Array 1 47718-49161 **** Predicted by CRISPRDetect 2.4 *** >NZ_MATO01000032.1 Caryophanon latum strain DSM 14151 DSM_14151_R1_001_contig_38, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ===================================== ================== 47718 33 100.0 35 ................................. GGAAGAATTAGAAGCCGTAGAGGAATCCGAAAACG 47786 33 100.0 32 ................................. GCTGCAGCATGTCCATCAACGGTGCTTATTTC 47851 33 100.0 33 ................................. GCCGTAGTGCTTTTGCGGTATGAAAGACCCCAA 47917 33 100.0 34 ................................. CAAAAATGCTTTTATCTTATTCGCGTTCAGTATC 47984 33 100.0 33 ................................. GATCCTATTGGTAATGATGTTTACGACGTGTGG 48050 33 100.0 34 ................................. CTCCAATGTGTTTAGTAATTGTTTTGCTTTTTCT 48117 33 100.0 34 ................................. AATCGACGAAAATGACGCAACACGTATGCAAGTT 48184 33 100.0 33 ................................. TTTAAGTACCGTGCTTCTCGCTCCTGCCACCGC 48250 33 100.0 34 ................................. TAAAAAGATGGTAGGCGCTTTTAATTCGTATCTG 48317 33 100.0 35 ................................. GTGAACGTCATCAAAAAAATGATGGGCGAATACGG 48385 33 100.0 36 ................................. ATTAGGAATTAAACGACCATTAATGTACGAGTTGGG 48454 33 100.0 34 ................................. ATTAGTAAGTATGAGGTGAAGTCTAGCCCGCAAA 48521 33 100.0 35 ................................. GTACAGCATTTACAGAAGCGGAACAACGTGTGAAA 48589 33 100.0 37 ................................. CTTGCTCACCTGAAAGAGATCTGGCGACGGAGTAATC 48659 33 100.0 36 ................................. AGCGTTGGAAAGCAGTGTGTATATCACACGCTGCAC 48728 33 100.0 33 ................................. AAGCGCTGGGCGTGTAAAGTGCGTTGCAAATGG 48794 33 100.0 34 ................................. GGTAACTGGCTTTTTTGTTTGTGCGAAAAGGAGA 48861 33 100.0 35 ................................. GCTCAGATTCAATTAAATCATTAAGTATGGCGCTC 48929 33 100.0 35 ................................. TTGCATTGGTCTGATGAAGGGAAACGAACGATTAT 48997 33 100.0 33 ................................. TCTCTACTGGTTATTACGCTTATACTTTTTTTA 49063 33 100.0 33 ................................. CAAGTGGGAGAAAGGTGATGCGACACCGTCATA 49129 33 100.0 0 ................................. | ========== ====== ====== ====== ================================= ===================================== ================== 22 33 100.0 34 GTCTCACCTAGCATTAGGTGAGTGGATTGAAAT # Left flank : ATTCGTCTATGTGCCGTTTAAAGACGCGCGCGAGCTATATTTAGAAATGGCGGACTTCACGAATCGCCAAGCGCACGATATTGAGCCGGTTTTATACGCCGCGTTGTGCAGCCCAAGCCCGATCGACAAGTTTGAGGAAAAAGTACATGAAATTGGGCTAGACGATTCATGGCAAGCGTGCAAGCGAGATTACGCAGCGAGGCATGTGAAAAATTGGCTTTCACAGTTTTAATATAAAAGGAAGCGGCTACTGAGGTAGTCGTTTTTTTGTTGCCATTAAATAGAAAATAGCATAAACTATTCATAAGTACGTTGCATGAAATCCAAACGATGAACGACGGTGCGAGCCGGAAGTGAACATGAAAACACCGCACTATCCGCACCGATAACGCGTGGTAAATGTGAGCATGTTTGAATGGATTGTAGGGCAAATAATGCAGTGTGCTTTAGAAAAAACATACTTATTTGCTGAAAATGGCATATTTTTTGCGTTTTTGGCA # Right flank : TTGACGCATCTTTGCGCATGGTTGCCCGTCTACGTCTCACCTAGCATAGGTGAATCAACAACTTAAACATTGATGAAAAGATTCTCTCTAAAGTTAATTACTCTAGATGGAGTCTTTTTTTATGGGTAAAAAAATAAAATGAGGTAAAAATATGAATTTATATGTGTTTTTAGTAGCTATTTTGAAAGGTTTTTTGATTTAATAAATGAGATAAGGTGATATTTGTCGCGTCATTATGTAGTAGAAGAATGTGCAAGGAAAGATGGTGATAACGAATGGAAAAGTTCAAGCGAGTGGAGTTTGAGGTGAGTGGCAAGCAGGCATTGTTTTCGACACCGAACTCATCAATGAATGGTTATAAAGTAAGTTATTTAGTCCCTACATACTCGGCGATTACAGGAATACTCGAAAATATTTACTGGAAGCCTACAATTAAATATGTCATCGAAGCAGTACGTGTAATGCATGAAATACGCACTGAAGAATATTCGGTGCTGCAT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCACCTAGCATTAGGTGAGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.58%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-4.10,-3.90] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [70.0-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.77,0 Confidence: HIGH] # Array family : NA // Array 2 55826-57604 **** Predicted by CRISPRDetect 2.4 *** >NZ_MATO01000032.1 Caryophanon latum strain DSM 14151 DSM_14151_R1_001_contig_38, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ===================================== ================== 55826 33 100.0 32 ................................. ACTGCAGTTAAGTATCTAGCTAACAAGATGCC 55891 33 100.0 35 ................................. ATGCCTTACTTTCAATGGGTTGTATACGAACTCGC 55959 33 100.0 33 ................................. ACTTTTACATAAAGGAAATAGCGCTGCTCAAGT 56025 33 100.0 33 ................................. CGGTCGGTTTACAACAACTTCTGCGTCTGTTAC 56091 33 100.0 37 ................................. CTCAGTGAAAAAGCGCCAGTATCGTCAACCATCGGTT 56161 33 100.0 35 ................................. GCTATAGCTTCGGTCTGTACGGTGGTACATTAACA 56229 33 100.0 36 ................................. TTTTTCACCAACATGCACCCCTTTTAGTGTCGTTGC 56298 33 100.0 33 ................................. TTGTAGCATATTCTCGATGCCGCTTCTGCGTTT 56364 33 100.0 34 ................................. TCGATTTTTAACATCAATAACGTTAGATATAACC 56431 33 100.0 34 ................................. GTAGAGTAGTCAAAGGAGAGATTATGAAATGGTT 56498 33 100.0 36 ................................. CATTTTGTTGTTAGTAGTGTTTAATGCTCCACCATA 56567 33 100.0 33 ................................. TTTGCGTACGCAAATGAATAACATCGTCGCAAG 56633 33 100.0 34 ................................. GACGGTGTGCGTGATATTACCATTTGATACAGAG 56700 33 100.0 34 ................................. GAACCAACGGAAGCTGGAGACATTATCTGCTTCG 56767 33 100.0 34 ................................. TAAGTAAGCATCTAGTATTCGAAACAACGTCAGG 56834 33 100.0 37 ................................. GTTCGACACTCACCACATCGTATGCATTCCCGTAGTC 56904 33 100.0 33 ................................. GCTTTCGCCATCACCGCAGGTGTCGCTTGCTGT 56970 33 100.0 35 ................................. GGATCGGTGCTAGTGGAACTTTTGCAGCTCTATCA 57038 33 100.0 32 ................................. AAGATTCTCAATCAGATATGTATTGGTAAATT 57103 33 100.0 36 ................................. ACGTTAAGGCAAACATCAGCGAAGCGATGGCGGAGT 57172 33 100.0 33 ................................. CTGGTCGTCGTCTACGTCAATCAGTAGCAAACT 57238 33 100.0 35 ................................. TGCAATACGTTCAGCTAGCGTTAATCGCTTCTCAC 57306 33 100.0 34 ................................. TGTAATGTCGCATCTTCAATCGTAGACAGCCATT 57373 33 100.0 34 ................................. ACGTCCGCGTGCGGGTAAACGTCATTTACGTTGT 57440 33 100.0 32 ................................. TGCTAAAAGTCGGACGTAATCCGCGCCATCGC 57505 33 100.0 34 ................................. TGATGTGGCACATATGATAACACCTAAACGAGTT 57572 33 100.0 0 ................................. | ========== ====== ====== ====== ================================= ===================================== ================== 27 33 100.0 35 GTCTCACCTAGCATTAGGTGAGTGGATTGAAAT # Left flank : GACGGCGCAATTGAGCTTCTTGAAATGCATAAAGAAAATCATTTTCAAAAGCCATTTGCGACATCAGGACGACAATTTAGCGTCATTGAAAAAGGCAACGGTCGCAACATTTTAGTGAATGAACAAGTTGTTGAAGAACTGCTGGCGTTACATCGTCCATTAACAAAAGGTGACTTGCGAACGTTAAATCGCTATTCAGTGTTTGTTTATCATAATCGTTATGAAGAAATGCTACAGCAAGGCATCATAAAGGAAGTTGAACGTGGCACAGAAACATATGCAGTGTTATCCGCACTAGACTATTATGATGAGGAATATGGCTTGATGTAAGTTACTTTTTTCGGTGCGGATGGGAAGTAAACATAAAATCCTTAGCGATTCGCACCAAAAAAAGAGCTGAAATTGAATATTTTTTGGTTTATAATGGAATTTATAACATCCTTTATTCTAATTAGTTGTATTTTTAGGAGGATAAAGACGTTTTTCTGCGACAAATCGCA # Right flank : TTTAGTTCGACGTTGCAACCGTCATATATGCTATAGTCTCACCTTGTATGTGGCAAATGAGTTGAAGCTCGTAGCTATATATGTCGCAAAATAGAATTAAATTGAATAGTAGTCAAAATGACACGAAAGATGTACAAAATTTGAATGTGATTTTGCACATCTTTTTCTTTTTATTGGAATTATTGTGAATGGCACACTTTTAAATCATGTGTTATAAGTAATGCAATGTAAAATAAAATGATAATATTTTAGTTCAAACTATATACTTCCACTTCTTTGTGCTTATAATTGAAGTATGAAGTAAAGGAGGCGTTTCAATGAATGCGCTGGAAGCAAAAGCGCTTGATACAACAGTTCAATTTTATGTGGAACAAGCAGCGACGATAAAGCAATTATTTAATGACGATGTGGAGATTGTCGTAACGGATCGAAGTAAGGTATTAGAACAAATACAATCTGATGAAATTCCAATTGAAAGCTCAAAAGGACGTACGTTGCAG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCACCTAGCATTAGGTGAGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.58%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-4.10,-3.90] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [68.3-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.77,0 Confidence: HIGH] # Array family : NA // Array 1 1499-145 **** Predicted by CRISPRDetect 2.4 *** >NZ_MATO01000036.1 Caryophanon latum strain DSM 14151 DSM_14151_R1_001_contig_41, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 1498 36 100.0 29 .................................... TAACATATAACACATGACGCAACCGCCAA 1433 36 100.0 30 .................................... TAAGTACGTGCCAGGCAATCGTACAATCGA 1367 36 100.0 30 .................................... CGGAAAAATGAGAAGCGGAGGGAATGAGCA 1301 36 100.0 29 .................................... GCTCTAAACTTCTCAGCTTCCGGCGCTCC 1236 36 100.0 30 .................................... ATGAAGATGCCGACGAGTGCTTGGACACAA 1170 36 100.0 27 .................................... GCAACAAGAGGCGAAGAGCGCGATTGA 1107 36 100.0 30 .................................... CTCGTCTGCCGTGCGCGCAAAGCCGAATGA 1041 36 100.0 29 .................................... GGATGGGCGGTATCGCAGAGAATCTGTAA 976 36 100.0 31 .................................... TTATCCGTGCAATCCAGATTGACGTTGCGCA 909 36 100.0 30 .................................... CCGTTGATGGACATGCTGCAGTGAAAATTG 843 36 100.0 31 .................................... TAATCGACGGCTATGACCGTTATCAACAAAC 776 36 100.0 30 .................................... GCGCAGAAGATTTTGCGCGGTACTTTGAAT 710 36 100.0 30 .................................... GGGGGAATACCCGGCTGAAGCATTAATCGG 644 36 100.0 30 .................................... CATCAACACAGAGGACTACTTAACGCTTGT 578 36 100.0 30 .................................... AAGTAAAACAGTAGCTAGTGCAACGAGTGA 512 36 100.0 30 .................................... CATCCGCGCCGTGCCGCTACACACATGGCT 446 36 100.0 30 .................................... AAGCACCAAAGAAGAAAACAACAGGCGGCA 380 36 100.0 30 .................................... CAATACATCAGCGCAGCAATGAAGCAAGCG 314 36 100.0 30 .................................... GCTGACGTCTTACGGGCAATCGGATGACGA 248 36 100.0 30 .................................... GCTCTTGGTTGTGCGCCGCGATTTCTTCTG 182 36 80.6 0 ..............C.......ACA.A..T..G... | T,C [148,154] ========== ====== ====== ====== ==================================== =============================== ================== 21 36 99.1 30 GTTTTAGACCAGTGTAATTTTAGAGAGTAGTAAAAC # Left flank : ACGAAGGCGACGTGCACCCAGAGACGAGCGTGCCGTTTGAACGTACCGAAATTCAATATGCGGGCGAAACGATTTCAGGTGTGTACCCTGTATTTGAAAGCGACTTTAGCGCACAGCTAGCACCGAGCGATTATGAGTTATCGGACAGTGCGCATGAAAAAATGGCGAACGCTCAGCTGTACGATGCGATTCAGCACGACGCAGCGCTCCAACTATCACTCGGCTTATCGGACGACGAAGTGAGCGCATTGCTTCATAACGAAACACCAGCAGGCTACACATGGCATCATCACGAGCAGCCAGGGCATTTACAGCTAGTTGATGCACAAACACATAACGACACAGCACATACAGGCGGACGCTTCATTTGGGGCGGCGGCAGTGAGGCGAGATAAAATACATTAAAAGAGCATGTGACAGAAGTGGACTTTCATGTATAATGAATGTACCAGTGAAAAGATATAAAAGTATTTTGTAATGAAGGCTCTCTAAAATTTGAG # Right flank : CTTTTATGTAACGTGCAGAGCTATCTCTGCGCGTTTTTTATTGTGCGCCCAGCATGCGCATAATCTTTAGGGTGTTAGTCCCGAGCCCCGAAGGCTGAAGTAGAGGTTAGCCAAGAGCAAGGGTGTCCGTGGTGACGCGGAATCT # Questionable array : NO Score: 3.20 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.00, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGACCAGTGTAATTTTAGAGAGTAGTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [9-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.68 Confidence: HIGH] # Array family : NA // Array 1 20952-22049 **** Predicted by CRISPRDetect 2.4 *** >NZ_MATO01000038.1 Caryophanon latum strain DSM 14151 DSM_14151_R1_001_contig_43, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= =================================== ================== 20952 33 100.0 35 ................................. TGCAATTCATTCAAGCTTATAACACTCGCACAGCC 21020 33 100.0 34 ................................. TAAAGCTTATGTATCGAACTTTGTAAGCAACAAG 21087 33 100.0 34 ................................. CAGACCAATGGCGCTGTACATCGGTAGACGCGAT 21154 33 100.0 32 ................................. ATTTGAAAACAATCGTCGCGTACAATGCGTGC 21219 33 100.0 33 ................................. GGATCTGCAAGATATGTTTGAATCGATTTTCGT 21285 33 100.0 33 ................................. CCGAAATTGCGTCGGCGTGCTGGGCCAAACCAT 21351 33 100.0 34 ................................. CGTTGTATTGGGGCTTGTTTGTACCGGAAGACGC 21418 33 100.0 32 ................................. GCACGATACCCAGCGTTTTGTGCGCTGTACGA 21483 33 100.0 32 ................................. GACGGTCGGCGCTTTTTTAAGCTTTGGATAGC 21548 33 100.0 34 ................................. GAGTGCGAGGTTTTGTTTATCCCCATCCAAAAAG 21615 33 100.0 35 ................................. GGCACAACCACTTTTGAGCGGCCTATCGTTTCTGA 21683 33 100.0 32 ................................. ATTGGTTACAGGTGAAGATGCTTATGGTAATA 21748 33 100.0 35 ................................. CGTCAACATATAACCCCTCATTTCTGCATAATAAA 21816 33 100.0 34 ................................. AAAAGAGCACTTATCAGCAGCAATGAAAAAAGCG 21883 33 100.0 35 ................................. TGTCTACTTAGAAGCAGTTAAAAAATATTGTGATG 21951 33 100.0 33 ................................. CGCATTAATCGTTTGTACATACATCACACCTCA 22017 33 100.0 0 ................................. | ========== ====== ====== ====== ================================= =================================== ================== 17 33 100.0 34 GTCTCTCTCTGTATAGGGAGAGTGGATTGAAAT # Left flank : ATTCGTCAAGATGTGGAGCAATACCCACCATTTATTTGGAAGTGATGCTATGTTAATTTTAGTAACGTATGATGTCGCTGTAAGCAAGCCGCTTGGTCAGAAACGTTTGCGCCGTGTTGCGAAAGTATGTGAGGCATATGGTATACGTGTACAAAATTCAGTATTTGAATGTAAAGTCGATGCAACACAATATAAACAATTACAGCTTGCTTTGCTCGATATTATTAAGGAATCCGAAGATAGTTTACGTTTTTATGAACTTGGAAATAATTATAAAAACAAAGTTGTGCATTTCGGTGTGAAGGAAGCATTAAATGTCGAAGAGCCACTGATTTTGTGATAGTGCGAATGTGAAGTGAACATAAAATCTAACATCATCCGCACTTGAAAACTAGTGAGATGTGAGAGTGGAACGACATAGGTTAATTCTATATATATATCGTTGGTGATAGAAATGTTGTTTTTATATTATTTATTATTTATTTTTGCTAGATTTGGCA # Right flank : TTACTTCGCGCGGTGGTTCGACAGGTGGTACATTTTCGGTGGATTGAAATATGAACATGCAGATCGTTTAGAAGAAATAACAGTCTCTCTGGGGAAAAGCTCGTGACTCAAGACCCCGTAAGCCGCGACGGAGGAGCGGTGCGAAGGCTTGAGGAAGGCGGTGAACGCTACGTCCATGTAGCACCGCCTTCATGACCAACATCGTGTTCGCCTCCGAGCCCCAGGAAAGCGAGCCGCAATACGCGAAATGCCAGTTGAATGGCTAATCAACACGCTTGATATTTGAAAAAACATTTTCGCTACGATAAACTATGCGTAAACACGTATATATGTCAGTATGTCTTTCTCGATTAGTGGGAGAGTGGATTGAGTGAGAAATGAGGGATTTAGCGTGGACGACGTAGGGAAAATGTATACGATTGGTGAAATCGCAAAGCTTACGAATTTGTCGATTCAGACGCTACGTTATTATGACAAAATTGAGTTGTTAAAGCCTGCAT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCTCTCTGTATAGGGAGAGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.58%AT] # Reference repeat match prediction: F [matched GTCACTCTCTGTATAGGGAGTGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-5.00,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [76.7-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.64,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 91-646 **** Predicted by CRISPRDetect 2.4 *** >NZ_MATO01000031.1 Caryophanon latum strain DSM 14151 DSM_14151_R1_001_contig_37, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================= ================== 91 36 100.0 36 .................................... GAATAAGATTGTAGTAGTCTACCTAGTTTTGCATTT 163 36 100.0 41 .................................... TTCGTGATTTAACTTCACGTGCAGCGCGTTGAATTGAGTTC 240 36 100.0 36 .................................... TAGCAACCACTTAAAACTGTCACGGTAAATAACGAT 312 36 91.7 36 ............G.......T.T............. ATTTTGTGACAAAGCCTTCTCGACAATCGTAATTAA 384 36 91.7 41 ............G.......T.T............. AATAAGTTAAGCGTCGCGTCTTCATGTGTGCCATCAATGCG 461 36 91.7 38 ............G.......T.T............. CCTTCTGTACGAAGTTGCTCTTTCAGGTAACAATGTTC 535 36 94.4 40 ..........AT........................ AATTGCGCCGCTAGCTCACAAAGTACTTTGTCTACGATAA 611 36 77.8 0 ..........AT........T.........C.CTTT | ========== ====== ====== ====== ==================================== ========================================= ================== 8 36 93.4 38 GTGTAAATGGGAAACCTTGAGTAAGAGGATTAACAC # Left flank : AATGCCTGAAAATCCTAAATGAAAATGCACCAGCCACCATGTAAAACGGCTCGTGAAACCGTTGGGAGAGTAAGGGCGAAAAACGGTACTG # Right flank : TATTCTTTCCACTGAACTAGTATGCAAAAAAACAGCAGCTTATCATCTAAATACCATTAGTTCGTAATGCTTACTTATCGTGAGTTTCGCGAATGAATTTTAACCGACTTATATACATAAGTCGGTCTTTTTTATATTTTTTTATGAATTTATTGGTAGAAATGTTATGAAAAATAATTTCTTTATGTTACCATTAACTTGTATTTTTAAGAGATGTTGAGTTTAAAGGAGAAATAATGACAATGCAGCGACCTATACATAATGAAATACCGTTAAGCGAAATACCGTTAACATATATTCGCCTGCATTTTTCGATTCGTGCAGTTGATAGCATGCAGCTAGGAAAATATCCAGCGATGACGATTCGCGGAGGGCTTGGCTATGCGATGCAACAGCTGGCGTGCGAATGTCGCAGCAAGCAGCACGATGCGGATTGTTTATATGCGAAAATGTATGAGGAGAAGCAAGGTGAAACAGTGGAAGATACGTACATTCCATAT # Questionable array : NO Score: 2.62 # Score Detail : 1:0, 2:0, 3:0, 4:0.67, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTAAATGGGAAACCTTGAGTAAGAGGATTAACAC # Alternate repeat : GTGTAAATGGGAGACCTTGATTTAGAGGATTAACAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.30,-0.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [48.3-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.27 Confidence: MEDIUM] # Array family : NA // Array 2 11365-11617 **** Predicted by CRISPRDetect 2.4 *** >NZ_MATO01000031.1 Caryophanon latum strain DSM 14151 DSM_14151_R1_001_contig_37, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ===================================== ================== 11365 36 100.0 36 .................................... AAAGGGAATAGTTTTTTTGAAAACTCATTCCCAGTG 11437 36 100.0 37 .................................... GCTTCCTCGAAAGCCCCTCCGTGTTTCTTTCGATCTA 11510 36 100.0 36 .................................... CGACATTTCCAGCGCATGTGTCGACAACGTGATAGG 11582 36 94.4 0 ..............................C..A.. | ========== ====== ====== ====== ==================================== ===================================== ================== 4 36 98.6 37 GTGTAAATGGCTAACCTTGAGTAAGAGGATTAACAC # Left flank : GACGAAACAGGTGGATAAAGACGAAAGTAAAAACCTATTTGTTGAAGTGAAGGAAAGTGGCATTAAAGCCGCAGCCGAAGCGTTAAAGGCGTATTGGGAGCAGACAGGCGAGTGGAGAGTACCGAGAGCGAAGAGAAAGCAATTCGAGCGTGTTGAAGCATTAAAGCAATTGTTAACGTAATGACTGGAGGTGTGGCGAATGTGCCGCATCTCTTTTTTGTGAAATTTTTTACATATAAACAAGTATTTGTGCTAAAATAATCAGTAGCAAGTGGTGCATTTTGTACCGCAAAACATGGTGCACTTTTTCGCTAAAAACGACGGTCACCATACATATGTCAATATAATAACATTTACACGAAAAACGCTTTGGACTACGTGTTACATGCTCATTTCACTATATCGATATAATCCCTGAAAATCCCAATAAGAAAAGCAACACGTGTCATGTAAATCGGCGTGTGAAACCGTTGGGGCAGTAAGGGGGAAAAACGGTACTG # Right flank : CACATTCATTCGATTTTGGTCGTAGAAAGATAAGTTTTGTGCAAAGCTCAACCTCGACTTAGAGGATCAGCATCGCTACGGTTTCTTTTATTTAGATATGCGGTGATGTCATAGTATGGATTGCGAACAGGGAGTGAAGTGTATGTATATAGCGGTTACGGAGCAAGGGGCGTATTTGAAAAAAGAAGGGGAGCGCATCGTCGTCGAGAAGGCGGGGGAGCGTTTGCGCGTCATTCACTTGCAGGACGTGGCGGGCATTCAGCTGTTTGGCAACATTCAACTCTCGACACCGCTGTTACAGCTTTGCATGCAGCGAGGAATTGCGGTGCATTACTTGAGCAAAAATGGTTTCTTTTACGGAGCATGTATTGGGCAACAGGCGTTCAATTATGAGGTGAAAATGGCGCAGCTGCACGCGATGCAGGATGCGCCTTTTTTGCTGAACATGGCAAAATATACGGTGATGTATAAGGTGAAAGCACAGCAGCTTGCTCTTCAAA # Questionable array : NO Score: 2.79 # Score Detail : 1:0, 2:0, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTAAATGGCTAACCTTGAGTAAGAGGATTAACAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.30,-0.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [48.3-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.27 Confidence: MEDIUM] # Array family : NA // Array 3 13264-14257 **** Predicted by CRISPRDetect 2.4 *** >NZ_MATO01000031.1 Caryophanon latum strain DSM 14151 DSM_14151_R1_001_contig_37, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================== ================== 13264 36 100.0 36 .................................... CACAACTCGCCCCAATTAGCAGGGAATAATACGTTA 13336 36 100.0 39 .................................... TTCTGGTTCATTCAGTTTTACGTACAGACAAAGCTGATT 13411 36 100.0 41 .................................... GAGCGTATTTCGCAAGCAGCTGCATCACTGCCTCTAACTTC 13488 36 100.0 36 .................................... AATCTTTCCCCGTTGCAGCGTGGTGTTGTACAACTT 13560 36 100.0 40 .................................... ATATCGTTACGCGCATTGATTTCTGCCATCGCATCTTTAT 13636 36 100.0 42 .................................... CTTCCAGTTACTTCTGATACTGTTGAAATAAAACAACCCCAT 13714 36 97.2 34 ...............C.................... ATTCAGACACGATTGTGTCTATTTCATTCTTAGA 13784 36 97.2 39 ...............C.................... TGATGAAATTTCTTTTTCCTGACGACCTTTATTTCGCCC 13859 36 94.4 36 .........A.....C.................... ATCTAACTTCACTAATTCACGACCAGATTTCTTATC 13931 36 94.4 38 .........A.....C.................... CGTTAACTGAAACCACATGCCCTTTATCGTTTCGAACA 14005 36 94.4 35 .........A.....C.................... TCCCTCCAGCATATCTAACGGCTTTTCTAGCACCG 14076 36 94.4 37 .........A.....C.................... ATGTTAGTTTCGATACCGCCCGTGTGCTTACTACCGA 14149 36 94.4 37 .........A.....C.................... AAAATCTCAACGTCTAGGATTCGAAAGCGGTATTTCA 14222 36 80.6 0 .........A.C...C...........A..A..A.A | ========== ====== ====== ====== ==================================== ========================================== ================== 14 36 96.2 38 GTGTAAATGGCTAACTTTGAGTAAGAGGATTAACAC # Left flank : GCGTGTGTCGAAGCTGTTGTTAAACTACGGAACGCGCGTGCAAAAAAGCGTGTTCGAACTGTATGTGACGGATGCGCGGCTTACGCAATGTGTCGGCGAGCTGCGCACACACATTACTGACGTCGATTCAGTGCGTATTTACAATTTAGGTGTAGCAGGCGCCGAGCAAACGTTACTGCTTGGCAATGCAAAGGCGATTCCAACACCGACGACGCATCTCATTATTTAGCTGTACAAGGAAGGTAGTATTTGGTAACATAAAGGAAGAATCAGTGGTGCATTTTGTGCCGCAAAACATGGTGCACTTTTCCGCTAAAAACAGCGGTCACCATACATATATCACTATAATAACATTTACACGAAAAAGGCTTTGGACTATGTGTTACATGCTCATTTCACTATATCGAAATAATCCCTGAAAATCCCAAACGAAAATGCACCAGTCACCATGTAAAACGGCTGTTGAAACCGTTGGGGCAGTAGGGGTGAAAAACGGTACT # Right flank : AGACGACTGCTTCGTATTGCCCCGAAGTTGTCGTCTTTTTTGCGTATATCCTATAATGTGGCGACTGCGATGTGCACAAAAAAGCCGCCTCGAATCGTTTCAGGCGGCTACAAAATTTACATATGTCGTTTTAATTTTTCGAGCTCGTCGATAGACAGACCCGTTGCTTGTTGAATTGTTTCAAAATCGACGTGTAATGCAAGGAAGTTTTTCGCTAGCTGTAGTCGTTCCTCATGGCGACCTGCTGCTTTTCCTTTTTCAATCCCAATTTCAATCCCTTTCTCTACGCCACGTATTTCACCTAACTCGATGCCTTCCTCAATTCCTTTATCTTTTGCATCACTCAATCTCGCCTCATCGTCAATGATCGCCTTCAGTCGCATCTCATACGCAAACCGTGTCTCCGGCGTCTGACTAAGCTCTTCCCATGTCCCAAACGCATCAATTAAGTTTTCGTCCTTCATCGCGAGTTCCTCCAATTCCTCATAAATTTCGGTATA # Questionable array : NO Score: 2.76 # Score Detail : 1:0, 2:0, 3:0, 4:0.81, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTAAATGGCTAACTTTGAGTAAGAGGATTAACAC # Alternate repeat : GTGTAAATGACTAACCTTGAGTAAGAGGATTAACAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.40,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [50.0-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 4 15738-16880 **** Predicted by CRISPRDetect 2.4 *** >NZ_MATO01000031.1 Caryophanon latum strain DSM 14151 DSM_14151_R1_001_contig_37, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================= ================== 15738 36 100.0 37 .................................... CTCTTGATTAAGAAGCTTAATAGCTTTTCATCTGGTT 15811 36 100.0 36 .................................... TCAAAGAAGTACTCCTCAGAGTGGTATGAGGACATC 15883 36 100.0 36 .................................... TACATTTTCATCGCGGAATACGGCAAAAACGCTTAT 15955 36 100.0 36 .................................... TTCTTACACTATGGTTGTAAAATGACAACTCTTCAT 16027 36 100.0 37 .................................... GAATGTTCTTACGCATGCGATTAACAGAATTCCTTCA 16100 36 100.0 41 .................................... GTTTCGAGCATTGCTAATTTCCTCTGTGTAATGCTCTTGGC 16177 36 100.0 39 .................................... CATCATGGGACGGTATCGCAACTAAAAACGGCTTTGTAC 16252 36 100.0 41 .................................... TGCACTAAGCCGTTGCGATTGTATGCGTACACAGCACCTTT 16329 36 100.0 34 .................................... ACTGCAGCATCGATATCGTAGTCATTTCCTGAGT 16399 36 100.0 38 .................................... GAAAATTTTTCGCTGACGTTTGACCAAATCGCTGTCGC 16473 36 100.0 38 .................................... TAACGCTTTGCGATTTGCTGATCCGTATACGCACGACG 16547 36 100.0 35 .................................... TGTTAGCATTTGCAATTCGCGTTCTACAAGCGCCA 16618 36 100.0 41 .................................... CTACACTGAATATGACAAAACATAACGATGCAGTAAAAGCA 16695 36 100.0 37 .................................... TCTTGCTGTTGATTTTGCGGACAGCCCCATCATAACC 16768 36 100.0 40 .................................... GAGAGTTAATTCGATTTTTTACGATGTTTACATTCTTTTC 16844 35 97.2 0 .................................-.. | CC [16875] ========== ====== ====== ====== ==================================== ========================================= ================== 16 36 99.8 38 GTGTAAATGACTAACCTTGATTAAGAGGATTAACAC # Left flank : CCTGTTCGTGCTAAAATCGCGTTCAAAAAGACAATCGTAATATGCTTATTGCGCTCGCTGCCGAACAGTTGCTTAAAGGCAAAGTCCACTTTCAAATCAATGAGCTTGTGCAGCGGAATGCGTCGCAATGCTTGTTGATTCATCGAAAATCACCTCTGTCATTAGTTTTAATTATAGCATATGAGCAGGTCGAACCATCGTCGAGCAAACGTCGCAAAATGAAAATTTGCTGTACAAAAAAGGTGGGAATTGGTAAGCTAAAGAAAGAGAAAGTGGTGCATTTCGCATCGCAAAACATGGTGCGTTTTGTCGCTAAAAACGGCGGTCACCATACCTATGTCACTATAATAACATTTACACGAAAAAGGCTTCGGACTATGTGTTACATGCTCATTTCACTATATCGAAATAATCCCTGAAAATCCCAAATGAAAATGCACCAGTCACCATGTAAAACGGCTGTTGAAACCGTTGGGGCAGTAAGGGCGAAAAACGGTACT # Right flank : CCACACAAACGAAAAAAGCGACTGCACCATTATTCCGGTGCGGTCGCTTTTTTTCGTTATTTTGTGAAAAAGTCGTCGAGCTGTTGGACGTTGCGCATGATGCGGTCGTTTCGTACACCGACTGCTTCAGCTAATGTGATCGAAGCGGCGGCGCGTGTTGTCGTGTCGCTTTGCTCGTCAAACGCAGCGGCAATTAAGCTGTCGTAGCTATTGAACGTTTCGGTAATGCGCTTGATAATGTCGGCGTATGCGGAATCGACGCGCGTTTGAAGCTCGTCCATATAAGCGAGACGGGCATGTTCGAAGCGTTCGTCTTCGATGTGGAGCTGTTCTTTTGCAAATGTACATACCATCATCGCACTCGTGCTGCCAATAATGGCACCGAGTATCGGAATCGGAATGAGCGCTTGCCCAATCGTTGCGCCCGTTGCAGTCATCGCCGCTTCAAAGCAAATCGCTTGTCCTTCGAGCAGCACGTCGTCGAATGTCGTTTCGCCTTT # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTAAATGACTAACCTTGATTAAGAGGATTAACAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.30,-0.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [50.0-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 5 21522-22294 **** Predicted by CRISPRDetect 2.4 *** >NZ_MATO01000031.1 Caryophanon latum strain DSM 14151 DSM_14151_R1_001_contig_37, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 21522 37 100.0 35 ..................................... CATTTACCTTACTCAAAGTATTATCCGTAGTTAAG 21594 37 100.0 35 ..................................... AACGTCATCATTAAGCTCCAAGAAGAACTATAATT 21666 37 100.0 37 ..................................... GTTCGTATGCGGCTGCGGTGGCAAGTTTTGTTGGTGA 21740 37 100.0 38 ..................................... CATGCCTATATTTCAATTGCAAACATTTTTTAAGTTTA 21815 37 100.0 39 ..................................... GATTGCAAATACCGTTATTATATCGTGTATCAACGTAAG 21891 37 100.0 35 ..................................... CTCCTTAAATATCAAATTTTGCTTTAATTAATGTT 21963 37 97.3 37 A.................................... CTAAGAAAGTCGAAACAAAGCTTTCTTTATGGGAAGC 22037 37 100.0 37 ..................................... AAGGTGAAGCTGTTGGTTACATTAAAGATGATGCTGT 22111 37 97.3 34 A.................................... GTAAGCCCTAATTTTCTTGTTACCATTGCACTTT 22182 37 94.6 38 ...........T.........A............... ATATCCGATTTGTAGTTGTCTTCCACATAGTTTTCAAT 22257 37 70.3 0 C..A.....C.AA.C...C.CC.T.......C..... | C [22290] ========== ====== ====== ====== ===================================== ======================================= ================== 11 37 96.3 37 TGTGTAAATGGCTAACCTTGATTAAGAGGATTAACAC # Left flank : TCCAGTGCGTGCCAAAATCGCGTTCAAAAAGACAATCGTAATATGTTTGTTGCGCTCGCTGCCGAACAGTTGCTTAAAGGCAAAATCTACTTTCAAATCAATGAGCTTGTGCAGCGGAATGCGTCGCAATGCTTGTTGATTCATCGGAAATCACCTCTATCGTTAGTTTTGATTATAGCATACGAACAGATCGAACCAACGTCGAGCAACTGGCGCAAAATGAAAATTTGCTGTACAAAAAAGGTGGAAATTGGTAAGCTAAAGAAAGAGAAAGTGGTGCATTTCACACCGCAAAACATGGTGCGTTTTTTCGCCAAAAACGGCGTTCACCATACCTATGTCAATATAATAACATTTACACGAAAAAGGCTTTGGACTACGTGTTACATGCTCATTTCACTATATCGATATAATCCCTGAAAATTCCAAATGAAAATGCACCAGTCACCATGTAAAATGGCTCGTGAAACGCTTGGGAGAGTAAGGACGAAAAACGGTAC # Right flank : CCTTCTCCACCCGACACTTGCCTTGTGCAGGTGTCTTTTTGTATGCACATATCCCGCAGCACTTTATAATAAGAGAGAATAATAAAAAGGGGGCGTGTGGATGTTACAGTTAATCGAGCCGTTCGTTGGCAAGGTGGCGCGGCAGGAGTTTCACGAGGAGGACGAGCTGACGTATTGCTACAATGCAGCGGGTGAACATATTGCTGATGTGTATGAAGTGAATGGGAATGTTGAAATGATTTCGTATTATGGTGAGAAGGAAGGGGCGCGTATTACACCGCAGCAGCTTCAGCAAATTACATATGATGTGCAGTACGTGTTTCGTATGCTGCATTTGTTTGTGACGGAAGTGAGAGATGATGGCGAATCGTTCGTCGTCGAGCTAAGTATGCGCGAGCCGAAATACCGCGTGTACGTGCCAAACAGTGGCATGCGCATTACGATTAGTTATACTGGCTTTGTTGAGCATGTCGTATTACTTGAAAATGATGTGGAGTTCG # Questionable array : NO Score: 3.07 # Score Detail : 1:0, 2:0, 3:0, 4:0.81, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TGTGTAAATGGCTAACCTTGATTAAGAGGATTAACAC # Alternate repeat : AGTGTAAATGGCTAACCTTGATTAAGAGGATTAACAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.30,-0.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-16] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [51.7-46.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 1 76598-74561 **** Predicted by CRISPRDetect 2.4 *** >NZ_MATO01000044.1 Caryophanon latum strain DSM 14151 DSM_14151_R1_001_contig_49, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 76597 29 100.0 36 ............................. ATTAAAGAGATTTTGATATGTTTGGGTGTCATATTT 76532 29 100.0 37 ............................. TCCTCTTCCGTTACGACCACGCCGCCGTTGTTGTCTT 76466 29 100.0 36 ............................. GTTTGTCTACTATAAACTTTAAATTTATTGTATTTT 76401 29 100.0 34 ............................. GCATGACGCTTTCGATTTGCTCCGAGCTGCTTGC 76338 29 100.0 35 ............................. TGTTTAATGTTTATATGAACCGTATGACTAAAAGC 76274 29 100.0 38 ............................. TTGCTTTAATGCGCTCCCGTAATTCCGAAAAGTTATCT 76207 29 100.0 35 ............................. TGCGCTGAAATATTCGATGGTGTATTTTCCACGTC 76143 29 100.0 36 ............................. TTTGGTCAACTAGCACCTTGTGTAAACCAAGTGGAA 76078 29 100.0 34 ............................. TTGGATAGCGTCATGCCCACCGTTGCCCAAACGG 76015 29 100.0 37 ............................. AATGAAGTTGATAGTCATTTGAGTGTACCCGCCACGC 75949 29 100.0 36 ............................. TGAGGAAACATATACGTGTTGTTGTCAATACGTAAA 75884 29 100.0 37 ............................. GGATGAATGCTGCGGTATAGTCATTTATCACGGGTAG 75818 29 100.0 35 ............................. TGTTCGTAAAATATAAATTCGTTTTCGCCTGGCAC 75754 29 100.0 35 ............................. TTTGCACTTAAAAGAAATACCTTACCGCCGAAACC 75690 29 100.0 36 ............................. CCAATAAGTGAACAAGGTTTCACTTTTCGCTATTTT 75625 29 96.6 34 .....................G....... GTAATTCCCCCGTTTGTAAAGTTAGCTCGCATCC 75562 29 100.0 36 ............................. CCCTTCAAAGTGAATACTTTCATACCCTTCACTGCG 75497 29 100.0 36 ............................. TTAGCATTTCATCGACATTAATGTGATACTGATTAA 75432 29 100.0 37 ............................. CCGTTTAAGTGAATGCTAACCCGAGTACAAAAATACC 75366 29 100.0 34 ............................. TTGATTTGCGCTTCACTCCAAATTTTCTTGATGC 75303 29 100.0 36 ............................. TCCGAGGGAACATTCAAGCTTATTTTTTTTACAAAT 75238 29 100.0 35 ............................. AAGCTTGGCGGCGTGCGCCTGCGCGACTTTACATT 75174 29 100.0 36 ............................. TCCGTTTGGTTCGCAACTAAAAACGCCGCGTCGCCC 75109 29 96.6 37 .............T............... AAAAAGATGTCTACTACCATGTTATTGTCCTCCTATG 75043 29 100.0 34 ............................. ATAGTCGGTAGTATTTGCGTTTTGCTTTAAACAC 74980 29 100.0 35 ............................. CTTACTCGGTAGCTGCTACATGTATAGTGTAAAAC 74916 29 100.0 36 ............................. TTGTAACAATCCATTTCCCACGTGCTACACGTTTGC 74851 29 100.0 37 ............................. ATCAAATATAAAGCTGATTTCAAGATTATACATAATG 74785 29 100.0 36 ............................. GTTTGTGCTGCTAAGGTTTCTGAAAAGCGTAGATTA 74720 29 96.6 37 .............T............... CCATCGCTGCTATCCAGTCACACTCGACTAGATCCGC 74654 29 100.0 36 ............................. TCTGAATAAATATATTGATGCCCTTGTGCTAATGTA 74589 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ====================================== ================== 32 29 99.7 36 ATTTTATCTGAACGAAGAGGGATTTAAAG # Left flank : TTTATTCGCTTAGAATGTTATAAGCTCATTAAACATGTAATCGGTGATGTACCGTATAAACCATTACAAGCTTGGTGGTGATTGGAATGTTCGTCATTATTACGTACGACGTTAACGTCAAACGTGTAAATAAAGTGTGCAAAAAGCTGAAGGAATATTTAACGTGGACTCAAAATTCAGTGTTTGAAGGCGAAATAACGAAAACGCAATTTATGAAATGTAAAAGTGAAGTAGAAAGCATTATTGATCAAGAAGTAGATAGTTTATATTACTATGTAGTGGAAAATCCAAAGCATTTGAAAAAAACATTTGTAGGCGCGGAAAAAGGCGATATGGATATCTTTTTTTAAAATGCATTTTGGCGAATTAACGTATTGATCGAGAAAACGCAGTGATATCAACGGATTCAGGGACTTTAATAGAAATGCTAAATTACATGATTAGACGTCTACTGCAAAATCGGTTGAAGAAACGTTGTAAATAAAGGTTTTTCTGCCGCT # Right flank : TTTACTTTGATGCCAAGTACATCGAGCATCCTTTTCATTTTATCTGTCCAACTTAGTGTAGCCTATCCAATTTATACAAAATGAAAGGGATGCCCAAACGTCGATTTTGACTTTTGGGACAGCCCTTTTTGAAAACCGGTTTGTCATTTTCGTTATTCGTCCGCTTCCGAGCTAGACGTATCTTTCGTATGATCTTTGTTGCGCTCGTCTTTTACTTTGTCGTTTAACTCCTCGTTCGGAATATGATCGACTGTTTGGATATCGGTGCGTTCTGCTTCATGCGTATTGTTATTTAACTCTTCACGGTCGACGAATTGGCGGTCGTTTTCGTGCTGTTCAAATTGCTGATCGTTCGCTGAATCGATTTCATTTTCAGAAGACGTCAAATTATTTTCCTTTTGCTCATGTTCGTTTAAATGGTGGTGGTGGTTTTGCTCGATTTCTTTTTTGCGTTGTTCATCGTTGTATGGCATGTCATCACTCCTTTGTGTATATTATTC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTTATCTGAACGAAGAGGGATTTAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.97%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.90] Score: 0/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA // Array 1 6606-7036 **** Predicted by CRISPRDetect 2.4 *** >NZ_MATO01000048.1 Caryophanon latum strain DSM 14151 DSM_14151_R1_001_contig_52, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 6606 36 100.0 30 .................................... AAACATATGCAAATGCAAATGTATGCGGCT 6672 36 100.0 30 .................................... TGTGGACGTTTTGTGCCTCGCGTTAAGTCT 6738 36 100.0 30 .................................... GTTTTCATTTGTGCTAATAAGTTGTTCACA 6804 36 100.0 30 .................................... TAGCTCCTCGTTGTTTGGTAAGCCCCACAC 6870 36 100.0 30 .................................... TTGTGGTTTGTTGCTGACACCAATGTACCA 6936 36 100.0 29 .................................... GCAATCGCGAAGGAAGCAGCAGCACAACA 7001 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 7 36 100.0 30 GTTTTAGACCAGTGTAATTTTAGAGAGTAGTAAAAC # Left flank : CAAATTATGAGACTAGCAACAGTTCATGTAAGCTATGAAAATGAAGAGAAGTTAAAAGTTGTTGATTATAGGAAATTTTTGTTACAAATATCGAAGCGTTTGAATTATAATAAAAGAACCAGTATATGTTTTTATCACTTTCCAGAAAATGAATTAACTCGAAATGAATTTTTTGAGCTATTGCAACAAGTTGACGGTGAAGATTGTACCATCATTTGCATTACGTCAAATGTTTCTTTTTTAGAAGCGGTGCCGTTGCGAAATATTCACCTGATTAAGTCAACAGGCGCACGTTATGACATCGAAGTATTACATGATCAAATTCAATTATTTGCAGATGAATTACGTGTTACTCAAATGTCGATATCGCCTGAGCAACTAGCAAAAAAGCTTGCGATTCATGATTTCTTTGGCGATTTCACGCTGTTAGATGAGCGATTTAGAGAGTTTTTAGAAAGTGAAAAGTATTAAATGAAGTGTATGGCTCTCTAAAATTTGAG # Right flank : CAAAAAATGGCGAACGCACAGCTTTACGACGCGATTCAGCACGACACAGCGCATACAGGTGGACGCTTCATTTGGGGCGGTGGCAGTGAGGCGAGATAAATAGAATGGAGCATAATGAAATGTATAAACAATTAAAAGAAGAATTAGCTCGACGTGAAGAAAAACAAGAAAATGTACAAAAGTTAATGCCATTAGTCCGTTATATGGAAAATCCAGTGCGCATCGAGGAATTTCCACACGTGAAAAGCATCGAGTATGCACACGACTTTGGGGAAACACCGATGCGTATGACGTTGTACATAGACGACATGTTCACAGTGGAGCAATACGAAAGCTTATGAGCTAGTGTACGTGAGAATGCGTTACTCAAGCCGTTATCATTGGAGTTGCATATTGTACACGAAGACGACAACGGTAATCGTTATAACACGAGCAATTTCACGAAGCAGCATACAGAAAAGTTAGTGGCGAATCACGCTCATATTGCGGACGTTACGTTT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGACCAGTGTAATTTTAGAGAGTAGTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [71.7-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.27,0 Confidence: MEDIUM] # Array family : NA // Array 1 4382-5071 **** Predicted by CRISPRDetect 2.4 *** >NZ_MATO01000057.1 Caryophanon latum strain DSM 14151 DSM_14151_R1_001_contig_60, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================= ================== 4382 36 100.0 39 .................................... ACAACTTCAGCTACTTCTTTAGCACCGAAATGAGCCACT 4457 36 100.0 35 .................................... TAAGACTGTTGGATGTAATGACACAGACTGCCCAT 4528 36 100.0 34 .................................... GAAGAATGGTCAATCACAGGAACTGCTTTGTTGT 4598 36 100.0 38 .................................... TCTGGAATGAGAAGCCGCCCACGTAACCACACTTAATG 4672 36 100.0 37 .................................... AGTAAGCCTGCCGCTACAGGAAGGTCTTCGCAGTCTT 4745 36 100.0 35 .................................... TCAAAATAGCCACTTCATATAAGCCTCCTTCTTCC 4816 36 94.4 37 ..........G...........C............. ATTTTGTCCGCCGATTCTTCGAGCGCGTGATTTAACC 4889 36 97.2 39 ......................C............. TGCGCCACAAATTCTTTTACAGCTTCTAATGCTTGATCG 4964 36 100.0 36 .................................... GGTAAATTTCACAATCACTTAATGTAACAATGTAGC 5036 36 86.1 0 ....................TT........C.C..G | ========== ====== ====== ====== ==================================== ======================================= ================== 10 36 97.8 37 GTGTAAATGGATAACCTTGAGATAGAGGATTAACAC # Left flank : TCCGAAAGCAAGCTCGATTAAATATGTGCGCAGTAAAAGCTTTATGAACGATCAATTCGATGACGGTTCACGCATATTTGACCTATGGCTTAGCATGCCGAACTACGTTGTGAAATAATGACGAACGCTCACGGTGAGGAATCATTGTGGGTGTTTTTTTGAGTTTCTTCTATATAAATAGTACTGACACCGAGCAAGTATCGTATCACCGAACTGGTCAAAACTTTTGCTGTACAAAAAAGGTGGAAATTGGTAAGCTAAAGAAAGAAAAAGTGGTGCATTTCGCATCGCAAAGCATGGTGCGTTTTTTGCCTAAAAACGGCGTTCACCATACCTATGTCAATATACTAACATTTACACGAAAAAGGCTTTAGGCTAAGTGTTGCACGTTCATTTCGCTATATCGATATAATCCCTGAAAATTCCAAACGAAAATGCACCAGTCACCATGTAAAACGGCTCGTGAAACGCTTGGGACAGTAAGGGCGAAAAACGGTACT # Right flank : GTTTTATACGCACTTCACCAACCGACACGATTACGCAATCATTTACGACCGCTTCCTATGCTGAAGTGGTCTTTTTTGTGCGGCAATTACGTTTGCTACACTTGTTCTAGCATTCATAAAACGCTAAATATTTACAATATATAACGATAACTGTATGATGGAAAAAAGCGCTTCTATATGGCGTACTAATGAAAATCATTTCGAAAAGGGGGATGTTATGTTCAAAAAAGTAGTAGCGAGTGTTGCAGCAGTGGCATTAACGTTATCGCTTGCATTACCAGCAGGGGCGACGAAGTTTAAAGATGTGCCGTCTACACATTCATTAGCGACGGAAATTAGTTATTTATCAAACGCAGGGGTTATTAACGGTTATGCGGACGGTACATTTAAGCCGAATGCATTGCTTGCGAAAAAGCACATTGCGGCGATGCTTGTGAAGGCGCTGAATTTACCGACGACGAATTTGCGTGATCCAGGCTATCGAGATGTGCCAAAAACGC # Questionable array : NO Score: 3.15 # Score Detail : 1:0, 2:0, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTAAATGGATAACCTTGAGATAGAGGATTAACAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.30,-0.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [50.0-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 1 2902-2563 **** Predicted by CRISPRDetect 2.4 *** >NZ_MATO01000093.1 Caryophanon latum strain DSM 14151 DSM_14151_R1_001_contig_93, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ====================================== ======================================== ================== 2901 38 100.0 37 ...................................... ATTAAGGAAACGAAATGAATACTTGATCCCCACATAA 2826 38 100.0 40 ...................................... GGAATGGCTTGTTTCACTAACGCATCCATTTCCTCCTCAG 2748 38 100.0 36 ...................................... TAATCAAATAGCTCTCCTTGAACTTTTTCAGTGATC 2674 38 94.7 36 .....................G...............T CGTCGAAAATGCCGGCGAAGCTCTTAATCGAGTTGC 2600 38 94.7 0 ..................................T..T | ========== ====== ====== ====== ====================================== ======================================== ================== 5 38 97.9 38 TGTGTAAATGGATAACCTTGATTAAGAGGATTAACACA # Left flank : AGGCTTCAGGCTAAGTGTTGTACGTTCATTTCGCTATATCGATATAATCCCTAAAAATTCCAAACCAAAATGCACCAGTCACCATGTAAAACGGCTTGTGAAACACTTGGGAGAGTAAGGACGAAAAACGGTA # Right flank : TTACAGCTTCTAAACATATTTCTTCAGTTTGACTTTTCGGTGAATCGTTTACCTCGCTTTAGAGGATCAAAAAAGACGACCACTTCGTAGCAATACGAAGCAGTCGTCTTTTTTTCGTTTATGTAGCGGGTACGAGGAGGCGGGCGCGTGCAGCCATTGCCTCCTTTAGCAATGTGTAAAAGCAATGTGGAGGGAGGAGGTCGTAGCGTGCGAGCAGCTCGTCCATTTTGTCGAGTGGATCACCGCCGCAAATTTCTTCAATGCGCTCCTTCGTATAGGGCTCGAAGCCGTGTCCGCTAATGCCGTTATGACGTAGATGAATGATGTCGAGTAGCCACGTTGCAGAAAAGTCGCGCACAATTTGCTCAGCGAACGGGCTAGATTGTTGCTCGGCGTGGCGCAAATATCGGAAAAAGTGGCGCGTGACGTTTTGCTTTGGCGTTGGGAGGACGACGTATTGTGTAGCTCCGATTCGTTTGATGTAAGCGCGAGTGCCTTGT # Questionable array : NO Score: 2.96 # Score Detail : 1:0, 2:0, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TGTGTAAATGGATAACCTTGATTAAGAGGATTAACACA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.42%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.80,-3.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.78 Confidence: MEDIUM] # Array family : NA //