Array 1 39488-38258 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAERKW010000014.1 Acetobacter persici strain Dm-46 scaffold14_size91131, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 39487 32 100.0 34 ................................ AAGAATAACGAACTCCGCATGATGTTCCTTGCGT 39421 32 100.0 34 ................................ AGACAGTCCGTCATCACCGCTTGTCTGGGCGGCT 39355 32 100.0 34 ................................ TTACAAGTCGGCGTCATTTGCTGTCCGTGACGAC 39289 32 100.0 33 ................................ GTCTTTTTCGGACCAGCCGAAGCAATCTTTGAG 39224 32 100.0 35 ................................ AGCGAATGAAGCCATTATGCGTTACTCCGGTAGAA 39157 32 100.0 34 ................................ CGATGCTCATATGCTGCCCCTTTGTCCACACACC 39091 32 100.0 37 ................................ CTTCTGCGAACCGGCATCAGCACACAGAAAACCTTTG 39022 32 100.0 34 ................................ TCAGTGAGTGCTGTCATAGTAGCAAACCCATCAG 38956 32 100.0 34 ................................ ATCTTCCGTCACTACGCCGCGAGCCAGAGCAGAC 38890 32 100.0 35 ................................ CTACGCCGCAACCGGGAGCGCCGCAGCCGCAGGGA 38823 32 100.0 34 ................................ TATCAAGAGCGAAATTGCTCACAGCCAAAAAAAG 38757 32 100.0 34 ................................ ACGGTATTGGACCATCATGCCGTGGAGCAATACT 38691 32 100.0 35 ................................ AACATTGGGGTCAATGGCCTTTGCCCCGTCCACCC 38624 32 100.0 34 ................................ TCGGGTCGGGCCGTTTCTGCCTGGTCTGTTGGCG 38558 32 100.0 34 ................................ TCTATGATCTGCGGGGTATCCATGCGCCTGACAG 38492 32 100.0 34 ................................ CCTCTTTTGCGTCAATGCTATGAAGATGACCCAT 38426 32 100.0 37 ................................ GTGATTTGCTTGGGGTCTCCGCCCGGGGCGTGAATAG 38357 32 100.0 36 ................................ GCTGCTGATAATCAAGAGATTTATGATGTGCAGAGT 38289 32 93.8 0 ...................T.......A.... | ========== ====== ====== ====== ================================ ===================================== ================== 19 32 99.7 35 GTCGCTCCCCGTGCGGGAGCGTGGATAGAAAC # Left flank : CGGGTTGCGCGTGCGTGCCTTGATTATGGTCAGCGTGTTCAGCATTCTGTTTTTGAATGTGAGGTCGATCCGGCGCAATGGGCAGAATTACGTGCGCGCCTTCTTGATGAAGCAGATTCTGCAAAAGATAGCCTGCGCTTTTATCAACTTGGTGCTAAAGGGCGTCAACGTGTAGAGCATGTAGGGGCAAAACCAGTGCTGGACCTTGAGGGCCCGCTTGTTTTTTGACGCCTGAACATTTCTGCAAATAGCCAGTGGCAAGCGGTTTCTGAACGATATTTTCAGATAAATAACCGAGGTTATCTTGCCGATTCAAGCGTCTGCGCGAACCGTGATCGGTTGATAAAATCCGGGGAGGATCGCGCACTCCATAACATATTGAAAAACAAAAACAATCTTTCTCGCCTTTGACGTGCTAGTGTTGCGAGATGACTTCAGCCGACAGGGTTCGCGCAGAACACATGGTTTTTCCCGTCATAATCAGTTAACAAAACGGCAGC # Right flank : CCTTATGACATAATTACAAATGATGAGACTGGTGAACTCACTTCCCATGTGCAAGCACAGATAGAACTGTACCTCTGCTTGCGCGGTATACTGAAATAAGGGATTTTTAGATTTCTTTACTCACACCCTGCTTCAACACCCTAGCCGTCGTTTCCACCAAGGCACGGCCACTGGCTTCGTCACGGGCCGGAGCGGGGAAGCGGGGTGCGAGGCGGAACTGGTAGCGCATGGGGAGCGGCGGGCGGCGCAGGAAAGGCCATCCCTGAGAAAGATAAGGGGAACTTGTTTCAATCAGAATGGGCTGCACGGCAGAGCGGGTGCGTTGGGCAATGGCCGCAAAGCCCGGCTGGAGTGGTCCGGTATCTTCATCCGCTCTGGAGCGTGTTCCTTCGGGAAACAGAAGGACCTGACAACCTTCTTTTAATCTGTCTGTCGCAGGGCCAATCAGTTTGAGTAAGCTGTCATGCCGGATATAGCCTGCGGTGCGGAGCGTGGTGCCC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCCGTGCGGGAGCGTGGATAGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCTCCCCGTGCGGGAGCGTGGATAGAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.90,-6.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 23786-22627 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAERKW010000011.1 Acetobacter persici strain Dm-46 scaffold11_size133824, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 23785 32 100.0 33 ................................ TGCAAAAATCTGGGGTGGCTCCCACAGATATCG 23720 32 100.0 33 ................................ CGGGTATTGAAGGATATTACGCAGGATGATTAT 23655 32 100.0 37 ................................ CTCTTTGTTCAGGATCCAGCAGCGCACGCGCAGCGCC 23586 32 100.0 35 ................................ CACGCTATATGCGCCGCGTGCAAATGCCCGCTCTC 23519 32 100.0 36 ................................ CGTGGAGCCGGTCAGCACGCCGTCCAGATCAAAGCT 23451 32 100.0 33 ................................ CCTGCCCGCTCAGCCATCCGCACGATTTTCCGG 23386 32 100.0 35 ................................ GGCAATGAGAACGCCAAGGGCCGCGCGTAACTGGC 23319 32 100.0 34 ................................ GCCGCAGTATTGACCCGCACGGGCAGATGATCAT 23253 32 100.0 35 ................................ CACCACTGCGGTGGCGCCAGACGCAGCCCCGTCAC 23186 32 100.0 35 ................................ CATATCAGACCAGACACTCCCACGAGTAACAGCGC 23119 32 100.0 33 ................................ ATCGGCATGCCGACAAGCGCCGCCCGGATCCGG 23054 32 100.0 35 ................................ TTTGAACCGGCCATCATTGTCCAGATCAATCCCAT 22987 32 100.0 34 ................................ ACGGGCCGAGACGGTCGCATTGCTGGAAAACGCG 22921 32 100.0 34 ................................ TTTCCGCCCCGTGGACTAGCCCTGAAAATTTCGG 22855 32 100.0 34 ................................ TCCGCATAATCAGAAACAGCGGCCATGCCGCCAT 22789 31 96.9 34 ..............-................. CCGGACGTGATCGTCAGCACCCGGCTGACACCCA 22724 32 96.9 34 ..........G..................... CGGGACATGGAGGAGAACATTGCAAAGGATATCC 22658 32 81.2 0 ..........G...A.A..........A.G.T | ========== ====== ====== ====== ================================ ===================================== ================== 18 32 98.6 34 GTCGCCTCCCATGCGGGGGCGTGGATAGAAAC # Left flank : TATCACATGCGGCAAACTCTGGTGTTTCTGGACGCATTTGTGCTGAACAAGCCGGAGGTGATGATCGGGCAGGCCATGAGCAAGTTTGACGCAGAGAATTTGCGCCTGACAGACGAGCCAACCCGTGCCTACCTCACACGCCAGATTGCAGCCCTCGGCGCGCTGGCAAGGCAGGTCTCCCCGCATACGCCAGATGCGGGTTAAACTGGCCGCGTCAGGAGGGTTCAGGAAAGCTGGGAGATAAAGAGCTTTTCTATGACTGAGCGCCATCATCGTTCTGACGGATGATGGCGCAGAGGGAGTTCACCCCTAAAGAGGCGTCTGCGCGAACCTCTATCGGTTGTAAAAAACCGGGGAGGATCGCGGACGGCTTAAGTGGCTGTTTTGGAATGAAAAAATTTTCATACTCCGAGATCGGACAGCCAGAAAAACCGCCTGAGTATCAGGTTCGCGCAAAACCCCCGATTTTTCTTGTGCGCATCAGGTGATATGCTCGCGCC # Right flank : AAAAGAGAGCGCGCTTTTTTGCGTCCCTGCGACGTTCTCGGGGTGCAGCAGGCTAGGTGCAGGGTGGCATCCAGCCTGAGTGTTTTTAGGAAGTTAGTGAGACGCGGGCTGAGGCAGAAGTGTGCCGGTTTCGGGGTCAAGCAGAAGAGGGGGGAGGCGCGGGGGGCTGGTGAAGTCAAACAGGTCGGTCAGATCATGCGCGACAGCATCAAAGGAGCCGCCGCCAAGGCGCTGGCCGTTTAGCCAGTTATCTTCGATAAAGCGCGGGATCGAGCTTTGTGTGATCTGAACATGGCTCACAGCGTTGGTGCGCGCCCATGGGGAGATCAGAATAAACGGGATGCGGGTGCCCGGTCCGCAGCGCCCGTTGACAGGCTTGCCGCCAACCCCGGCAAAGGCCGTGCCCGTGCCACAACGCCCCGGAGCATTCAGCTGATCAACTTCCGGATCAAATGACCCATGCTGAGGCGGGATAAAAGCGTGGTCATACCAGCCGTCTG # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCTCCCATGCGGGGGCGTGGATAGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCCTCCCGCGCGGAGGCGTGGATAGAAAC with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-4.60,-9.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [19-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [40.0-46.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //