Array 1 211455-213925 **** Predicted by CRISPRDetect 2.4 *** >NZ_NDFM01000003.1 Rothia sp. Olga NODE_3_length_360580_cov_48.5791, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================= ================== 211455 36 100.0 28 .................................... TGCGGGGGGGATTTATCTGCGATTTTAG 211519 36 100.0 28 .................................... CACTTCAATGTCATATCACCCCACCACC 211583 36 100.0 28 .................................... TTATGAAGGGGTATATGATTCGTGTGCG 211647 36 100.0 28 .................................... GTTTCCGCTCTGCATCATTTCTGATGCT 211711 36 100.0 28 .................................... CTACCAGGCTGAGAATGGGTATGTGTGG 211775 36 100.0 28 .................................... TTAGGGTCTGATGTCGCTGGCAAGAACA 211839 36 100.0 28 .................................... GGCCGCCGTTTCGCTTATCTAGAGTAAG 211903 36 100.0 28 .................................... CCGCGCCGGGTACACCGATACGGTCTAC 211967 36 100.0 28 .................................... ATGGTGAGCGCGCCCGGCGGGTTATCGC 212031 36 100.0 28 .................................... TATCAGTAAGACTATGGAACTACTGTTT 212095 36 100.0 28 .................................... TATCAGTAAGACTATGGAACTACTGTTT 212159 36 100.0 28 .................................... TATCAGTAAGACTATGGAACTACTGTTT 212223 36 100.0 28 .................................... TATCAGTAAGACTATGGAACTACTGTTT 212287 36 100.0 28 .................................... CTGCGGCGTTGTACCCTTCGTGGAGAGC 212351 36 100.0 28 .................................... ATATGAGGGGTGTATATGAGGGGCATAG 212415 36 100.0 29 .................................... GCACCCTTTGGAGGGGCGCGGGCAGGTTT 212480 36 100.0 28 .................................... CCTTGCGGTGTGGGACGAAGCTAACAAG 212544 36 100.0 28 .................................... TCGCCGCCTGTATAGCTAGGCTCCACTT 212608 36 100.0 28 .................................... TCGCACCGCCGCTGGTGTGGCCCCGATA 212672 36 100.0 28 .................................... TTCCCAGGTTTGCTTTAGCCATCCTGAG 212736 36 100.0 28 .................................... GCCAAGTCTGGCTACGCCGGGGCGCCCG 212800 36 100.0 28 .................................... CCACTGGGTGACTGTGTGTCACCCCTGT 212864 36 100.0 28 .................................... TTAGCTTCTGCCCTAGAATTTCGGGGAA 212928 36 100.0 28 .................................... GCTTCCGCGTGCACGATTTCATGGGCTA 212992 36 100.0 28 .................................... TAGGCGGGCAAGGTGAAGGCGCGGATAG 213056 36 100.0 28 .................................... TAGGCGGGCAAGGTGAAGGCGCGGATAG 213120 36 100.0 28 .................................... TAGGCGGGCAAGGTGAAGGCGCGGATAG 213184 36 100.0 28 .................................... GCATCCTGCGCACGGTCTCTGGCATGGG 213248 36 100.0 28 .................................... GAAAGACTCGCTCGTGCTGGCCTGCAGA 213312 36 100.0 28 .................................... ACGCCTAGCGCCGGGGCTAAGCGTTCTA 213376 36 100.0 28 .................................... GGTTGTCACGGCCGCAGGTGCGTCGTGC 213440 36 100.0 28 .................................... TGAAGCTTTCGCTGGTTACGGTGGCTCA 213504 36 100.0 28 .................................... GACTACTAAGCTGAACGCGGCGTTTGTT 213568 36 100.0 28 .................................... GCACTAGGGGCTGGATGGTGATTTGTTC 213632 36 100.0 28 .................................... TTACCAAGGCCGTACAGACCGGAGATTT 213696 36 97.2 28 ..............T..................... AATCCACGCCGCAGATCAGCTCACTATT 213760 36 100.0 28 .................................... CATGATTCGGGTGTTTCGGTGTGTTGGA 213824 36 97.2 29 .......................A............ CCACATACGTGGGGATGAGTCAGGCTATT 213889 36 72.2 0 .....T..G...A.....G.G.....T.C.T...CT | T [213907] ========== ====== ====== ====== ==================================== ============================= ================== 39 36 99.1 28 TAAGTCTATCAAGGCTACAGAATGAAGGTTCCCAAC # Left flank : TTATTGGTCATGTTTGATCTGCCGGTAAAAACTAAGGGACAGAGAAAATTAGCGAATGGTTACAGGCATTCACTCTTGGATATGGGGTTTGACCGTCTTCAGCTGAGCGTGTATTGCAAGTACTATATGAACGGTAACTCTGCTGGCAAGGATTTGTCTCAGCTGCAGTTTCAAGTTCCGCCAGGTGGGGCGGTACGGATTATGAAGGCTACCGATTCGCAGTGGGCAGCAACTATTAGATATTTAGGTCCTACTCAAGAGACCCCGGAAGAGCCTCCGGGGGCTGTAGATTTCTTTTAGCTCTACAAATAATAGAAATGTGGGGTGTGGGTAACATCATGTTGCCCACACCCCACATTTATGAATTTGCGGGTGGTATATCGAGCCAGTTTTTCTCACATAGGGCCAATAACAGCCTCTTTTGTTGGGGATATGGCCAGATTTTCCTTCGAAAATCTGGCCATATATAGCCGCTGACTAGTAGTTATATGCAACGTAGT # Right flank : TATTGTTGGCTAGAGTGTGCAAAGTAGAGGGTTTGGGAAAGTATTCAATAAACACTGTCGGTAGAGTTTCGAAAGGTGTGTTAAATGCGAAACCCGAGCGCCACAACCGTCCGGATGGGTCTCGGATCCACTTCTAACAACTACTGTTGTTAGCATTACTAGCAGGATAGAGGGCCGCGGCCATAATATCAAAATCCTAGTTGAAGCCTGGGGAGTAGGAACAGAATATTACCCTGGAAATCATATAGATATAGGGGAGAAACTTATATCCTATATGCCTCGTCCATATCCACAACAAATGGAATCTGCACTGGGCGTGCAATAAAACTATTTTCTTTGTATTGATAGGGCATGTTTAACCGTCAGCTTCGCGTCTACTGTTTTTTCATGGGCTGCGGTGATAAAAGTAATTTTTTGTGTATTTTCGGTATTCGGTTTGTAAAACCCTGGGAGTTCGCTAAAAATTATGGGTAGAGCATTATTGAGGATGCTTTTGGATG # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TAAGTCTATCAAGGCTACAGAATGAAGGTTCCCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.20,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-13] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA //