Array 1 1711153-1712637 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP009557.1 Clostridium perfringens strain FORC_003 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 1711153 35 80.6 30 AAC...-..ATA........................ AGAGCTTTAGAAGAAGAGAATGCAAAACTT 1711218 36 100.0 30 .................................... GGATGGACTTTATTTGGCAAGAAAGTTTAT 1711284 36 100.0 30 .................................... GGTCTTAAAATAGGTTCGATTTTATATTAC 1711350 36 100.0 30 .................................... GGTAACATTACAAGTATCTGTATTGGTGAA 1711416 36 100.0 30 .................................... GGAGGAACTATGGACAAGACATTATTTAAA 1711482 36 100.0 30 .................................... ATTGTAATTTTTTTATTTAAATATTTTTCT 1711548 36 100.0 30 .................................... TTGCAATTGCTAAACAAGAGGGAAAATATA 1711614 36 100.0 30 .................................... GGCTATATTCAAGATTCATCTGTTAAAAGT 1711680 36 100.0 30 .................................... CCTTTAGGAGCTTATGAATTATCAATTCAA 1711746 36 100.0 30 .................................... CCAGTTGGACTTGTATCTGTAGGATTTAGA 1711812 36 100.0 30 .................................... GGGCAACTCTAAGGGCAAGAGTGGTGGTGC 1711878 36 100.0 30 .................................... CTAATACAACTGCAATAATCTTTTGGCTAA 1711944 36 100.0 30 .................................... GAGGATGGAATTGTTGAGAATATAGAATGT 1712010 36 100.0 30 .................................... GCTTTTGATGCAGATACTATTTATATTTTA 1712076 36 100.0 30 .................................... TATAGCAAATATCAAAGTTGTGGATATACA 1712142 36 100.0 30 .................................... AACTTTAATACAATGGAGTATAACTCGATT 1712208 36 100.0 29 .................................... GCTAATACAATCTTTCCCGCACCTTCCCA 1712273 36 100.0 30 .................................... ATGCAAGGAATGGAGCATACTATCCAATTC 1712339 36 100.0 30 .................................... TTTCAATATGTCTCCGACGGCACTCGCCGT 1712405 36 100.0 30 .................................... GCACCACCGACTACACTAGGAACATCAGTA 1712471 36 100.0 30 .................................... CATGCCCCTTTATTTATCTGTAGGACTTAA 1712537 36 100.0 29 .................................... CTTGGGGTGATGTAGGTTCTATAGATAAA 1712602 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 23 36 99.2 30 GTTATAGTTCCTAGTAAATTCTCGATATGCTATAAT # Left flank : TTCTAAAAGCAGCAAGTCTATCCTTATTCTTAAAGAAAGTATTGTAAAAAGTAAATGCTTCCTTAAGATAAGGATTATTAACTTTCAATTCTCTCATAATAACAGTAGCTCTATCTGTAGAAAATTCCTCACTATAAGATAAAATATCATAAAGCCAATCTTCCTGTGGTTTAGGTTTTTTCATATTAGAATAAACTAGAATATTTCCATCTACATTTTCTTTTTCTATATGATATTTAGTATAAAAAGCATTGTTATCATTTAACTTAATAAGCTCAACACCCTCTAAATCAAATTCATCTATCTCTTCAGTAAAATCCTCATTTTCATCATACCAGAAAACAATATGACGTACTTTTCCATCACCTAATGGTTTTGAAAAAATATCATTAAGGAAATTCTTAATTTCTTTTAAGTTCATTTGTCACCTCTAAATAAAATTTTATAAATATTTTTTAAATTAATATATAATAATATAATAACTTAAAATTAATAAAATT # Right flank : TAGGAACTAATGAACCCCTTGAAACAACTAATTTCAAGGGGTTTTTACTTTCTAAAAAACATTCAATTGTCGTGAATTTATCTTCTTTTCCTGCTTTTTTGGTGATCCTACTAAGAATTTCATTTCTGTATATTGCTTTTCTGTAATCTGAAGATATCTTACTGATCCTTTTGGTGGTAAATTTTCTTTTAGTCTTGCTACATGTTTATTTACTCCATCAATACCATTACATATTCTTGAGTAAACAGAAAACTGAATCATTAAATACCCATCATTTAATAAAAATCTTCTAAAATTTTGATATTCTTTTCTATCTTCTTTTTCAACAACTGGCAAATCAAAAAATACAAGTATTCTCATAAACTTTTTACTCATAATAATGATATTCCAAAGGCTTTATCTCTGGTAATTTTAATAATCTAAAATCTTTTTTACTGCAAGCTGTTGTATAAGAAGATATCATTTTATCAATTCCATTTAAAATAGAATGATTTTTTCCA # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTATAGTTCCTAGTAAATTCTCGATATGCTATAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: F [matched GTTATAGTTCCTAGTAAATTCTCGATATGCTATAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.20,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [98.3-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.77,0.41 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //