Array 1 250731-249381 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADIXI010000001.1 Enterobacter hormaechei strain EC3 contig00001, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 250730 28 100.0 32 ............................ TTGTAGCGGCAAACGTACCGCCAGAAGTGGCA 250670 28 100.0 32 ............................ TTGTCCAGCTCCGAGGCGTCGCCGTCCTCATA 250610 28 100.0 32 ............................ TTGTAAACGAACACCCACTTGTGGTGATTTCC 250550 28 100.0 32 ............................ TGATTCGACTTGCTCTGCTCCGGGTGAATCCA 250490 28 100.0 32 ............................ TGTTGGCATCGCGTTATCTACAATATTCGCTA 250430 28 100.0 32 ............................ TCCGATAGTTACTGTATATGCATACAGTATTA 250370 28 100.0 33 ............................ AACTCGTTTGGAGTGATGCCCGGGTCGTACGTT 250309 28 100.0 33 ............................ AGGTCATACACGTCAGCACACTGTTGCGAAAAC 250248 28 100.0 32 ............................ AATGAGCAACATCGACAAACGCGCATTACGAG 250188 28 100.0 32 ............................ AAGCATCCTTGCGATATCCTTTTGCTGAATTC 250128 28 100.0 32 ............................ CCATGCGCCACATCTTCTCGCCCGCTGTCATA 250068 28 100.0 32 ............................ CCAATGTCACTTTAACGCCCCTGGCGGGTATA 250008 28 100.0 32 ............................ AGATCGAGGAATGTCTCGTTTGCCGGTGCAAT 249948 28 100.0 32 ............................ AGTTTATCCCGACCGGACTCACTGACGAGGCG 249888 28 100.0 32 ............................ CTACCCAGAGTGCGACTATAAAAAACACTCTC 249828 28 100.0 32 ............................ GATTTATGCCCCGTCGATTTGCTCCCATGGCT 249768 28 100.0 32 ............................ TGACAGCCAGGCTTCGCGCAGCACATACACCA 249708 28 96.4 32 .....T...................... TACCGTGGCGGCCTCCTGCTGATCGAATCGAA 249648 28 96.4 32 ............G............... CCTCAGGTGTAAAACGAGACGCCCAGTCTCAG 249588 28 92.9 32 ..T.........G............... TTTGGACTGTAGATTGCCCAGGACCATCGTGT 249528 28 92.9 32 ..T.........G............... TACGCCATAGACGGTGCCAGGAATCCTCATCC 249468 28 92.9 32 ..T.........G............... AGCGGGGTAGTGGTAGCGCCCCGCCGCTTCGT 249408 28 96.4 0 ..T......................... | ========== ====== ====== ====== ============================ ================================= ================== 23 28 98.6 32 GTGCACTGCCGTACAGGCAGCTTAGAAA # Left flank : CGCGCCACACGTTCGCTCTCGTCGGGCGTCAGCGTCCGGCCCGTACTTTTGCGGCGGGCAACGTTACGCTCGTTGATTCCCGTAACGCGTAAAATCTCCGCTTTCGACATGTCCGTCCACTCGTGAATATTGTCGAGGACGCTGACGGGTAATCCTTGATTGAGATATTCAATCAGCCGCATGCCTCTGCTTGCGGGTAAACCGGCGTAGCGCCACAGCGTGTTATCAGCCGACCTTTGCGCAGGAACCCATGTTCTCATGATACCTCCTGAGTGATGTCATTTGTCATGAGTAAGTATAGCCATTTGTCAGGAGGTATGGAACGGGTGTTTTTTTGTTCAGGGTGGGGTAAAAGAAGGATGGGAGTTGACCCTAATTTTTGACCAAAATGTAATGCATTGATTTTTAGATTAAAAAATCCGGGGTATAAAAAAAGGGTTTGAGCAGTGTTTTTAGCTTTTTTTGTATGAAAATCATGGCGGTGGAGAGATATTATTTCA # Right flank : TCATCGAGTGTAAGGCTGTGTGATTTTATTGTGTGCACAACCGCACAACCAACACAAAACCCGAAACAAAACCCAACCAATCGTTCAAATAATCGACTGTACTAACAAAAAAATAAGGCCGGGAATATCCCGGCCTTATTTAATATTCATCTGCCATTACAGGCGAAAACAATTAGCGACTACGGAAGACAATGCGGCCTTTGCTCAGGTCGTACGGGGTCAGTTCAACAGTCACTTTGTCGCCCGTCAAAATGCGGATATAGTTTTTGCGCATTTTACCGGAGATGTGCGCAGTTACCACGTGACCGTTTTCCAGTTCTACGCGAAACATGGTATTAGGCAACGTATCAAGTACGGTACCCTGCATTTCAATATTGTCTTCTTTGGCCATCTAATCCTCTGGGGTATCACTACCAAGTTTTGAACCGGCAAGATAATGCCGAAATTCCTCAATTAAGTAAAGAATTGCGCGTTTAAAACGCAGCAAAACAGTCTCAGCG # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [56.7-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 260959-260210 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADIXI010000001.1 Enterobacter hormaechei strain EC3 contig00001, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 260958 28 100.0 32 ............................ ATAAGCGCCAGCATGAAAGAGCCAACCCACAT 260898 28 100.0 32 ............................ GGTGACGAACGCCACTAACGATATGCGCTCCT 260838 28 100.0 33 ............................ GATGTCTGATGCAACTGAAAACAGACAGCATAT 260777 28 100.0 32 ............................ TTGATAAAGACTAAGAACCTGTCTCTTTGCTG 260717 28 100.0 32 ............................ AGGGTCAATATGAGCGCGGCGAAGATATCAAT 260657 28 100.0 32 ............................ TCGATGATGAAACATACCAGGCGAAACTTATC 260597 28 100.0 32 ............................ TCGCGTATCGCGCGGGTGTACTTCCCCCTATT 260537 28 100.0 32 ............................ ATTGGTTAATCGGTGCTTTGGCCTCGCGTATC 260477 28 100.0 32 ............................ TGAAGGCGCTTGTAATCGCGCAGGCCCATTTT 260417 28 100.0 32 ............................ TACACCCAGCGGCGATTTCTGCATTCCTGTTA 260357 28 96.4 32 ..........T................. GCGACAGCAGGAAGATGGACAGCAAGAACAAA 260297 28 100.0 32 ............................ ACTTGTCTTGCTGGATGTTAGTTACTGAGCAC 260237 28 78.6 0 ............A........A..CTCC | ========== ====== ====== ====== ============================ ================================= ================== 13 28 98.1 32 GTTCACTGCCGTGCAGGCAGCTTAGAAA # Left flank : TCCCGCAAACGCAGCCCGTTTGCCGTTGCCTCGGTGCTTATCTGGAAGAAGTCAAAACCGAACTCGCAGAATCAATGAGCGATTTCCGTGTGGTTGAATTTGACGACGAGGCGGAACGGCCGAAGGAAAAAGAGTGGCTTCTGGAGGATACCGAAACCAAATGCGATTACTGCCGGGCATTAAACCACGTGCTGCTGGTGTCGCATTTTGACCGCGAGATGCTGCCCCATCTGACAGGATTGCTGCATGACATTACGCATTCGATGGCGGCAGATGTGGCTGCACCTGAATGTGGAAAGCCAGTAATTCATATCATTAATTAAGTTTAGTGTTGCGCGTCGGGGAAGGGATTCCGGCGCGGTATGGCGCAACCCTTTTTTCGAGTGGTTCTTTAAGTTATTGATTTTTATTGTGCGAGTAAAGTCCGCAGAAAAAAGGGTTTGAGGTAGATATGTTGATTATTTTCTTTTCGAACAATAAGATGGCGAAGATTTCTTCCA # Right flank : CCAAATATTCACCCCAACTATTTTAAAACCCACAATCATCACCACAATCCTCTTTGTATTTTAAATAAACTCAATACTCATTGACCCCATAACCATATTTCCTCATATATATTATTCACAAAAATAATACATTAAATATGTTAGAGATTTTTTATCTCGATATACCGATAATTATTATTCATTTGATACGCGTCACATTTGTCTTCATCTTATCTCCGCTAACATACCCCGCATTCAACATATTGAAGTAAAAAGCACTTGCTATGCCAGCGAACAGCATTACCCCATCCGACTTAAAAACCATTCTTCATTCAAAACGTGCCAATATCTATTACCTGGAAAAATGCCGTATTCAGGTAAATGGTGGACGCGTTGAATATGTTACTCAGGAAGGTAAAGAGTCATTTTACTGGAATATTCCCATCGCTAATACGACGGCAGTAATGTTGGGAATGGGAACATCCGTGACTCAAATGGCAATGCGGGAGTTCGCGCGAGCG # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTGCAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTGCAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 3 277383-276332 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADIXI010000001.1 Enterobacter hormaechei strain EC3 contig00001, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 277382 28 100.0 32 ............................ ATCGACCAGCCAAAGCAAAAGCAGTACTACAT 277322 28 100.0 32 ............................ ACCATTCAGCAGCAAGGCCAACAAGCTTACGA 277262 28 100.0 33 ............................ GCCCTGCGATCACGATCCTCATAGGATCATGAT 277201 28 100.0 32 ............................ AGACGGCAATCCCGGCCAGCCGCACGGTTGCC 277141 28 100.0 32 ............................ AGGAGCTGCTGACAGAGACGGCCCTGGCAGAT 277081 28 100.0 33 ............................ AGGCTGCATTGGAATATACAGTCCGCAGCAATC 277020 28 100.0 32 ............................ GTTAAGTTTTGAGTACACGCTCACTGTAAAAC 276960 28 100.0 32 ............................ AGGAAGAGTGGCTTCGTACGTTATTTTGTACT 276900 28 100.0 33 ............................ AACGTTCAATATCTTGATGCGCAAGGGCTTCGT 276839 28 100.0 32 ............................ AGTCTCTCACTGGAACGGGAATAACAGCTGGT 276779 28 100.0 32 ............................ GTAACCATCGCAATTCTTTAACCATTCTGGAA 276719 28 100.0 32 ............................ ATGAAAAAGCTGTTCTGCCTGTTGGTGGAGGG 276659 28 100.0 32 ............................ GGAACCGCAAACAGAGAAGCGCCACCGCCGAC 276599 28 100.0 32 ............................ TGCAACAGATTTTTGACGAAGGCGGCTGCTGC 276539 28 100.0 32 ............................ GTTAAGGTCGAAGGATTCACGCTCCTGCTGCT 276479 28 92.9 32 ..........AG................ ATCGCCGGTATCTGATGAAGACCTGCTTCACC 276419 28 96.4 32 ...........G................ CTGAGCTTTGAAGGCGAAGTGCGCAAGAAGGA 276359 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 18 28 99.4 32 GTTCACTGCCGTGCAGGCAGCTTAGAAA # Left flank : CAGGAACCCGCACAGACGGCGAGTTCACCCGTAAGCTGCGCTTCGGCACCGGCGGCAAAGGCGGCGACCTCTTCATGGCGGGTGGGCATCCACTCAATGGTCTTCATCTTGTTAAGGCTATCGCTGAGTCCGTTCAGAGAGTCGCCGGTAACGCCCCAGATACGCTTTACGCCAGCCTGCTCAAGGGTTTTCGCTATGTATGCAGCCACGGTTTGTTTCATGGTTGTCCGTCTCCTTTTTGTGATATCGCTTACAAGCTTAGAAGAAAGTCGCTGTATTGCCTGCTCAGTATTCTTTATGTACAGGTGGTTTTTCTGCGCGACGCGCCGCCAGCGGGCTGAGGTTGGGGCGGGCGGAAGCGGGTTTGCAGACCCTTTTTTCCTGATGGTGCATAAATTATTGATTTTTTTTATGGTTTGGAGAGAGGAATAAAAAAGGGTCTGGAGGGAGTTTTTGAGATATTGGTTTATCAGACAAAGGGATAGGTGTAGATTATTTCA # Right flank : TCTTGCCTGATTTGCTCATGCCTTTAGTCACGGTTCACTGCCGTACAGGCCGTAGGCACAATGTAGGCCGGGTAAACGTAGTGCCACCCGGCAAAAAGCCCGGTGGCGCTGACGCTTACCGGGCCTACAGGGGTTCCAAAGGCAAATGCGCTGGCCTGCACGGGCAAAAAGCCCGGTGGCGCTGACGCTTACCGGGCCTACAGGGTTCCAAAGGCAAATGCGCTGGCCTGCACGGGCAAAAAGCCCGGTGGCGCTGACGCTTGCCGGGCCTACAGGGTTCCAAAGGCAAATGCGCTGGCCTGCACGGGCAAAAAGCCCGGTGGCGCTGACGCTTACCGGGCCTACAGGAGTTCCAAAGGCAAATGCGCTGGCCTGCACAGACAAAAAAGCCCGGTGGCGTTGATGCTTACCGGGCCTACAGGTGAACCGCGAAAGATTATGCGAGCACAAGATCGCCTTGCGGATGGCACGAACATGCCAGCACATAGCCCTCTGCAATT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTGCAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTGCAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [46.7-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //