Array 1 150313-151728 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP013739.1 Streptomyces globisporus C-1027 plasmid SGLP1, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 150313 37 100.0 35 ..................................... TCGGGATGGGCGGCCAGGTACCAGGTCATCTGCCG 150385 37 89.2 35 .......G........G...GC............... TCCGCCCGGCAGGGCACCGGTCATCCGGCGGTCCT A [150408] 150458 37 86.5 36 ...........T...GG...C....A........... CTCAGCGTCGCCCGGCGCGCCGACGACCGGCTGGTG 150531 37 94.6 35 ................G....A............... GTGCAACGCCTGTTCATCGCCGGCCAGCACCCCGA 150603 34 89.2 36 ................T......---........... GTCGAGTGGAACCCGGCGAGCCGGAGTCCGGGCAGG 150673 37 97.3 36 ...............G..................... GACCTCGTGTGGCTCTCCTGCATGGCCCTCGAGTGG 150746 37 91.9 39 ........T.......G.....A.............. CGCGTCCCCGCCCTGCAACGGGGCCTCTCGTCGACCGAG 150822 37 94.6 35 ......T.........G.................... CTGATCGCCGGAGGCACTGGCTCCGGCAAGGGGGA 150894 37 91.9 35 ............T.......C.A.............. CTGCCGCTCGTCGTCGGCGACTCGCAAGTGCTCGG 150966 37 81.1 36 ....T...........G...C..T.A....CT..... TCTCGCGTCGAGCGCGGCTATTGCCGCCTCGGACGA 151039 37 83.8 36 C............AAT....CA............... GACACGATGGACGGCGACAAGTGCATGAGGCTCTAC 151112 37 81.1 35 ............G.GA...CC.A..A........... CGCAATGCCGCCGAGGTGGTGTCGCAGCAGGCACA 151184 37 81.1 35 .GC...C.T.......GA....A.............. CGCAACCCGTGGGACCTCGGCGAGATGCGGTCCTC T [151186] 151257 37 89.2 36 ..........T.....G..A..A.............. GCGCCGATCCGGCACAGCTCGTCGTACGTGTCCTGG 151330 37 86.5 36 ........T...T...G...C.......T........ ATCCGCAACGACGCCCGTCCCGGCGGCGTCGTTGCT 151403 37 83.8 33 ...T..........T.G..AC.A.............. GTCTTGGTGACCGTGGAGTAGCCGACCAGGGTG 151473 37 86.5 37 ............T...CC..C...A............ TGCTTGTACCAACCGGCGGCCGTCAGCACGGCCGGGC 151547 37 73.0 36 .....A......T...GT.AC..........GA.G.T TACGCCCTCGTCGTCTGGATGGGCACCCACCAGCAG 151620 36 81.1 36 ....T...........-.C.G.AT............G GCTCGTACGGTGTAAGCGGCTCGGGTTAGCAGGGTG 151692 37 83.8 0 .........T...CT.T..TC................ | ========== ====== ====== ====== ===================================== ======================================= ================== 20 37 87.3 36 GTGGCGGTCGCCCTCCAGGGTGGCCGAGGATCGCAAC # Left flank : CCAGGCCGTCCGGTACGACGACGCGACCCGCACCCTGCACCTGCGTCCCTGCTCACCGGCCTACCGAACCAACTCGTTTTGCATCAGAATGAGATCTTCGCCCGCGTCAACGCAGCGGTCGGCTCGGGCACGGTGTCGTGCCTGGAGATCCTGCGGCCCGGCAATCCTCAGTATCAGGTGCCGGCGGAGAGTTCTCCGGCGTCCCTCGCGCCGCCACCGGTGGCTGGCCCAGCCCCGGGTGAGCCGCTGGTGCCCCGAGCTCGGGACCCCAGGTACCTCGAAGCCCTGGCTGCGCACCAGCAGGCGTGGTCGGGAGGGCAGGAGGCCGACCTGGTCATCCGCGCGAAGACGGAGCGGTAGATTCGCGACCGCCTCCGCGAGCCCGGGTACTTGTTCGTCGAGAGCCGCACCGAAGCTAGATGTTCGAATTCACCAGAATTGCCACCTCTAGCGGCCTCCTTTTATGAAGAGCGCTACGCTCTTTGTACTGTTCAGCCAGG # Right flank : CCTGTGGTCCGGACGCGACGTCGCCGCCTTGGGCGTGGTGGCGGTCGCCCCTCGCGTCGGTGAGCTCGGCCTCGTGGTAGTAGGACATCCAACTGCCTCCGCTGGTCGTGCACCGGTCACCTTGCTCCGGGCGGTGACCGCTTCGGCGAGGGAGACTTCCTGACGGGTCGGACAGCCGTCGTCGTCCTCGTCGACCCAGTGTTTGAAGGCATCGCGTTCATACCCGACGCGCTTCTCCTCGGCGACGGGGATCTTCCTTATGGCGTCTGCGAGGGTCAGGCCGCCCTCGTCCGGGGCTCCGCCGGGCGCGCCAGACGGTGTGGTGGTGCCGGTGGCGGAGGGATTGGGGTCGTAGGCCTCCACTGGTTCGGTGGAGCAGGCTGTCAGGGCGGCGGCGGTGAGCAGGGCGGACAGGAAGCCGATGCGGCGCAGCGAGACGAGGGCACCGCAGGATTCCGGTAAGCCGTTCACATGCCGGCTGGTGCTGCGCTGCATCGAAG # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.36, 5:-1.5, 6:0.25, 7:0.01, 8:1, 9:0.11, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGCGGTCGCCCTCCAGGGTGGCCGAGGATCGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGCGGTCGCCCTCCGGGGTGGCCGAGGATCGCAAC with 98% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-14.60,-6.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [32-51] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [45.0-23.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 153559-157223 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP013739.1 Streptomyces globisporus C-1027 plasmid SGLP1, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================================================================ ================== 153559 37 97.3 35 ...................A................. AGCCCCGACAAACGCACCGGGCTCGGCGGCTGGAC 153631 37 97.3 35 ....................C................ TGCACAACCCACCGGCCGAGAAGGGCCCGGACATG CCC [153641] 153706 36 97.3 37 .............-....................... ATGGCGTACGCGCGGGCGAACGGCCCGGCGGCGGCCG 153779 37 100.0 36 ..................................... GGGATGGGCAAGGCCGTGGCCGAGGTGATCAGCTGA 153852 37 94.6 36 ....................C.......A........ TTCATCGAGTACGCCGAGGGCGAGGCGGACAGCGTG 153925 37 86.5 35 .............GT..C..C.A.............. GCCTTCCCCGGCCAGTTCTCCGCCGTGGAGGAGCT 153997 36 94.6 35 .............-........A.............. GAGGGCCTGTGCGAGGAAGACGAGGACCCCGAGGA C [154014] 154069 36 83.8 27 .............-...A....A.....A.....TG. CGAGGTGCCGCCGCTGGTGGCCCAGGC C [154086] Deletion [154132] 154133 37 86.5 36 .....A...........A...AA.....A........ ACCGAGCCGGTCGAGTTGCCCGAGGGCTGGCTGCAG 154206 37 83.8 37 ......A.....T.......C.......AC.A..... TCGTCCATGCGGGCGAGTCCGACGTTCGGAGCCAGGT 154280 37 83.8 36 ..........T.A..GAA..C................ CCCGAGGGAATCGAGACGGTCACACTGACCGGGCAG 154353 37 91.9 8 ........A.......A...A................ CTGGGGTT Deletion [154398] 154398 37 91.9 35 .......A...T........C................ GAAACGGTGGGTGCCTGCCCCCCGGCGCAGATCAA 154470 37 97.3 35 ...................................G. CTCCTCCTTGTTCGTCACCAGGACGGGGGCAGCAC 154542 37 97.3 37 .................A................... GATGACGGGACGTACCGGTGGGGGATCGGGGGTGGCA 154616 36 97.3 35 ...................-................. CTGATCGCCTGAGGCACTGGCTCCGGCAAGGGGGA 154687 37 81.1 76 ....T.A.....T...A...CCA.............. TTCTCGACCCGGGTGGCTGCGGGGGCATCCGCAGATTGCAACCTCCGGGTGCCGCCCGGGCATCGTGGTGCACCAC 154800 36 83.8 35 .....-.CG.....T.......A..........T... CTTGTCGAGCGTCATGGGGATTTTGGGGAGCGCGG 154871 37 91.9 36 .........A..........C....A........... GTCTCCAGGACCGCGTACGCCGCCATGCGCCTGGTC 154944 37 70.3 36 ........TA....T.AA..C.A.TCC.........T ACCACCGGCACCGGGTCCGCTCAGCTGGAGGGGGTC 155017 37 100.0 36 ..................................... ACCGCTCCCGAGGGTGACGAGGCGGCCATGCAGGGC 155090 37 91.9 27 ................A...C.A.............. CACCCCATGTAAACGCCGATCGGCGGC Deletion [155154] 155154 37 86.5 36 ...........T.......TC.A......G....... AACGACGCCGTGATCAACGGTGACACGGCGGTCGAC 155227 37 91.9 35 ...............A....C........G....... CTGGAACCCAAGGGCAACGACGCCGTCGTCCCGCT 155299 37 97.3 36 ........T............................ GTCCGCAACGACGCCCGTCCCGGCGGCGTCGTTGCT 155372 37 100.0 36 ..................................... CACATGCGGATGTTCATCGAGGGCCAGAAGTGCGCG 155445 37 97.3 38 .........................A........... TTTCGATGCCGTCCGTAGGGACACCCCCCCGCATCGGC 155520 37 97.3 36 ............T........................ GACTCCCGCATCCTGGCCCGCTTCAACTGGACGGAT 155593 37 100.0 36 ..................................... CAGTCCATCGCGCACGGCCGGGACCGGGCCGCCGTC 155666 36 97.3 34 ................-.................... CCTCCACCAACGCGAGTGGCAGGTACGACGTCGC 155736 37 100.0 35 ..................................... CTCGGCGAGCAGGCCGCCGCGCAACTCGCCCCGCA 155808 37 100.0 35 ..................................... GGCGAAGGCGCGGACGCCGGCTGGGTCAGCATCAA 155880 37 91.9 35 ............................C.C.A.... GCGTTCGCGGTAACCAGACGCACGCCGACCAGTTG 155952 37 86.5 35 .......C..T.....A...G.A.............. CGATATCGGAGTCCCGGCTCCGGGGCGAAGTACCC 156024 37 94.6 37 ...........T........C................ CTGTACGCCGACGGAGGGGACGGAGGCGGTTTCGGAT A [156053] 156099 36 91.9 36 ..............-.....G.A.............. TCCATGACGCAGTTCCGGGCCGACGTTCGCGCCCAG 156171 37 89.2 33 ...........T........CAA.............. GACGTAGGTCTGGCCGTGGGCCTCAGGCACGGG 156241 37 94.6 37 ....................C............T... GGGCTCCTCATGCGGCAGGTGCACGGCCTGGTGGCCG 156315 37 97.3 36 ................A.................... GCCAGCTGGACCGAGATCGAGCGAGAGGGATACCGC 156388 37 94.6 38 .................C..........C........ ATCAACACGCGGATGGTCGAGGGCGTCAAGTACAGCGA 156463 37 83.8 35 ...T........T...A...C.A...T.......... GACTACTGCGTCGAGGCCGACTGGCTGACTCCGGT 156535 37 73.0 36 ........TA....T.AA..C.A.TCC.......... ACCACCGGCACCGGGTCCGCGCAGCTGGAGGGAGTC 156608 37 91.9 36 ................A...C..............G. ATCGAGCACACCCAGCTGTGCCCCCCGTGCCGGAAG 156681 37 86.5 35 ...A.....A......A...C.A.............. TCCGCGTACCAGGGGCGCAGGCCGATCTGGACGAC 156753 37 91.9 37 ..............T.A...C................ AGCCGCCGCCTGTACCGAGGCTAGGACGGGACGCGGT 156827 37 86.5 36 ........T.....G.C...C..........G..... GACAAGAAGGTCCCGGGGGCGTGGCTCGTCGACCTG 156900 37 86.5 37 ..............T....AC.A......G....... ATTCCGATCGTGCACGTACTGAGTACCGTGCCGCCGG 156974 37 91.9 35 ...A.......T..........A.............. AACGTCCGGGAAGCCGACATCAGCGAGACGACGAA 157046 37 91.9 36 ..........A.......A.C................ GCGTTCAAGCTCGACGACGTCGACAGGGCGCAGGTC 157119 37 83.8 31 ...........T......A.CA...A.....T..... GTCCCGTCCTTGTACGTGGACAGCGCTGCGG 157187 37 75.7 0 ....T......GT.A....AC.A...C.A........ | ========== ====== ====== ====== ===================================== ============================================================================ ================== 51 37 91.2 36 GTGGCGGTCGCCCTCCGGGGTGGCCGAGGATCGCAAC # Left flank : TCGTGCAGTGCAAGCTTCGCAGGGCGCCGTCGGCTGCGATCGGAGCGCCGGATGTGCAGGCTTTCAACGGGACAGCCCGCCCCGACCATGACGCCACCCACCCGATCATGGTGACGAACACACGCTTCACCGTGCACGCGGAGAAGGCAGCAGCCAGGTATGGAATCGCGTTGGTGGACAGCATGGTGCTGCGGGCGTGGGCGACGTTCGGCAAGCCCCTCGAGCTGAACTGACAAGCCGCCGGGGTTAGACGATATGGACGCCGGCGGTGTCGCCGTTCTCGTCGCGTAGGAGCACTTCTCTTCCGTCGGCCACCAGCCAGCTGGGGGAGGAGGCGTAGACCTGGACGGCCCGGTTGATGGAATCGGTTTTGGACAGGCCGGTGATCCTCATGAGTGTGGTGACCGTTTGGGCTGCCCTGGGAATGAGTGTGACGTGAACCGCCGCTGGCCGAGGATCGCAACGACACCCACGGCGTGGCCCAGGCCGAGCGGGGCGTG # Right flank : CGGCTGTGTCAGTGGCCAATCTTAGGGTGTGTCGGTTCCAGGGAGGTTGGTGATTCGGCGGTCAGGAGGTCGGGTGTCAGAGCGTGGGTTGTTCGCCCATAGTCGTAGTCCGCGGTCGGGGTGTCGGCATCGGCTCGAGGATCATCTGCGTGGCTCGGCTGCTTTGGCCAGGGTCTTTGCCGAGCGTTTTGGTGCTGAGGATGTGGCCGGGTACCTGGCGTTGGTGCATGACGTGGGGAAGGGGTGTTGTGCCTGGCAGGATCGCTTGATCTTTCATGCTGAGCCGACGGGTAAGCCGGTGGGGATCCCGCATAAGGAAGCCGGCACGGTGCTTGCTGCGCGGACGGTGGGGCGTCAGCTCGCTGCTGTGGTGCAGGGGCATCATGGAGGGCTGCCGGATCAGGACAAGATCAAGGATCTTCTGGCCGAGCTCCGGGGGAGCGGTGTGGAGGCGGACCGTGCTCGGGAGGCGACCGAGGCTGTGGCCCGGGTGGTGCCGG # Questionable array : NO Score: 4.87 # Score Detail : 1:0, 2:3, 3:0, 4:0.56, 5:0, 6:0.25, 7:-0.09, 8:1, 9:0.15, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGCGGTCGCCCTCCGGGGTGGCCGAGGATCGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGCGGTCGCCCTCCGGGGTGGCCGAGGATCGCAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-16.50,-6.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [67-78] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [21.7-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.64 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //