Array 1 830834-831393 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP018100.1 Bacillus safensis strain BRM1 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 830834 32 100.0 35 ................................ ATCAATAGCTTTGCAGTATCAGTTTTTTGAATGTC 830901 32 100.0 33 ................................ TTCTGTCTCAGCTGTTTGTCCTGGCATAAAGAA 830966 32 96.9 34 ..................T............. AGGTTCAGGGATGGTCTGATCCGCCGTCTTAGCG 831032 32 96.9 33 ....................A........... CTGAAGATGACACCGGAAACTTTGGTGTAGCAT 831097 32 96.9 35 ...........C.................... TGTTTTAAATTTTCACCTCCGTTATGGAATCATCG 831164 32 90.6 33 ...........C..........AA........ TCCCATTTTTAATAAAGTGAACAACTTATTATA 831229 32 93.8 35 ...........C.......A............ TCAATGACTGAATAGATAATCGGGTTGTTTTCGTT 831296 32 100.0 34 ................................ TTGAAATCTAGAATGTATTTTTCCATGATCATTT 831362 32 84.4 0 ...........C.........C.AT..T.... | ========== ====== ====== ====== ================================ =================================== ================== 9 32 95.5 34 GTCGCACTCTATATGAGTGCGTGGATTGAAAT # Left flank : ATGAAGGAAATAGCCGATCAGTTAGGCGAAACAAGACAAAACATCTCAAACATTCACAAAAAAGCGCTCAACAAACTAAAAGAAGAAACAGGGGGAGATGTCCGTGCAAGAAGACAAAATGACCAATGGAGAAATGGAAGAACTCATTGAAACCTTCACACCCATGATCAAAAAGAAACTACAAAACACGGCATATCAAGAAAGAGAAGACCTCGAACAAGAACTCTATATCAAACTCATCGAAAAAATAGACCGGCTGATTTACCAAGAAGGACCTGGATTTTGGGAGTTTATTGTGGAATATATGACGAAGTTGTAAGAGAAGCTGATGGTGCGAATGTGAGGTGAACATAAAATTCCCGGTGCATTCGCACCTTTTTATTCGACAAAAATGAGAGAAAATGTATATTTTATGAAGGGGAAAACAAAATTCGATATTGAAATTTGTGGATTTTCACTATTATTTCCTCAAAAATGTTACAATTAGGGCGGAAATCGCA # Right flank : TGATTGTCTCTTAAACGGTTATGGCCACCTCAAATCCATCTTCTTACAACATCCTCTTTCAAATAGCCATCAAATATACTGTTCATTTGTATAGTGAAAACATGACTCATTGCAGTCATGTTTTTTTCTTCTTCTTTTTCCTAAATAAACCTTAAAAAATCTCAAAATAAGTCGAAATGAAAAGTAGTCATTTAGATTCAAATTTTATCCATTCGTAGTGAATGATGAAGGAGGAAATGGTTTGGGTGAGACGGAGCGAACCGGTAAAGTGGAGCAGCTGATCTTAGAGAATTATCAAAGATTAAACAGCATGATATCAGAAGAAGTGGACTTTGCTTCTAATCATGGCGGACTGACAGGAGATTCTAGAGAAGTGATGTGGCTGGAGTTTTTTCGGAAAATCATTCCTAAAAAATATTCATTAGCACAAGGTGTCATCATTATTGACTCAGAAGGAAATCATTCTAACGAAGTCGATATTGCCATATTTGATGAGCAGT # Questionable array : NO Score: 8.63 # Score Detail : 1:0, 2:3, 3:3, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.59, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTATATGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.25%AT] # Reference repeat match prediction: F [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.40,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 839026-839390 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP018100.1 Bacillus safensis strain BRM1 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 839026 32 100.0 36 ................................ CGAAACCATTTGTCTCTAAGTTTACAATGCCTGGCC 839094 32 100.0 34 ................................ ATGGTTGCGGTGCTTAAAAAAGTCCGTAAAACCC 839160 32 96.9 34 ...........T.................... TGCATTTGCGTCACTTGTAATGTGAGGAAAGCCA 839226 32 90.6 34 ...........T.......T..A......... AAGTCGTCAACTTTTACTTTTCCATCTGAAAACT 839292 32 93.8 34 ..............A...............T. TTCTCAAGATACTTCATGGCGTGGTGAATATTGC 839358 32 90.6 0 ......................AT...A.... | T [839387] ========== ====== ====== ====== ================================ ==================================== ================== 6 32 95.3 35 GTCGCACTCTACATGAGTGCGTGGATTGAAAT # Left flank : ACGTGCTGGCATCATCGAATTTCATGATGCGCTCATAATGCCTGAGACAGTAGGAGAAGCATTCAAAGTAGATGTGATGACACCACATCATTCAGACTACAACAGCGTCAAGCTAGATAAGGTGAATCAAGGGGGAAGTGTTCCAGCCCCTCGAGACGATGACTCACCAACACCGATTCATTTCTTAACGGTGGTCAACGGCCGCTTTCAACTTCTATTGAAAACAAAAAAGAATCTACCAGAAGATGCGGAATGGCTCGAACTCGCCAAAACCATCTTACTAGGCGCTTTAGAACACGAAGGAATCGGTGCTAAAACAAATGCGGGTTATGGAAGACTTAAAATGGACGATGCCATTTCATAAGACTAAGTGCGAATGTGAGGTGAACATAAAATCCCTGGAACATTCGCACCGTTTCATTCGACAAAAATGAGAAAAAATGTATATTTTTTAGGGGTGAAAACAAAATTCAAATGTTATAATTAGGGCAGAAATCGCA # Right flank : TTGTGAAAACATAACTCTGCTCCTGACTCAGTAGTCATGAATCTAATTGAATTCAATTGTTGCTGAAATATAATTAAGTATGATTAACAAGTTTCAATAGATTTCATACTAAGAAAAAGTCGGTGCGAATGTGAGGTGAACATAAAATCCTTGGAACATTCGCACCTATTCATTCGACAAAAATGAGAAAAAATGTATATTTTTAAGGGTGAAAACAAAATTCTATATAGAAACTTGTGGGTTTTGACGATCATTCCCTAAAAAATGTTATAATTAGGGCGGAAATCGCAGTCTGAGTGCGTGGATTGAAATATAAGTAATTGGAACATGGTTAACACATCCTTCTGTCGCACTCTACATGAGTGCGTGGATTGAATAACATAGACGTATTGCTCTCTAGTTCCATATTGAGTCGCACTCTATATGAGTGCGTGGATTGAAATATCATATCTTCAACCGAATTACGCAGCGTCATCAATCGCACTCTCCATGAGTGCATA # Questionable array : NO Score: 8.71 # Score Detail : 1:0, 2:3, 3:3, 4:0.76, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTACATGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: F [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.00,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //