAGGCGTGGTACTTCCTCCG 20190 29 100.0 32 ............................. GCTGCCGCGCTTTCGGTGTGGGAGCAGTATGA 20129 29 100.0 32 ............................. AAACTCCGTGGTGTAGTGCGTTTGTTGGTGCG 20068 29 100.0 32 ............................. TTGGTATTAACGGGAATGTAGTCACTCCAGGA 20007 29 100.0 32 ............................. GCGATCGTATTTTCCGCTACGTCGCTCAAATG 19946 29 100.0 32 ............................. TCGTTGATGGTGTGATGAGTGTACAAAAAAAA 19885 29 100.0 32 ............................. ACGACTGAATCCGGCGAGGCTATCAACTGGCC 19824 29 100.0 32 ............................. CCGCACACGTCGAGCTGGTGGGGATTAATGCT 19763 29 100.0 32 ............................. CAGTAAACGTTCGCGCGTTCTCGCGCTCACGA 19702 29 96.6 32 ............................C TCTGTGTATTCGCTACCAGCCAGCACCGGTAC 19641 29 100.0 32 ............................. CAGGGTAACTGGCTGCTCCTCAACCATTCCGC 19580 29 96.6 32 ........C.................... GGGTTTTAGCGACCGGACCAGAGTACGCAACA 19519 29 96.6 32 ........C.................... TTGCGCCTTAAGTTCCTTAACTTCCTCTGTAT 19458 29 96.6 32 ........C.................... GGAGTGATGAATTGGAAGTAACGGATAACCGC 19397 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 22 29 99.4 32 GTGTTCCCTGCGCCAGCGGGGATAAACCG # Left flank : GTCCTTGCCGCCGGTGAAATTGAACCACCACAACCTGCGCCGGATATGTTACCACCAGCTATCCCGGAACCTGAATTGCTAGGTGATAGTGGTCACCGGGGGCGCAGCGGATGAGCATGGTCGTGGTTGTTACAGAAAATGTCCCTCCGCGCTTACGTGGACGGCTTGCAATCTGGCTCCTGGAAGTACGTGCCGGTGTTTATGTTGGTGATACATCAAAACGTATTCGGGAGATGATCTGGCAGCAAATCTCCCAACTGGCAGGTTGCGGAAATGTGGTCATGGCCTGGGCGACCAATACCGAGTCGGGTTTTGAATTTCAGACCTGGGGTGAAAACAGACGTATTCCGGTGGATTTGGATGGGTTACGGTTGGTTTCGTTTCTTCCTGTTGAGAATCAATAAGTTACCCGTTCTTTAAAAATAAGGAAAAGTTTGAATTTAGTTGGTAGATTGTTGTTGTGGAATAAAATTGTTTAAAAACAGATACGTATGCTTAGT # Right flank : GACGCACTGGATGCGATGATGGATATCACTTAGAGTTCCCCCCGCCCCTGCGGTAGAACTCCCAGCTCCCATTTTCAAACCCATCAAGACGCCTTCGCCAGCTCTTTCACCAGAGGTAGCATTATCCGCATAACGTCACGGCAGCGACGTTCTATTCTTCCAGGAAGTGCCTTATCAATATGTTGTTGATTATCCAGTCTTACGTCATGCCAGCTATTTCCCGCAGGGAATGCAGCTGTTTTTGCGCGTTGCTGATAACCATCCTTATTTCCAAGATTCCAGTTGGTCGCCTCCACCGAAAGTACCGCAATACCGGCTTTGTCGAAAACTTCGGCGTCATTACAACAGCCAGTACCCTTCGGATAATTTTTATTCAAACCCGGATTGGTCGTTGCGGCAATTCCATGACTACGCGCAATTGCCAGCGCCCTGTCGCGCGTTAATTTCCTTACTGCTTCAGGGGTTTTTACACCGCTGTTGAAATACAATTTATCGCCAAC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCTGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCTGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.80,-11.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [43.3-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //