Array 1 2847498-2846373 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_NGTR01000001.1 Klebsiella pneumoniae strain UCI106 scaffold00001, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                  	Insertion/Deletion
==========	======	======	======	=============================	=================================	==================
   2847497	    29	 100.0	    32	.............................	GATTGTCTGACAGATAATGCAGCGCAATGCGC 	
   2847436	    29	 100.0	    32	.............................	ATGTGAATTTCCTGGCCGGTTGGTAGTTTGAA 	
   2847375	    29	 100.0	    32	.............................	TACTGAAACGGGTAATCAGCACAAATACCAAA 	
   2847314	    29	 100.0	    32	.............................	CATCGCTTTATGCCGAAATGAGGATGATAGTG 	
   2847253	    29	 100.0	    33	.............................	GAGCTTTCCTCCTCGTATCACTACCGCGCAGAC	
   2847191	    29	 100.0	    32	.............................	ATCAATTCCCTCATTTTTTTTCCTTTAGCTCG 	
   2847130	    29	 100.0	    32	.............................	AGGGTTTCGATTTTATCGGGATAGAAATGAAT 	
   2847069	    29	 100.0	    32	.............................	TGGCGGACGTTGTACCTGTGAGTTAATTCTTC 	
   2847008	    29	 100.0	    32	.............................	ACCGCTCCTCTGACGCCAGGAGGGTGTAGGAG 	
   2846947	    29	 100.0	    32	.............................	CTCGGATAAAATGCCTTGCATGAGGCGAACGA 	
   2846886	    29	 100.0	    32	.............................	GCGTCCAGTTGAACCCGGCACATTCCCGCTGG 	
   2846825	    29	 100.0	    32	.............................	TACGCAGCCGGATCCAGGAGCGCATGGACGCT 	
   2846764	    29	 100.0	    32	.............................	GCACGATATTCAGCATCATCAGGACGGTTCAT 	
   2846703	    29	 100.0	    32	.............................	ACCTACCAGATCCACACCGGGCGCTGCGAAGA 	
   2846642	    29	 100.0	    32	.............................	TCACGCCCAGGGCTTCCTTTGCGTTCCGAAAA 	
   2846581	    29	  96.6	    32	........T....................	CCCCGTCGTCATTCGCGCATTCTGCGCACAGA 	
   2846520	    29	  96.6	    32	.....A.......................	TGCGTCACGACGCCGGCGACAGTGACATCGTC 	
   2846459	    29	 100.0	    29	.............................	GGGTTCACTTGGGTGAAACTGAACTAACT    	
   2846401	    29	  75.9	     0	...........ATTC...A......G..C	|                                	
==========	======	======	======	=============================	=================================	==================
        19	    29	  98.4	    32	GTGTTCCCCGCGCCAGCGGGGATAAACCG	                                 	       

# Left flank :   CCGCTGTGGGATCAGGGCTATCTCTCGGTAGGCGATACCCACACCACCCGCAAGTGGGAGCCGGGCATGGCAGAAGAAGAGACCCGGTTCTTCGGGCTTAAACGCGAGTGCGGATTGCACGAGGGTTAAGCGCGGTTGTTTCCTCTATTATTTAATCCCGGTCATTCCGGGATTTTTTATATTTAAAAACTATATCCTTATTTTATTAATTCAGTGAATGTAGCCCATTATTTTATATGCGTTAATAATAAACAACTATCTTGAGTTATATCATTTTTAAATTGGCTTAAAAGCGTACATTATCAGTTCACTGTCGATTCTGCACTGGACATGCTGTGTCAATTTATAACTACTGGGGTAAAACTCGCCAGGGAGAACCCGGCGGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAGTAGTACCGC
# Right flank :  GTCCACTAACGTTATCGATCCTGAGGGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTGGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATATAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATTC

# Questionable array : NO	 Score: 6.18
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTGTTCCCCGCGCCAGCGGGGATAAACCG
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [4,5] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-12.00,-13.50] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [9-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [50.0-8.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.27,5.65   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
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