Array 1 223003-221326 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAIMIQ010000003.1 Klebsiella pneumoniae strain WHC49 NODE_3, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 223002 29 100.0 32 ............................. CGATCGTCAATCTCTGGCAAGCGCTGAAAATT 222941 29 100.0 32 ............................. CCAAATGGGAGCATTTATCTTTTCGCCGGTCA 222880 29 100.0 32 ............................. AGACTAATTATATACACACTTAATCCTGAGTC 222819 29 100.0 32 ............................. CGCCGGTCAGTGGTCAGGCAGGAAAAAAGCAG 222758 29 100.0 32 ............................. TCATTTCTGACGCGAATGGCCGACATGCTGGG 222697 29 100.0 32 ............................. GAAATTAATCGCCCGTCTTCGCAGTCCTGCAA 222636 29 100.0 32 ............................. GCCAGTAGTTTTATTTCGAAATGCATTTCATT 222575 29 100.0 32 ............................. TAACCCACCGCAATTACGCGAATTAAACCCCA 222514 29 100.0 32 ............................. TAACGTCGCGGTGCGTCATCTCATCGGCAGTG 222453 29 100.0 32 ............................. TTGAGTTCGGGTCACGCCGCCGGGGTTGAGAG 222392 29 100.0 32 ............................. GCCTTTTCCGTTTTGCCGAAGAGTGTTGCGAA 222331 29 100.0 32 ............................. GATTATGCAAAACGACTTAGAGCCATAAGAAA 222270 29 100.0 32 ............................. TTTTCGGAATTACTGCGAGCGAGAGAGTGTCG 222209 29 100.0 32 ............................. GCTGCGTTGCCGTATTTACTCGCAGCGGCGGC 222148 29 100.0 32 ............................. GAAGTTAGCGATTATTTTTTACTGGAGAAACA 222087 29 100.0 32 ............................. TGACAACCAGATCCGAAAATCCTGGAGCCGGG 222026 29 100.0 32 ............................. GAGGGGCCATGGAGCCGGTGTTGATTGCGTCC 221965 29 100.0 32 ............................. CGATTGTCGGTGGTTGTCTGCTGGTATCTGCT 221904 29 100.0 33 ............................. CGCCGGTCAGTGGTCAGGCAGGAAAAAAGCAGC 221842 29 100.0 32 ............................. GCGTTGTCGTCTAACCCGTCTAACCTGCGCGG 221781 29 100.0 32 ............................. CAGGGTCGCCGTATCCTTCGCCAGATGGCGGA 221720 29 100.0 32 ............................. TTACAAATCGCCTCGGGTGGTGCTCTGAAATA 221659 29 100.0 32 ............................. GAAATTCTGATTTTTTTACCGTGGATTTCCAC 221598 29 100.0 32 ............................. GCTATGGGAGTTAATGACATGGAACAGAAATT 221537 29 100.0 32 ............................. GCTCTTCTTCCTCCGCGAGTTCTGCATACGTG 221476 29 100.0 32 ............................. GATTCTAATTGACGTTGTAATAATCGTGTGTG 221415 29 100.0 32 ............................. ACTGATATCACCGAACTGGCTCGGGCCATGAA 221354 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================= ================== 28 29 99.1 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : GTCCACTAACGTTATCGATCCGGAGGGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTGGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATTC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [48.3-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //