Array 1 2584549-2585370 **** Predicted by CRISPRDetect 2.4 *** >NZ_LR607362.1 Klebsiella variicola strain 4928STDY7387736 chromosome 1 Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 2584549 28 100.0 33 ............................ CACTACGACGTCGTCGAGTGCTTCACCTTCCAG 2584610 28 100.0 33 ............................ CCAGGCTGCCCGGCAAGGTATAAAGCCCGGTCA 2584671 28 100.0 33 ............................ CGTGCTGGAGCTGGTCGAAAAATCGTAGGTGGT 2584732 28 100.0 33 ............................ TGCAACTTACCAAAAAACAGGCGCTTGTAATGG 2584793 28 100.0 33 ............................ TTACTCCTGTGAATTGATCCAGTTAATTCGCAT 2584854 28 96.4 33 C........................... TGGTATTCCCAGAGCCATCGGTTATGAGGACAT 2584915 28 96.4 33 C........................... TCCGGCTAAAGCTAACACAGCGAAGCTTGGCGA 2584976 28 96.4 33 ..........T................. CGCTCGATGAGGTTAGTTGCCCATCGTACATTT 2585037 28 96.4 33 .C.......................... TCAAACGCCGCCAGTAAGGCGATCTCCATTTCT 2585098 28 96.4 34 ..............T............. TGAAGCGTAGAAAAGCAGGCAGCTTTTACCCTGG 2585160 28 96.4 33 ..............T............. CAGCGAATAGGCTGCAGCGGCAACGGAGATACC 2585221 28 100.0 33 ............................ CCTGCAGCTGGCCGTCGAGCTGACGGATGCCGG 2585282 28 96.4 33 ..............T............. TTCATCACGTGTGAGCGGATTTGGCTCTATCCT 2585343 28 92.9 0 ...................A.......T | ========== ====== ====== ====== ============================ ================================== ================== 14 28 97.7 33 GTCTTCCCCACATGCGTGGGGGTGTTTC # Left flank : TCAGCGTTGGCCAGCCGGCGACGGCGGTGATCCGCGTCGAGCGCCTGCGTCTCGACGGCGCAGCGCAGGATAATAGCCTCCAGCTCCCGCTGCTGACCAGCATGTACCTCGGCGACCGCTGGGAGTACCTGTTCCGTACCGAAGGCGACGACTTTCCGCTGCGCGCCTACGGAACGGCGCTGCGCGATGCCGAACACTGCCATCTGACGCTCCCGGCGGAGGATGTGTGGATTTTTCCGCAGAAGTAACTACGCGAAGCCACGGAAGGCAAGCATCAGTACGTCGCGCTACGTTCTGGGTACGACAAAAGCGTTTTGCGCCTGGCTGCGGGGCGGGCAGGCCAGTAGGGTATATCGGTCCTGGTCAGCAGCAAGTCGACGGTGGTGATATGGGGACATACTTTTTCGTTTGATAAATGTTGATGCTGATGCGGAAACCCTGCGGAGTGCAATTATCGTAAATCTGGTGTTTTAATACGCCGCTAAACACAATATGCTGGT # Right flank : TCGCCTTTCAAGTGACGACAAGTCACGTCTGTGCGCATTTCTCAGATGGAAGGGGATTCCTGACGTAAAGGCATCAATGCCGTGACATAGTTATCCTTAATGTAGATTAATGTCTTCGAAATTTCGTTTGGCCAGCACAGTCTCATATATTTTTTATATGATTTTACTTATAAATATTCGTGAACTATGTTTGTTCTATACTTTCTTTAGGGACATCTAAATCGTTCGAGTTTCTTACTCGTCTGGAGATATTGTTCTTCATATTAATTATTTATAACTTTTTATATTATTATTTTTGGCTTTTATCTTTAATTCAGTGTGTTGTGGATATTTTTGATTTTATAAAAAGTTATTTATAAATTTCCCGGTTTTTAGTATTAATAAAGGGCACATGTTTTTTAAGGAAAAATTCCATGAGGCGCTTGACCAGGGTTTCGCTACAAAATCAACATGCCATAGCGGCGATAAGTTTTGAGAACTGCCCAGCGAAAACCCGGATG # Questionable array : NO Score: 5.84 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCCCCACATGCGTGGGGGTGTTTC # Alternate repeat : GTCTTCCCCACATGTGTGGGGGTGTTTC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,9] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCTTCCCCACACCCGTGGGGGTGTTTC with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.50,-10.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [58.3-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 2594124-2595064 **** Predicted by CRISPRDetect 2.4 *** >NZ_LR607362.1 Klebsiella variicola strain 4928STDY7387736 chromosome 1 Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 2594124 28 100.0 33 ............................ CGGGGTGGCCTTTAACGAGGCTGTCGCAGCGCT 2594185 28 100.0 33 ............................ TATGACCCTGCCGCCTACGAGAAGCGTAAAGCA 2594246 28 100.0 33 ............................ TTACTACAAATCCGGCACGTTCCATCTGGAAGA 2594307 28 100.0 33 ............................ TCTCGACTTTCCCTTCCGCCGCGTTATGCAGCA 2594368 28 100.0 33 ............................ TTGATGAAGGGAAATCAGTCATAATCGGTAACG 2594429 28 100.0 33 ............................ TTTTAGCTATGCCTTTTACGGCTGTTCAAAATT 2594490 28 100.0 33 ............................ CGATCAGCGCGTCGCCAAATACCGCCGATACCC 2594551 28 96.4 33 ...........A................ TTGATCGAGCTGTTAACCGATATCCGCGAAAAC 2594612 28 100.0 33 ............................ CATCGAGGGCCGCGTCCTCGCCTGGCTCGCCGG 2594673 28 100.0 33 ............................ TAAATCAGCGCATCATAGCCGTTATCCTGGCAA 2594734 28 100.0 33 ............................ CATTTACGGCCAGTGCCGCGTCTTTCCTGACCT 2594795 28 100.0 33 ............................ CATCGATACGGTCGGCTATATCTCATCCACAGG 2594856 28 96.4 33 ..............T............. CGGGGCTCACCTGCGTAGTTGTTGGCCGTCAGC 2594917 27 89.3 33 .........G....T..-.......... CATGATTACCTCGTATTAGAGCGGCCGCTATCT 2594977 28 78.6 32 ..............T.......G.GGCT CTCTTGATACTGACTCGGTGCCCGAGCGAGAC 2595037 28 75.0 0 ..............T......T.TAGCA | ========== ====== ====== ====== ============================ ================================= ================== 16 28 96.0 33 GTCTTCCCCACGCACGTGGGGGTGTTTC # Left flank : TTTACAAAGAACGGCTCTGTATTGATTTGGCATTTTCACTCTCGAGGGAAATGGCGGGCCGCTACGATAAACACAAAGTCTCTGAGGCATTCAGAAAGCGAGTGATAGCCCTGGATTTGCTCAACCTGATTGCGGCCGATATTAATGAGCTGATGGGAGGAAAAGGTGCTCGTCGTACTGGCAAATGATCTGCCGCCAGCGGTCCGTGGACGAATGAAGCTGTGGTTTGTCGAACCCCGGCCAAATGTTTTCGTCTCAGGCGTCAAAGATTCGGTCGCGCAAACCGTTGTTGATTATTTGATTCAGTACACGCCTGTGGAATCAGGCCTGATGCTGTTTCGCAGTATTCCTCAACCGCCTGGCTATGAAATTCGCTACAAGGGTGAGGTCAGGAAGCCGATTATTGATATTAGTGGGTTACAGCTGATTATTGAAACCCTAAAACTGTCGTAATACGTGGATATAGTGGTTAAATTCTCGCTCTTTCACAATATGTTGGT # Right flank : ACTAAGCGGAATACTCGTATTAGAATAAATATTTTATAGCCAGCGAAACTAAAATAATTTTTAGCTAATGAAACTGTCGTTTGGGAGAGGTAGGAATATTTTATCGCGATAGAGAAGGGAACTGTTTAAAACAATAACGGCGAATGATTATTATAAAATGAAGGATAGGGAATTCATATGTTTCGACTTTACCAGCCACATGATTTAATACGCCAATTAAATCCTGAAGACTTTCAATATATTTTGACACCAGCAGGTTCGCTAAGAGAAGCGTGTATACATTACGACCTCTCCTGTGAGGCGAATGGTCACAGCCTCGCTTTTGGCCTACCGAAGGAAATATACAATTCATCTCCACATAAAAGGCCATATGAACGAAGGCAACATAGCTATGCAGATCCTATCTACGATGAGGTAGAGCACAGGCTACAAATTGGCTGGCTTGTTGGTGTGGATATCTCCAGGTGTTGGAGCAGTGACAGAAATCCATTTTACATCGA # Questionable array : NO Score: 6.06 # Score Detail : 1:0, 2:3, 3:0, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCCCCACGCACGTGGGGGTGTTTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCTTCCCCACGCACGTGGGGGTGTTTC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.50,-10.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-17] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //