Array 1 322940-320594 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP006932.1 Candidatus Hepatoplasma crinochetorum Av chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 322939 36 100.0 30 .................................... AAAAAAAATATTTGATTCTGTTAAAAGAAG 322873 36 100.0 30 .................................... ATATACCAATCAATCTAATTGAGGCGGTAT 322807 36 100.0 30 .................................... ATTGTCTTCTCAGTTAAACATAAACTCTAT 322741 36 100.0 31 .................................... AATTAGTATAATCATCAGTTAGTGTAAATGT 322674 36 100.0 30 .................................... ATTAACATTTGAGTAAAATCCTCTAACGTT 322608 36 100.0 30 .................................... GTAAGGAACGTATAAATATAATATTTCTGT 322542 36 100.0 30 .................................... TCGTTATAAGCGAAAGTAGATGGTCTAAGG 322476 36 100.0 30 .................................... TAGTGGTATGAATGCATTAACCATTAAAGT 322410 36 100.0 30 .................................... TTATTTAAAAATTAAGTTGCGAAGTAATTA 322344 36 100.0 30 .................................... TATTTTAATTAAGTCATTATATGCAAAAGT 322278 36 100.0 30 .................................... AGATTAAAATGTTAATTGAATATTTATGGG 322212 36 100.0 30 .................................... TTTAATGGTATTCGGGTCCATCTGTGCGAT 322146 36 100.0 30 .................................... TTTAATGGTATTCGGGTCCATCTGTGCGAT 322080 36 100.0 30 .................................... TTATTTTTTTGTTGTTTTTAACAACATTTA 322014 36 100.0 30 .................................... ATAATATAACTATATAAGAAAAAACTAATT 321948 36 100.0 30 .................................... AAATCAACTGCAATTCTCATATTCTACGTT 321882 36 100.0 30 .................................... TAAAAATATTAGTGGATTTACATTGCTATA 321816 36 100.0 30 .................................... AGCAGACACCATTATGATTACTTCAGTTTT 321750 36 100.0 30 .................................... ATTAAAAATAAGAGGAATTTATTCCAATGT 321684 36 100.0 30 .................................... GTTTTAATATAAGGTTCAAAAGCAAAATTA 321618 36 100.0 30 .................................... TTAAAAATGACCGTTTAATATTAAGGGACA 321552 36 100.0 29 .................................... TTTTTTTTTCCTTTTTCTTTACCCACCTA 321487 36 100.0 30 .................................... TTTAAGATTATGACCAATGAAATTATACGG 321421 36 100.0 30 .................................... TATATCTGATGTAATCAAATGTATATGAAA 321355 36 100.0 30 .................................... ATTTACATTGGTATAAATGCCTCTTACTTT 321289 36 100.0 30 .................................... CACCAGACGAATATTTAGCAAATTTTAATA 321223 36 100.0 30 .................................... AAGGTAGTGAGGAACTAAAAAAACCACATA 321157 36 100.0 30 .................................... ATTTTTTGATAGTTTTTTATACCATATTAT 321091 36 100.0 30 .................................... TTTGCAGTAGTTGTTTTTCCTAAACCTGCT 321025 36 100.0 30 .................................... TAATAGTTCAATTAAGCTTAAATTTACGTT 320959 36 100.0 30 .................................... ATATTAACATTTGCGATGGACCTTTTCAAT 320893 36 100.0 30 .................................... TAATAGTTCAATTAAGCTTAAATTTACGTT 320827 36 100.0 30 .................................... GAAATAATATTTAATATTGCATTAAGATTA 320761 36 100.0 30 .................................... CAATAATAACTACATATAATTGATCAGATG 320695 36 100.0 30 .................................... TTTCCTTACAAAGATAATGATAATGAAGTT 320629 36 94.4 0 .................................T.A | ========== ====== ====== ====== ==================================== =============================== ================== 36 36 99.8 30 GTTTTGGTTAGTTGGTATTCATGAGTTGTTTAACCC # Left flank : ATCTCCTCACATATAGATAGTATCTGCTAATCCATCCAAATCTTGATCAATTAAAGCTCCAGAAGTTGCTGGATAAATTTGATCAGATTCTTCCGAATAAACTTGTTGCCCATTTACTTGTTCAATAATATTTCCAATTTGATTACTATTTATTTGTTCTTTTTTAAAATTCTTATCATAGTTATTTAAATTAAAATAACCAATATTTAAAAAAACTAAAAAAACAGAAATAAAAGTAAATATTTTAAAATTGAAAAATTTATTTTTTTTCATTATTTTAAGAATATTAATTCCTTTTATTTATTAATTTTTATTAAAACCCTCTACGCTCAAAAATATAAAATATTTTTAATAAAAAAATTATAACAAGGAAAAATAAAAATATTGAAAAAATATTATTTATTAATATAAATAAAAAGCAAAATATAAATATTTTAAGTTTTAAAATATTTAAAATAACGTCTATTTTACTTGCTTTTTTTTATTATAATTAATTTAAT # Right flank : ATAATTTTTATATAATAGATTTAAATAGAAATTTAAATATATAAAAGGATAATAATGCAATTAGAAAATAAGAAATATTTAGCATTAGATATTGGAGTTACATCATTAGGATGGGCTATCTCAGAATATAATAATCAAAAAAACAATTGAAATATATTAGATTTTGGTGTTAGATTATGAGATGCACCCGAAGATAGTAAATCTTTAGATACAAAAACTTCCGAAAGAAGACAATTTAGATCTGGAAGAAGATTAAATTCTCGTAAAAAAATAAGAATAAATGATCTTAAAAAAACTTTTTATAATCATAAATTATTAAAAAAAGAAGATTACCAAAATCACATTTTAAAAATTAATAAAGAAGGAAAAAAATATTTTAAAGATGATAAATTTAATTCAATTATTTTAAGAAAAAAAGGATTAGAAGAAAAATTAACAAATTTAGAATTATTAATTGCTTTAATTAATATTGCAAAAAGAAGAGGATATAGTAATCGTTT # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTGGTTAGTTGGTATTCATGAGTTGTTTAACCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [90.0-90.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //